RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SCN5AQ14524 2016 aa15.77■□□□□ 0.12
SGCE-202ENST00000415788 DNAH12Q6ZR08 3092 aa15.77■□□□□ 0.12
SGCE-202ENST00000415788 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.77■□□□□ 0.11
SGCE-202ENST00000415788 GOLGA6L9A6NEM1 432 aa15.77■□□□□ 0.11
SGCE-202ENST00000415788 TULP2O00295 520 aa15.77■□□□□ 0.11
SGCE-202ENST00000415788 OGTO15294 1046 aa15.77■□□□□ 0.11
SGCE-202ENST00000415788 EOMESO95936 686 aa15.77■□□□□ 0.11
SGCE-202ENST00000415788 AMHP03971 560 aa15.77■□□□□ 0.11
SGCE-202ENST00000415788 RPL13P26373 211 aaKnown RBP15.77■□□□□ 0.11
SGCE-202ENST00000415788 ZCWPW2Q504Y3 356 aa15.77■□□□□ 0.11
SGCE-202ENST00000415788 KLHL10Q6JEL2 608 aa15.77■□□□□ 0.11
SGCE-202ENST00000415788 ZBTB33Q86T24 672 aa15.77■□□□□ 0.11
SGCE-202ENST00000415788 ECHDC2Q86YB7 292 aa15.77■□□□□ 0.11
SGCE-202ENST00000415788 SLC9A9Q8IVB4 645 aa15.77■□□□□ 0.11
SGCE-202ENST00000415788 ZBTB45Q96K62 511 aaPredicted RBP15.77■□□□□ 0.11
SGCE-202ENST00000415788 GDF15Q99988 308 aa15.77■□□□□ 0.11
SGCE-202ENST00000415788 IKZF4Q9H2S9 585 aa15.77■□□□□ 0.11
SGCE-202ENST00000415788 SEMA6BQ9H3T3 888 aa15.77■□□□□ 0.11
SGCE-202ENST00000415788 KIAA1586Q9HCI6 787 aa15.77■□□□□ 0.11
SGCE-202ENST00000415788 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.77■□□□□ 0.11
SGCE-202ENST00000415788 RWDD2AQ9UIY3 292 aa15.77■□□□□ 0.11
SGCE-202ENST00000415788 AGO2Q9UKV8 859 aaKnown RBP15.77■□□□□ 0.11
SGCE-202ENST00000415788 IPPQ9Y573 584 aa15.77■□□□□ 0.11
SGCE-202ENST00000415788 TISP43B9A030 160 aa15.76■□□□□ 0.11
SGCE-202ENST00000415788 ZSCAN12O43309 604 aa15.76■□□□□ 0.11
SGCE-202ENST00000415788 STAG3L1P0CL83 205 aa15.76■□□□□ 0.11
SGCE-202ENST00000415788 GRM5P41594 1212 aa15.76■□□□□ 0.11
SGCE-202ENST00000415788 PLA2G4AP47712 749 aa15.76■□□□□ 0.11
SGCE-202ENST00000415788 WDR5P61964 334 aaKnown RBP15.76■□□□□ 0.11
SGCE-202ENST00000415788 POU5F1Q01860 360 aaKnown RBP15.76■□□□□ 0.11
SGCE-202ENST00000415788 MRPL10Q7Z7H8 261 aaKnown RBP15.76■□□□□ 0.11
SGCE-202ENST00000415788 TXLNBQ8N3L3 684 aa15.76■□□□□ 0.11
SGCE-202ENST00000415788 RSPH1Q8WYR4 309 aa15.76■□□□□ 0.11
SGCE-202ENST00000415788 CBWD1Q9BRT8 395 aa15.76■□□□□ 0.11
SGCE-202ENST00000415788 UBN1Q9NPG3 1134 aa15.76■□□□□ 0.11
SGCE-202ENST00000415788 TMEM161AQ9NX61 479 aa15.76■□□□□ 0.11
SGCE-202ENST00000415788 PCDH10Q9P2E7 1040 aa15.76■□□□□ 0.11
SGCE-202ENST00000415788 CTNND2Q9UQB3 1225 aa15.76■□□□□ 0.11
SGCE-202ENST00000415788 NR3C1P04150 777 aa15.76■□□□□ 0.11
SGCE-202ENST00000415788 HARSP12081 509 aaKnown RBP15.76■□□□□ 0.11
SGCE-202ENST00000415788 FANCCQ00597 558 aa15.76■□□□□ 0.11
SGCE-202ENST00000415788 NCAPHQ15003 741 aa15.76■□□□□ 0.11
SGCE-202ENST00000415788 NPAS4Q8IUM7 802 aa15.76■□□□□ 0.11
SGCE-202ENST00000415788 SMG8Q8ND04 991 aaKnown RBP15.76■□□□□ 0.11
SGCE-202ENST00000415788 UBE2OQ9C0C9 1292 aaKnown RBP15.76■□□□□ 0.11
SGCE-202ENST00000415788 HAPLN2Q9GZV7 340 aa15.76■□□□□ 0.11
SGCE-202ENST00000415788 HSPBP1Q9NZL4 362 aa15.76■□□□□ 0.11
SGCE-202ENST00000415788 PCDHB7Q9Y5E2 793 aa15.76■□□□□ 0.11
SGCE-202ENST00000415788 ZBBXA8MT70 800 aa15.75■□□□□ 0.11
SGCE-202ENST00000415788 HOXA2O43364 376 aa15.75■□□□□ 0.11
SGCE-202ENST00000415788 TADA3O75528 432 aa15.75■□□□□ 0.11
SGCE-202ENST00000415788 CLTAP09496 248 aa15.75■□□□□ 0.11
SGCE-202ENST00000415788 NR2F2P24468 414 aa15.75■□□□□ 0.11
SGCE-202ENST00000415788 BMP8BP34820 402 aa15.75■□□□□ 0.11
SGCE-202ENST00000415788 FKBP3Q00688 224 aaKnown RBP15.75■□□□□ 0.11
SGCE-202ENST00000415788 ANKRD40Q6AI12 368 aa15.75■□□□□ 0.11
SGCE-202ENST00000415788 TTI2Q6NXR4 508 aa15.75■□□□□ 0.11
SGCE-202ENST00000415788 ZNF598Q86UK7 904 aaKnown RBP15.75■□□□□ 0.11
SGCE-202ENST00000415788 THNSL1Q8IYQ7 743 aa15.75■□□□□ 0.11
SGCE-202ENST00000415788 GPD1LQ8N335 351 aa15.75■□□□□ 0.11
SGCE-202ENST00000415788 XXYLT1Q8NBI6 393 aa15.75■□□□□ 0.11
SGCE-202ENST00000415788 PHOSPHO2Q8TCD6 241 aa15.75■□□□□ 0.11
SGCE-202ENST00000415788 NXF3Q9H4D5 531 aaKnown RBP15.75■□□□□ 0.11
SGCE-202ENST00000415788 TOPORSQ9NS56 1045 aaPredicted RBP15.75■□□□□ 0.11
SGCE-202ENST00000415788 DMAC2Q9NW81 257 aa15.75■□□□□ 0.11
SGCE-202ENST00000415788 LRFN2Q9ULH4 789 aa15.75■□□□□ 0.11
SGCE-202ENST00000415788 ERICH4A6NGS2 130 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 CLIC2O15247 247 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 EXTL3O43909 919 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 FAM189A1O60320 539 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 ITGA4P13612 1032 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 PMS1P54277 932 aaKnown RBP15.74■□□□□ 0.11
SGCE-202ENST00000415788 YARSP54577 528 aaKnown RBP15.74■□□□□ 0.11
SGCE-202ENST00000415788 RASIP1Q5U651 963 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.74■□□□□ 0.11
SGCE-202ENST00000415788 TOP1MTQ969P6 601 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 FBXL18Q96ME1 805 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 ACAP3Q96P50 834 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 SLC9A7Q96T83 725 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 FRMD4BQ9Y2L6 1034 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 GIT1Q9Y2X7 761 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 SLC4A7Q9Y6M7 1214 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 TET1Q8NFU7 2136 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 TRIM49BA6NDI0 452 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 CETN3O15182 167 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 EXOC3O60645 756 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 FGFR1OPO95684 399 aaKnown RBP15.74■□□□□ 0.11
SGCE-202ENST00000415788 ATF7P17544 494 aaPredicted RBP15.74■□□□□ 0.11
SGCE-202ENST00000415788 CYP2J2P51589 502 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 GPS2Q13227 327 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 ADAM9Q13443 819 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 TRIM65Q6PJ69 517 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 ZC3H3Q8IXZ2 948 aaKnown RBP15.74■□□□□ 0.11
SGCE-202ENST00000415788 CRIPAKQ8N1N5 446 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 UBXN6Q9BZV1 441 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 PCIF1Q9H4Z3 704 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 ST7Q9NRC1 585 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 CPSF3Q9UKF6 684 aaKnown RBP15.74■□□□□ 0.11
SGCE-202ENST00000415788 HES2Q9Y543 173 aa15.74■□□□□ 0.11
SGCE-202ENST00000415788 CSGALNACT2Q8N6G5 542 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms