RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 NASPP49321 788 aaPredicted RBP28.83■■■□□ 2.21
VEGFA-207ENST00000413642 ZNF131P52739 623 aa28.83■■■□□ 2.21
VEGFA-207ENST00000413642 TPRNQ4KMQ1 711 aa28.83■■■□□ 2.21
VEGFA-207ENST00000413642 HAPLN2Q9GZV7 340 aa28.83■■■□□ 2.21
VEGFA-207ENST00000413642 ADAM7Q9H2U9 754 aa28.83■■■□□ 2.21
VEGFA-207ENST00000413642 GOLGA2P5Q9HBQ8 144 aa28.83■■■□□ 2.21
VEGFA-207ENST00000413642 RXFP1Q9HBX9 757 aa28.83■■■□□ 2.21
VEGFA-207ENST00000413642 CCDC39Q9UFE4 941 aa28.83■■■□□ 2.21
VEGFA-207ENST00000413642 FAM86C2PA6NEL3 165 aa28.82■■■□□ 2.2
VEGFA-207ENST00000413642 LOC730098B7Z3J9 87 aa28.82■■■□□ 2.2
VEGFA-207ENST00000413642 TOM1L1O75674 476 aa28.82■■■□□ 2.2
VEGFA-207ENST00000413642 BRD1O95696 1058 aa28.82■■■□□ 2.2
VEGFA-207ENST00000413642 SP100P23497 879 aaPredicted RBP28.82■■■□□ 2.2
VEGFA-207ENST00000413642 YARSP54577 528 aaKnown RBP28.82■■■□□ 2.2
VEGFA-207ENST00000413642 SOX4Q06945 474 aaPredicted RBP28.82■■■□□ 2.2
VEGFA-207ENST00000413642 FOXD4L6Q3SYB3 417 aaPredicted RBP28.82■■■□□ 2.2
VEGFA-207ENST00000413642 ALKAL1Q6UXT8 129 aa28.82■■■□□ 2.2
VEGFA-207ENST00000413642 FOXD4L3Q6VB84 417 aaPredicted RBP28.82■■■□□ 2.2
VEGFA-207ENST00000413642 PPFIBP1Q86W92 1011 aa28.82■■■□□ 2.2
VEGFA-207ENST00000413642 RNF135Q8IUD6 432 aa28.82■■■□□ 2.2
VEGFA-207ENST00000413642 KRI1Q8N9T8 703 aaKnown RBP28.82■■■□□ 2.2
VEGFA-207ENST00000413642 RIN2Q8WYP3 895 aaPredicted RBP28.82■■■□□ 2.2
VEGFA-207ENST00000413642 FBXL18Q96ME1 805 aa28.82■■■□□ 2.2
VEGFA-207ENST00000413642 ZMAT2Q96NC0 199 aaKnown RBP28.82■■■□□ 2.2
VEGFA-207ENST00000413642 PARVGQ9HBI0 331 aa28.82■■■□□ 2.2
VEGFA-207ENST00000413642 C11orf16Q9NQ32 467 aa28.82■■■□□ 2.2
VEGFA-207ENST00000413642 A0A087X0B3 334 aa28.81■■■□□ 2.2
VEGFA-207ENST00000413642 K7ENM7 598 aa28.81■■■□□ 2.2
VEGFA-207ENST00000413642 RPL17P18621 184 aaKnown RBP28.81■■■□□ 2.2
VEGFA-207ENST00000413642 NMT1P30419 496 aaKnown RBP28.81■■■□□ 2.2
VEGFA-207ENST00000413642 PKP1Q13835 747 aa28.81■■■□□ 2.2
VEGFA-207ENST00000413642 STK38Q15208 465 aa28.81■■■□□ 2.2
VEGFA-207ENST00000413642 USP41Q3LFD5 358 aa28.81■■■□□ 2.2
VEGFA-207ENST00000413642 XKR4Q5GH76 650 aa28.81■■■□□ 2.2
VEGFA-207ENST00000413642 RTP2Q5QGT7 225 aa28.81■■■□□ 2.2
VEGFA-207ENST00000413642 RRAGBQ5VZM2 374 aa28.81■■■□□ 2.2
VEGFA-207ENST00000413642 PRSS55Q6UWB4 352 aaPredicted RBP28.81■■■□□ 2.2
VEGFA-207ENST00000413642 ZPBP2Q6X784 338 aa28.81■■■□□ 2.2
VEGFA-207ENST00000413642 DYMQ7RTS9 669 aa28.81■■■□□ 2.2
VEGFA-207ENST00000413642 LINC00301Q8NCQ3 95 aa28.81■■■□□ 2.2
VEGFA-207ENST00000413642 SNX27Q96L92 541 aa28.81■■■□□ 2.2
VEGFA-207ENST00000413642 ACAP3Q96P50 834 aa28.81■■■□□ 2.2
VEGFA-207ENST00000413642 FIZ1Q96SL8 496 aa28.81■■■□□ 2.2
VEGFA-207ENST00000413642 DZANK1Q9NVP4 752 aa28.81■■■□□ 2.2
VEGFA-207ENST00000413642 SSX2IPQ9Y2D8 614 aa28.81■■■□□ 2.2
VEGFA-207ENST00000413642 TRAK2O60296 914 aa28.8■■■□□ 2.2
VEGFA-207ENST00000413642 TBCAO75347 108 aaKnown RBP28.8■■■□□ 2.2
VEGFA-207ENST00000413642 CLCNKBP51801 687 aa28.8■■■□□ 2.2
VEGFA-207ENST00000413642 CD300LGQ6UXG3 332 aa28.8■■■□□ 2.2
VEGFA-207ENST00000413642 TMC5Q6UXY8 1006 aa28.8■■■□□ 2.2
VEGFA-207ENST00000413642 GLYCTKQ8IVS8 523 aa28.8■■■□□ 2.2
VEGFA-207ENST00000413642 BICD1Q96G01 975 aa28.8■■■□□ 2.2
VEGFA-207ENST00000413642 C1QTNF1Q9BXJ1 281 aa28.8■■■□□ 2.2
VEGFA-207ENST00000413642 POMKQ9H5K3 350 aa28.8■■■□□ 2.2
VEGFA-207ENST00000413642 STK17AQ9UEE5 414 aa28.8■■■□□ 2.2
VEGFA-207ENST00000413642 MUTYHQ9UIF7 546 aa28.8■■■□□ 2.2
VEGFA-207ENST00000413642 TBX20Q9UMR3 447 aa28.8■■■□□ 2.2
VEGFA-207ENST00000413642 MORC2Q9Y6X9 1032 aaPredicted RBP28.8■■■□□ 2.2
VEGFA-207ENST00000413642 TDRD15B5MCY1 1934 aaKnown RBP28.8■■■□□ 2.2
VEGFA-207ENST00000413642 SF3B1O75533 1304 aaKnown RBP eCLIP28.79■■■□□ 2.26e-7■■■■■ 31.1
VEGFA-207ENST00000413642 SPATA31D3P0C874 917 aa28.79■■■□□ 2.2
VEGFA-207ENST00000413642 ITIH3Q06033 890 aa28.79■■■□□ 2.2
VEGFA-207ENST00000413642 NOLC1Q14978 699 aaKnown RBP eCLIP28.79■■■□□ 2.2
VEGFA-207ENST00000413642 FAM171A1Q5VUB5 890 aa28.79■■■□□ 2.2
VEGFA-207ENST00000413642 CES5AQ6NT32 575 aa28.79■■■□□ 2.2
VEGFA-207ENST00000413642 SPATA31D4Q6ZUB0 917 aa28.79■■■□□ 2.2
VEGFA-207ENST00000413642 PALB2Q86YC2 1186 aa28.79■■■□□ 2.2
VEGFA-207ENST00000413642 TOPORSQ9NS56 1045 aaPredicted RBP28.79■■■□□ 2.2
VEGFA-207ENST00000413642 MYMKA6NI61 221 aa28.78■■■□□ 2.2
VEGFA-207ENST00000413642 H0YCG3 227 aa28.78■■■□□ 2.2
VEGFA-207ENST00000413642 DCXO43602 365 aa28.78■■■□□ 2.2
VEGFA-207ENST00000413642 ADH1AP07327 375 aa28.78■■■□□ 2.2
VEGFA-207ENST00000413642 ZSCAN22P10073 491 aaPredicted RBP28.78■■■□□ 2.2
VEGFA-207ENST00000413642 TXLNAP40222 546 aa28.78■■■□□ 2.2
VEGFA-207ENST00000413642 MATR3P43243 847 aaKnown RBP eCLIP28.78■■■□□ 2.2
VEGFA-207ENST00000413642 MCL1Q07820 350 aa28.78■■■□□ 2.2
VEGFA-207ENST00000413642 ZC2HC1CQ53FD0 456 aaPredicted RBP28.78■■■□□ 2.2
VEGFA-207ENST00000413642 CEP57Q86XR8 500 aa28.78■■■□□ 2.2
VEGFA-207ENST00000413642 TMEM130Q8N3G9 435 aa28.78■■■□□ 2.2
VEGFA-207ENST00000413642 C3orf58Q8NDZ4 430 aa28.78■■■□□ 2.2
VEGFA-207ENST00000413642 ZNF396Q96N95 335 aaPredicted RBP28.78■■■□□ 2.2
VEGFA-207ENST00000413642 SPTLC2O15270 562 aa28.77■■■□□ 2.2
VEGFA-207ENST00000413642 CLDN3O15551 220 aa28.77■■■□□ 2.2
VEGFA-207ENST00000413642 SLC10A6Q3KNW5 377 aa28.77■■■□□ 2.2
VEGFA-207ENST00000413642 KCNN1Q92952 543 aa28.77■■■□□ 2.2
VEGFA-207ENST00000413642 C18orf25Q96B23 403 aaPredicted RBP28.77■■■□□ 2.2
VEGFA-207ENST00000413642 MAN1C1Q9NR34 630 aa28.77■■■□□ 2.2
VEGFA-207ENST00000413642 DAXXQ9UER7 740 aaPredicted RBP28.77■■■□□ 2.2
VEGFA-207ENST00000413642 SPDYE4A6NLX3 237 aa28.76■■■□□ 2.19
VEGFA-207ENST00000413642 I3L4J1 428 aa28.76■■■□□ 2.19
VEGFA-207ENST00000413642 B3GAT3O94766 335 aa28.76■■■□□ 2.19
VEGFA-207ENST00000413642 F13A1P00488 732 aa28.76■■■□□ 2.19
VEGFA-207ENST00000413642 ALADP13716 330 aa28.76■■■□□ 2.19
VEGFA-207ENST00000413642 KCNE1P15382 129 aa28.76■■■□□ 2.19
VEGFA-207ENST00000413642 LIG4P49917 911 aa28.76■■■□□ 2.19
VEGFA-207ENST00000413642 UPP1Q16831 310 aa28.76■■■□□ 2.19
VEGFA-207ENST00000413642 ZBTB41Q5SVQ8 909 aa28.76■■■□□ 2.19
VEGFA-207ENST00000413642 DCLRE1AQ6PJP8 1040 aa28.76■■■□□ 2.19
VEGFA-207ENST00000413642 SV2BQ7L1I2 683 aa28.76■■■□□ 2.19
VEGFA-207ENST00000413642 SFR1Q86XK3 245 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms