RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 ZPBP2Q6X784 338 aa17.12■□□□□ 0.33
ITGB1-204ENST00000417122 HAUS6Q7Z4H7 955 aa17.12■□□□□ 0.33
ITGB1-204ENST00000417122 C12orf76Q8N812 135 aaPredicted RBP17.12■□□□□ 0.33
ITGB1-204ENST00000417122 HASPINQ8TF76 798 aa17.12■□□□□ 0.33
ITGB1-204ENST00000417122 RPGRIP1Q96KN7 1286 aa17.12■□□□□ 0.33
ITGB1-204ENST00000417122 B3GALT6Q96L58 329 aa17.12■□□□□ 0.33
ITGB1-204ENST00000417122 FBXL18Q96ME1 805 aa17.12■□□□□ 0.33
ITGB1-204ENST00000417122 ACAP3Q96P50 834 aa17.12■□□□□ 0.33
ITGB1-204ENST00000417122 PPP1R10Q96QC0 940 aaKnown RBP17.12■□□□□ 0.33
ITGB1-204ENST00000417122 ZHX3Q9H4I2 956 aa17.12■□□□□ 0.33
ITGB1-204ENST00000417122 PARVGQ9HBI0 331 aa17.12■□□□□ 0.33
ITGB1-204ENST00000417122 RXFP1Q9HBX9 757 aa17.12■□□□□ 0.33
ITGB1-204ENST00000417122 ANKFY1Q9P2R3 1169 aa17.12■□□□□ 0.33
ITGB1-204ENST00000417122 CDH22Q9UJ99 828 aa17.12■□□□□ 0.33
ITGB1-204ENST00000417122 SF3B1O75533 1304 aaKnown RBP eCLIP17.12■□□□□ 0.332e-9■■■■■ 80.4
ITGB1-204ENST00000417122 CITO14578 2027 aa17.11■□□□□ 0.33
ITGB1-204ENST00000417122 LOC730098B7Z3J9 87 aa17.11■□□□□ 0.33
ITGB1-204ENST00000417122 TEX28O15482 410 aa17.11■□□□□ 0.33
ITGB1-204ENST00000417122 DCXO43602 365 aa17.11■□□□□ 0.33
ITGB1-204ENST00000417122 ADH1AP07327 375 aa17.11■□□□□ 0.33
ITGB1-204ENST00000417122 NASPP49321 788 aaPredicted RBP17.11■□□□□ 0.33
ITGB1-204ENST00000417122 NOLC1Q14978 699 aaKnown RBP eCLIP17.11■□□□□ 0.33
ITGB1-204ENST00000417122 RRAGBQ5VZM2 374 aa17.11■□□□□ 0.33
ITGB1-204ENST00000417122 ALKAL1Q6UXT8 129 aa17.11■□□□□ 0.33
ITGB1-204ENST00000417122 RNF135Q8IUD6 432 aa17.11■□□□□ 0.33
ITGB1-204ENST00000417122 GPR65Q8IYL9 337 aa17.11■□□□□ 0.33
ITGB1-204ENST00000417122 KRI1Q8N9T8 703 aaKnown RBP17.11■□□□□ 0.33
ITGB1-204ENST00000417122 KCNN1Q92952 543 aa17.11■□□□□ 0.33
ITGB1-204ENST00000417122 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.11■□□□□ 0.33
ITGB1-204ENST00000417122 STK17AQ9UEE5 414 aa17.11■□□□□ 0.33
ITGB1-204ENST00000417122 PLXNA3P51805 1871 aa17.11■□□□□ 0.33
ITGB1-204ENST00000417122 C5orf42Q9H799 3197 aa17.1■□□□□ 0.33
ITGB1-204ENST00000417122 SMIM28A0A1B0GU29 152 aa17.1■□□□□ 0.33
ITGB1-204ENST00000417122 SPDYE4A6NLX3 237 aa17.1■□□□□ 0.33
ITGB1-204ENST00000417122 K7ENM7 598 aa17.1■□□□□ 0.33
ITGB1-204ENST00000417122 CLDN3O15551 220 aa17.1■□□□□ 0.33
ITGB1-204ENST00000417122 TRAK2O60296 914 aa17.1■□□□□ 0.33
ITGB1-204ENST00000417122 TBCAO75347 108 aaKnown RBP17.1■□□□□ 0.33
ITGB1-204ENST00000417122 PDIA4P13667 645 aaKnown RBP17.1■□□□□ 0.33
ITGB1-204ENST00000417122 SCP2P22307 547 aa17.1■□□□□ 0.33
ITGB1-204ENST00000417122 MTHFRP42898 656 aa17.1■□□□□ 0.33
ITGB1-204ENST00000417122 STK38Q15208 465 aa17.1■□□□□ 0.33
ITGB1-204ENST00000417122 XKR4Q5GH76 650 aa17.1■□□□□ 0.33
ITGB1-204ENST00000417122 KANK3Q6NY19 840 aa17.1■□□□□ 0.33
ITGB1-204ENST00000417122 RIN2Q8WYP3 895 aaPredicted RBP17.1■□□□□ 0.33
ITGB1-204ENST00000417122 BICD1Q96G01 975 aa17.1■□□□□ 0.33
ITGB1-204ENST00000417122 RIPOR3Q96MK2 946 aa17.1■□□□□ 0.33
ITGB1-204ENST00000417122 UROC1Q96N76 676 aa17.1■□□□□ 0.33
ITGB1-204ENST00000417122 ZNF396Q96N95 335 aaPredicted RBP17.1■□□□□ 0.33
ITGB1-204ENST00000417122 NECTIN4Q96NY8 510 aa17.1■□□□□ 0.33
ITGB1-204ENST00000417122 SFXN1Q9H9B4 322 aa17.1■□□□□ 0.33
ITGB1-204ENST00000417122 GPR37L1O60883 481 aa17.09■□□□□ 0.33
ITGB1-204ENST00000417122 WEE2P0C1S8 567 aa17.09■□□□□ 0.33
ITGB1-204ENST00000417122 MATR3P43243 847 aaKnown RBP eCLIP17.09■□□□□ 0.331e-6■■■■□ 21.4
ITGB1-204ENST00000417122 CLCNKBP51801 687 aa17.09■□□□□ 0.33
ITGB1-204ENST00000417122 MCL1Q07820 350 aa17.09■□□□□ 0.33
ITGB1-204ENST00000417122 TMEM31Q5JXX7 168 aa17.09■□□□□ 0.33
ITGB1-204ENST00000417122 RTP2Q5QGT7 225 aa17.09■□□□□ 0.33
ITGB1-204ENST00000417122 FAM171A1Q5VUB5 890 aa17.09■□□□□ 0.33
ITGB1-204ENST00000417122 FOXD4L5Q5VV16 416 aaPredicted RBP17.09■□□□□ 0.33
ITGB1-204ENST00000417122 TMC5Q6UXY8 1006 aa17.09■□□□□ 0.33
ITGB1-204ENST00000417122 CEP57Q86XR8 500 aa17.09■□□□□ 0.33
ITGB1-204ENST00000417122 LINC00301Q8NCQ3 95 aa17.09■□□□□ 0.33
ITGB1-204ENST00000417122 FOXD4L4Q8WXT5 416 aaPredicted RBP17.09■□□□□ 0.33
ITGB1-204ENST00000417122 SNX27Q96L92 541 aa17.09■□□□□ 0.33
ITGB1-204ENST00000417122 POMKQ9H5K3 350 aa17.09■□□□□ 0.33
ITGB1-204ENST00000417122 GOLGA2P5Q9HBQ8 144 aa17.09■□□□□ 0.33
ITGB1-204ENST00000417122 C11orf16Q9NQ32 467 aa17.09■□□□□ 0.33
ITGB1-204ENST00000417122 MAN1C1Q9NR34 630 aa17.09■□□□□ 0.33
ITGB1-204ENST00000417122 SLC38A7Q9NVC3 462 aa17.09■□□□□ 0.33
ITGB1-204ENST00000417122 FNIP2Q9P278 1114 aa17.09■□□□□ 0.33
ITGB1-204ENST00000417122 TFIP11Q9UBB9 837 aaKnown RBP17.09■□□□□ 0.33
ITGB1-204ENST00000417122 MUTYHQ9UIF7 546 aa17.09■□□□□ 0.33
ITGB1-204ENST00000417122 TBX20Q9UMR3 447 aa17.09■□□□□ 0.33
ITGB1-204ENST00000417122 PDCD11Q14690 1871 aaKnown RBP17.08■□□□□ 0.33
ITGB1-204ENST00000417122 TMEM189-UBE2V1I3L0A0 370 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 B3GAT3O94766 335 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 GLUD1P00367 558 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 LIG4P49917 911 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 CREMQ03060 361 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 SOX4Q06945 474 aaPredicted RBP17.08■□□□□ 0.32
ITGB1-204ENST00000417122 ELAVL2Q12926 359 aaKnown RBP17.08■□□□□ 0.32
ITGB1-204ENST00000417122 UPP1Q16831 310 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 SEZ6Q53EL9 994 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 ATAT1Q5SQI0 421 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 DCLRE1AQ6PJP8 1040 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 PRSS55Q6UWB4 352 aaPredicted RBP17.08■□□□□ 0.32
ITGB1-204ENST00000417122 CCDC73Q6ZRK6 1079 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 SV2BQ7L1I2 683 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 DYMQ7RTS9 669 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 GLYCTKQ8IVS8 523 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 SPRYD3Q8NCJ5 442 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 ZMAT2Q96NC0 199 aaKnown RBP17.08■□□□□ 0.32
ITGB1-204ENST00000417122 FIZ1Q96SL8 496 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 LRFN3Q9BTN0 628 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 TTPALQ9BTX7 342 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 HAPLN2Q9GZV7 340 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 CNTN3Q9P232 1028 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 DPP7Q9UHL4 492 aa17.08■□□□□ 0.32
ITGB1-204ENST00000417122 MTCL1Q9Y4B5 1905 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms