RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 FBXW11Q9UKB1 542 aa20.57■□□□□ 0.88
ITGA6-204ENST00000412899 USP20Q9Y2K6 914 aa20.57■□□□□ 0.88
ITGA6-204ENST00000412899 ACKR2O00590 384 aa20.56■□□□□ 0.88
ITGA6-204ENST00000412899 OR52Z1P0C646 297 aa20.56■□□□□ 0.88
ITGA6-204ENST00000412899 CYP11B2P19099 503 aa20.56■□□□□ 0.88
ITGA6-204ENST00000412899 RPA1P27694 616 aa20.56■□□□□ 0.88
ITGA6-204ENST00000412899 NAMPTP43490 491 aa20.56■□□□□ 0.88
ITGA6-204ENST00000412899 PPP2R5AQ15172 486 aa20.56■□□□□ 0.88
ITGA6-204ENST00000412899 ZNF174Q15697 407 aa20.56■□□□□ 0.88
ITGA6-204ENST00000412899 PPM1LQ5SGD2 360 aa20.56■□□□□ 0.88
ITGA6-204ENST00000412899 ST13P5Q8NFI4 369 aaPredicted RBP20.56■□□□□ 0.88
ITGA6-204ENST00000412899 LNX1Q8TBB1 728 aaPredicted RBP20.56■□□□□ 0.88
ITGA6-204ENST00000412899 CLSTN3Q9BQT9 956 aa20.56■□□□□ 0.88
ITGA6-204ENST00000412899 POLIQ9UNA4 740 aa20.56■□□□□ 0.88
ITGA6-204ENST00000412899 GDAQ9Y2T3 454 aa20.56■□□□□ 0.88
ITGA6-204ENST00000412899 ZFP37Q9Y6Q3 630 aaPredicted RBP20.56■□□□□ 0.88
ITGA6-204ENST00000412899 NUMBLQ9Y6R0 609 aa20.56■□□□□ 0.88
ITGA6-204ENST00000412899 ZFHX2Q9C0A1 2572 aaPredicted RBP20.55■□□□□ 0.88
ITGA6-204ENST00000412899 ANHXE9PGG2 379 aa20.55■□□□□ 0.88
ITGA6-204ENST00000412899 C8AP07357 584 aa20.55■□□□□ 0.88
ITGA6-204ENST00000412899 HNRNPA1P09651 372 aaKnown RBP eCLIP20.55■□□□□ 0.88
ITGA6-204ENST00000412899 HTR4Q13639 388 aa20.55■□□□□ 0.88
ITGA6-204ENST00000412899 PDXDC1Q6P996 788 aa20.55■□□□□ 0.88
ITGA6-204ENST00000412899 ADSSL1Q8N142 457 aa20.55■□□□□ 0.88
ITGA6-204ENST00000412899 CXCL16Q9H2A7 254 aa20.55■□□□□ 0.88
ITGA6-204ENST00000412899 ARHGEF3Q9NR81 526 aa20.55■□□□□ 0.88
ITGA6-204ENST00000412899 USP34Q70CQ2 3546 aa20.54■□□□□ 0.88
ITGA6-204ENST00000412899 GJB2P29033 226 aa20.54■□□□□ 0.88
ITGA6-204ENST00000412899 NAB2Q15742 525 aa20.54■□□□□ 0.88
ITGA6-204ENST00000412899 SPECC1Q5M775 1068 aa20.54■□□□□ 0.88
ITGA6-204ENST00000412899 EEF1DP3Q658K8 133 aa20.54■□□□□ 0.88
ITGA6-204ENST00000412899 PHLDB3Q6NSJ2 640 aa20.54■□□□□ 0.88
ITGA6-204ENST00000412899 IFT74Q96LB3 600 aa20.54■□□□□ 0.88
ITGA6-204ENST00000412899 CCDC113Q9H0I3 377 aa20.54■□□□□ 0.88
ITGA6-204ENST00000412899 CDH7Q9ULB5 785 aa20.54■□□□□ 0.88
ITGA6-204ENST00000412899 SMC3Q9UQE7 1217 aa20.54■□□□□ 0.88
ITGA6-204ENST00000412899 SIT1Q9Y3P8 196 aa20.54■□□□□ 0.88
ITGA6-204ENST00000412899 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.54■□□□□ 0.88
ITGA6-204ENST00000412899 CCL16O15467 120 aa20.53■□□□□ 0.88
ITGA6-204ENST00000412899 XYLBO75191 536 aa20.53■□□□□ 0.88
ITGA6-204ENST00000412899 NTHL1P78549 312 aa20.53■□□□□ 0.88
ITGA6-204ENST00000412899 ORC2Q13416 577 aaPredicted RBP20.53■□□□□ 0.88
ITGA6-204ENST00000412899 DCAF4L1Q3SXM0 396 aa20.53■□□□□ 0.88
ITGA6-204ENST00000412899 HAUS3Q68CZ6 603 aa20.53■□□□□ 0.88
ITGA6-204ENST00000412899 DCLRE1AQ6PJP8 1040 aa20.53■□□□□ 0.88
ITGA6-204ENST00000412899 KCNG4Q8TDN1 519 aa20.53■□□□□ 0.88
ITGA6-204ENST00000412899 POLD4Q9HCU8 107 aa20.53■□□□□ 0.88
ITGA6-204ENST00000412899 SLC2A4RGQ9NR83 387 aa20.53■□□□□ 0.88
ITGA6-204ENST00000412899 DOCK8Q8NF50 2099 aa20.52■□□□□ 0.88
ITGA6-204ENST00000412899 ADAM12O43184 909 aa20.52■□□□□ 0.88
ITGA6-204ENST00000412899 B3GAT3O94766 335 aa20.52■□□□□ 0.88
ITGA6-204ENST00000412899 EDN1P05305 212 aa20.52■□□□□ 0.88
ITGA6-204ENST00000412899 DCNP07585 359 aaKnown RBP20.52■□□□□ 0.88
ITGA6-204ENST00000412899 MUTP22033 750 aa20.52■□□□□ 0.88
ITGA6-204ENST00000412899 HOXA9P31269 272 aa20.52■□□□□ 0.88
ITGA6-204ENST00000412899 OR1D2P34982 312 aa20.52■□□□□ 0.88
ITGA6-204ENST00000412899 CCT6AP40227 531 aaKnown RBP20.52■□□□□ 0.88
ITGA6-204ENST00000412899 EFNA5P52803 228 aa20.52■□□□□ 0.88
ITGA6-204ENST00000412899 GLRA4Q5JXX5 417 aa20.52■□□□□ 0.88
ITGA6-204ENST00000412899 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.52■□□□□ 0.88
ITGA6-204ENST00000412899 SLC7A14Q8TBB6 771 aa20.52■□□□□ 0.88
ITGA6-204ENST00000412899 FGF14Q92915 247 aa20.52■□□□□ 0.88
ITGA6-204ENST00000412899 RPP25Q9BUL9 199 aaKnown RBP20.52■□□□□ 0.88
ITGA6-204ENST00000412899 KIFC3Q9BVG8 833 aa20.52■□□□□ 0.88
ITGA6-204ENST00000412899 GPC5P78333 572 aa20.51■□□□□ 0.87
ITGA6-204ENST00000412899 RAB33AQ14088 237 aa20.51■□□□□ 0.87
ITGA6-204ENST00000412899 TTC38Q5R3I4 469 aa20.51■□□□□ 0.87
ITGA6-204ENST00000412899 AXDND1Q5T1B0 1012 aaPredicted RBP20.51■□□□□ 0.87
ITGA6-204ENST00000412899 ATF7IP2Q5U623 682 aa20.51■□□□□ 0.87
ITGA6-204ENST00000412899 PARM1Q6UWI2 310 aa20.51■□□□□ 0.87
ITGA6-204ENST00000412899 APBB1IPQ7Z5R6 666 aaPredicted RBP20.51■□□□□ 0.87
ITGA6-204ENST00000412899 KIFAP3Q92845 792 aa20.51■□□□□ 0.87
ITGA6-204ENST00000412899 FGF13Q92913 245 aa20.51■□□□□ 0.87
ITGA6-204ENST00000412899 SHDQ96IW2 340 aa20.51■□□□□ 0.87
ITGA6-204ENST00000412899 BHMT2Q9H2M3 363 aa20.51■□□□□ 0.87
ITGA6-204ENST00000412899 DAXXQ9UER7 740 aaPredicted RBP20.51■□□□□ 0.87
ITGA6-204ENST00000412899 H3BQV1 296 aa20.5■□□□□ 0.87
ITGA6-204ENST00000412899 K7ERI5 159 aa20.5■□□□□ 0.87
ITGA6-204ENST00000412899 FGFR3P22607 806 aa20.5■□□□□ 0.87
ITGA6-204ENST00000412899 U2AF2P26368 475 aaKnown RBP eCLIP20.5■□□□□ 0.87
ITGA6-204ENST00000412899 CLCNKBP51801 687 aa20.5■□□□□ 0.87
ITGA6-204ENST00000412899 FOXK2Q01167 660 aa20.5■□□□□ 0.87
ITGA6-204ENST00000412899 UVSSAQ2YD98 709 aa20.5■□□□□ 0.87
ITGA6-204ENST00000412899 MCTP1Q6DN14 999 aa20.5■□□□□ 0.87
ITGA6-204ENST00000412899 MTSS1LQ765P7 747 aa20.5■□□□□ 0.87
ITGA6-204ENST00000412899 SEMA4AQ9H3S1 761 aa20.5■□□□□ 0.87
ITGA6-204ENST00000412899 LRWD1Q9UFC0 647 aa20.5■□□□□ 0.87
ITGA6-204ENST00000412899 NOL7Q9UMY1 257 aaKnown RBP20.5■□□□□ 0.87
ITGA6-204ENST00000412899 PTPRZ1P23471 2315 aaPredicted RBP20.49■□□□□ 0.87
ITGA6-204ENST00000412899 TMEM189-UBE2V1I3L0A0 370 aa20.49■□□□□ 0.87
ITGA6-204ENST00000412899 TRAPPC3O43617 180 aa20.49■□□□□ 0.87
ITGA6-204ENST00000412899 ECM1Q16610 540 aa20.49■□□□□ 0.87
ITGA6-204ENST00000412899 NT5DC1Q5TFE4 455 aa20.49■□□□□ 0.87
ITGA6-204ENST00000412899 ITFG1Q8TB96 612 aa20.49■□□□□ 0.87
ITGA6-204ENST00000412899 UROC1Q96N76 676 aa20.49■□□□□ 0.87
ITGA6-204ENST00000412899 PPP1R10Q96QC0 940 aaKnown RBP20.49■□□□□ 0.87
ITGA6-204ENST00000412899 FOXQ1Q9C009 403 aa20.49■□□□□ 0.87
ITGA6-204ENST00000412899 MTRRQ9UBK8 725 aa20.49■□□□□ 0.87
ITGA6-204ENST00000412899 KIAA1024Q9UPX6 916 aa20.49■□□□□ 0.87
ITGA6-204ENST00000412899 CDY1Q9Y6F8 540 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms