RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 SPP2Q13103 211 aa17.85■□□□□ 0.45
LIMS2-208ENST00000410011 PPP1R7Q15435 360 aa17.85■□□□□ 0.45
LIMS2-208ENST00000410011 SNCBQ16143 134 aa17.85■□□□□ 0.45
LIMS2-208ENST00000410011 SGO2Q562F6 1265 aa17.85■□□□□ 0.45
LIMS2-208ENST00000410011 RSBN1LQ6PCB5 846 aaPredicted RBP17.85■□□□□ 0.45
LIMS2-208ENST00000410011 GRK7Q8WTQ7 553 aa17.85■□□□□ 0.45
LIMS2-208ENST00000410011 ZKSCAN4Q969J2 545 aaPredicted RBP17.85■□□□□ 0.45
LIMS2-208ENST00000410011 TRIM11Q96F44 468 aa17.85■□□□□ 0.45
LIMS2-208ENST00000410011 GMLQ99445 158 aa17.85■□□□□ 0.45
LIMS2-208ENST00000410011 PRMT1Q99873 361 aaKnown RBP17.85■□□□□ 0.45
LIMS2-208ENST00000410011 CHORDC1Q9UHD1 332 aaPredicted RBP17.85■□□□□ 0.45
LIMS2-208ENST00000410011 PSME4Q14997 1843 aa17.85■□□□□ 0.45
LIMS2-208ENST00000410011 ASNSP08243 561 aa17.84■□□□□ 0.45
LIMS2-208ENST00000410011 UNGP13051 313 aaPredicted RBP17.84■□□□□ 0.45
LIMS2-208ENST00000410011 IVDP26440 423 aa17.84■□□□□ 0.45
LIMS2-208ENST00000410011 KCNJ1P48048 391 aa17.84■□□□□ 0.45
LIMS2-208ENST00000410011 PTK6Q13882 451 aa17.84■□□□□ 0.45
LIMS2-208ENST00000410011 WLSQ5T9L3 541 aa17.84■□□□□ 0.45
LIMS2-208ENST00000410011 FAM83AQ86UY5 434 aa17.84■□□□□ 0.45
LIMS2-208ENST00000410011 BTBD6Q96KE9 485 aa17.84■□□□□ 0.45
LIMS2-208ENST00000410011 CDC42EP4Q9H3Q1 356 aaKnown RBP17.84■□□□□ 0.45
LIMS2-208ENST00000410011 GEMIN8Q9NWZ8 242 aaKnown RBP17.84■□□□□ 0.45
LIMS2-208ENST00000410011 BCS1LQ9Y276 419 aa17.84■□□□□ 0.45
LIMS2-208ENST00000410011 PTPN22Q9Y2R2 807 aa17.84■□□□□ 0.45
LIMS2-208ENST00000410011 NFIBO00712 420 aa17.84■□□□□ 0.45
LIMS2-208ENST00000410011 KRT76Q01546 638 aa17.84■□□□□ 0.45
LIMS2-208ENST00000410011 DLGAP5Q15398 846 aa17.84■□□□□ 0.45
LIMS2-208ENST00000410011 RELL1Q8IUW5 271 aa17.84■□□□□ 0.45
LIMS2-208ENST00000410011 SYTL5Q8TDW5 730 aaPredicted RBP17.84■□□□□ 0.45
LIMS2-208ENST00000410011 DHX38Q92620 1227 aaKnown RBP17.84■□□□□ 0.45
LIMS2-208ENST00000410011 SNF8Q96H20 258 aa17.84■□□□□ 0.45
LIMS2-208ENST00000410011 ACP6Q9NPH0 428 aa17.84■□□□□ 0.45
LIMS2-208ENST00000410011 GOLGA8IPA6NC78 632 aa17.83■□□□□ 0.45
LIMS2-208ENST00000410011 GOLGA8JA6NMD2 632 aa17.83■□□□□ 0.45
LIMS2-208ENST00000410011 WDR64B1ANS9 1081 aa17.83■□□□□ 0.45
LIMS2-208ENST00000410011 CLDN3O15551 220 aa17.83■□□□□ 0.45
LIMS2-208ENST00000410011 NPTX2P47972 431 aa17.83■□□□□ 0.45
LIMS2-208ENST00000410011 PPARDQ03181 441 aa17.83■□□□□ 0.45
LIMS2-208ENST00000410011 KRT17Q04695 432 aa17.83■□□□□ 0.45
LIMS2-208ENST00000410011 PREPLQ4J6C6 727 aaPredicted RBP17.83■□□□□ 0.45
LIMS2-208ENST00000410011 UBAP2Q5T6F2 1119 aaKnown RBP17.83■□□□□ 0.45
LIMS2-208ENST00000410011 SNX3O60493 162 aa17.83■□□□□ 0.44
LIMS2-208ENST00000410011 TTC4O95801 387 aa17.83■□□□□ 0.44
LIMS2-208ENST00000410011 OAS1P00973 400 aaKnown RBP17.83■□□□□ 0.44
LIMS2-208ENST00000410011 MAPK4P31152 587 aa17.83■□□□□ 0.44
LIMS2-208ENST00000410011 RDXP35241 583 aaKnown RBP17.83■□□□□ 0.44
LIMS2-208ENST00000410011 CENPCQ03188 943 aa17.83■□□□□ 0.44
LIMS2-208ENST00000410011 CYP24A1Q07973 514 aa17.83■□□□□ 0.44
LIMS2-208ENST00000410011 DMP1Q13316 513 aaPredicted RBP17.83■□□□□ 0.44
LIMS2-208ENST00000410011 SV2AQ7L0J3 742 aa17.83■□□□□ 0.44
LIMS2-208ENST00000410011 TAS1R2Q8TE23 839 aa17.83■□□□□ 0.44
LIMS2-208ENST00000410011 LPAR1Q92633 364 aa17.83■□□□□ 0.44
LIMS2-208ENST00000410011 SENP7Q9BQF6 1050 aa17.83■□□□□ 0.44
LIMS2-208ENST00000410011 QTRT2Q9H974 415 aaKnown RBP17.83■□□□□ 0.44
LIMS2-208ENST00000410011 GPRC5CQ9NQ84 441 aa17.83■□□□□ 0.44
LIMS2-208ENST00000410011 HAUS2Q9NVX0 235 aa17.83■□□□□ 0.44
LIMS2-208ENST00000410011 PKD2L1Q9P0L9 805 aa17.83■□□□□ 0.44
LIMS2-208ENST00000410011 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.83■□□□□ 0.44
LIMS2-208ENST00000410011 CLRN2A0PK11 232 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 CFAP73A6NFT4 308 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 WDR46O15213 610 aaKnown RBP17.82■□□□□ 0.44
LIMS2-208ENST00000410011 GAS8O95995 478 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 GARTP22102 1010 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 SCP2P22307 547 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 ABCD1P33897 745 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 UGCGQ16739 394 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 FAM102BQ5T8I3 360 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 TRPM8Q7Z2W7 1104 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 CPNE8Q86YQ8 564 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 MCOLN2Q8IZK6 566 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 MTMR14Q8NCE2 650 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 ATL2Q8NHH9 583 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 CCDC127Q96BQ5 260 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 TRAIPQ9BWF2 469 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 PGAP2Q9UHJ9 254 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 SMIM23A6NLE4 172 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 SORBS3O60504 671 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 RTP1P59025 263 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 BPIFB4P59827 614 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 CLDN10P78369 228 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 ZYXQ15942 572 aaKnown RBP17.82■□□□□ 0.44
LIMS2-208ENST00000410011 XKR9Q5GH70 373 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 C15orf39Q6ZRI6 1047 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 BBOF1Q8ND07 529 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 ARHGEF2Q92974 986 aaKnown RBP17.82■□□□□ 0.44
LIMS2-208ENST00000410011 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.82■□□□□ 0.44
LIMS2-208ENST00000410011 ANAPC7Q9UJX3 599 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 NEU2Q9Y3R4 380 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 PCDHB2Q9Y5E7 798 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 RGPD3A6NKT7 1758 aaPredicted RBP17.82■□□□□ 0.44
LIMS2-208ENST00000410011 RGPD4Q7Z3J3 1758 aa17.82■□□□□ 0.44
LIMS2-208ENST00000410011 FAM170AA1A519 330 aa17.81■□□□□ 0.44
LIMS2-208ENST00000410011 VIMP08670 466 aaKnown RBP17.81■□□□□ 0.44
LIMS2-208ENST00000410011 SLCO1A2P46721 670 aa17.81■□□□□ 0.44
LIMS2-208ENST00000410011 RIPK1Q13546 671 aa17.81■□□□□ 0.44
LIMS2-208ENST00000410011 PGM5Q15124 567 aa17.81■□□□□ 0.44
LIMS2-208ENST00000410011 BRDTQ58F21 947 aaPredicted RBP17.81■□□□□ 0.44
LIMS2-208ENST00000410011 XRRA1Q6P2D8 792 aa17.81■□□□□ 0.44
LIMS2-208ENST00000410011 SAAL1Q96ER3 474 aa17.81■□□□□ 0.44
LIMS2-208ENST00000410011 ELAC2Q9BQ52 826 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms