RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 MTA3Q9BTC8 594 aa10.38□□□□□ -0.75
NUP43-204ENST00000403890 NIFKQ9BYG3 293 aaKnown RBP10.38□□□□□ -0.75
NUP43-204ENST00000403890 IL25Q9H293 177 aa10.38□□□□□ -0.75
NUP43-204ENST00000403890 OSBPL3Q9H4L5 887 aa10.38□□□□□ -0.75
NUP43-204ENST00000403890 BRD9Q9H8M2 597 aa10.38□□□□□ -0.75
NUP43-204ENST00000403890 IFT122Q9HBG6 1241 aa10.38□□□□□ -0.75
NUP43-204ENST00000403890 HCFC1R1Q9NWW0 138 aa10.38□□□□□ -0.75
NUP43-204ENST00000403890 MIOSQ9NXC5 875 aa10.38□□□□□ -0.75
NUP43-204ENST00000403890 DNMT3BQ9UBC3 853 aaKnown RBP10.38□□□□□ -0.75
NUP43-204ENST00000403890 K7ESF4 209 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 TAF4O00268 1085 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 TADA2AO75478 443 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 PAPSS2O95340 614 aaPredicted RBP10.37□□□□□ -0.75
NUP43-204ENST00000403890 CHRNB1P11230 501 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 SPINK2P20155 84 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 GGCXP38435 758 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 SCNN1GP51170 649 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 FOXC1Q12948 553 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 HDAC1Q13547 482 aaPredicted RBP10.37□□□□□ -0.75
NUP43-204ENST00000403890 GAS6Q14393 721 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 UVSSAQ2YD98 709 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 PRR16Q569H4 304 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 XKR3Q5GH77 459 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 JAKMIP3Q5VZ66 844 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 SMG8Q8ND04 991 aaKnown RBP10.37□□□□□ -0.75
NUP43-204ENST00000403890 ZCCHC14Q8WYQ9 949 aaKnown RBP10.37□□□□□ -0.75
NUP43-204ENST00000403890 IRF7Q92985 503 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 CEP89Q96ST8 783 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 CLSTN3Q9BQT9 956 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 TRMT61BQ9BVS5 477 aaKnown RBP10.37□□□□□ -0.75
NUP43-204ENST00000403890 TRPV5Q9NQA5 729 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 WDR70Q9NW82 654 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 ADAM28Q9UKQ2 775 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 WASF3Q9UPY6 502 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 SLC12A7Q9Y666 1083 aa10.37□□□□□ -0.75
NUP43-204ENST00000403890 PRC1O43663 620 aa10.36□□□□□ -0.75
NUP43-204ENST00000403890 HOXA6P31267 233 aa10.36□□□□□ -0.75
NUP43-204ENST00000403890 SFNP31947 248 aa10.36□□□□□ -0.75
NUP43-204ENST00000403890 MLH1P40692 756 aa10.36□□□□□ -0.75
NUP43-204ENST00000403890 LIFRP42702 1097 aa10.36□□□□□ -0.75
NUP43-204ENST00000403890 PTH1RQ03431 593 aa10.36□□□□□ -0.75
NUP43-204ENST00000403890 GRM2Q14416 872 aa10.36□□□□□ -0.75
NUP43-204ENST00000403890 RTP2Q5QGT7 225 aa10.36□□□□□ -0.75
NUP43-204ENST00000403890 AXDND1Q5T1B0 1012 aaPredicted RBP10.36□□□□□ -0.75
NUP43-204ENST00000403890 RNF43Q68DV7 783 aa10.36□□□□□ -0.75
NUP43-204ENST00000403890 SRGAP1Q7Z6B7 1085 aa10.36□□□□□ -0.75
NUP43-204ENST00000403890 RAB11FIP4Q86YS3 637 aa10.36□□□□□ -0.75
NUP43-204ENST00000403890 SLC7A14Q8TBB6 771 aa10.36□□□□□ -0.75
NUP43-204ENST00000403890 GATA6Q92908 595 aa10.36□□□□□ -0.75
NUP43-204ENST00000403890 TMEM87BQ96K49 555 aa10.36□□□□□ -0.75
NUP43-204ENST00000403890 ZFP42Q96MM3 310 aa10.36□□□□□ -0.75
NUP43-204ENST00000403890 JPH2Q9BR39 696 aaPredicted RBP10.36□□□□□ -0.75
NUP43-204ENST00000403890 TTPALQ9BTX7 342 aa10.36□□□□□ -0.75
NUP43-204ENST00000403890 ZFP14Q9HCL3 533 aa10.36□□□□□ -0.75
NUP43-204ENST00000403890 ZNF334Q9HCZ1 680 aaPredicted RBP10.36□□□□□ -0.75
NUP43-204ENST00000403890 IPPQ9Y573 584 aa10.36□□□□□ -0.75
NUP43-204ENST00000403890 PIAS3Q9Y6X2 628 aa10.36□□□□□ -0.75
NUP43-204ENST00000403890 HELZ2Q9BYK8 2649 aaKnown RBP10.36□□□□□ -0.75
NUP43-204ENST00000403890 SF3B1O75533 1304 aaKnown RBP eCLIP10.35□□□□□ -0.75
NUP43-204ENST00000403890 GREB1Q4ZG55 1949 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 DMXL2Q8TDJ6 3036 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 TMEM150BA6NC51 233 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 hCG_1984214I3L0E3 225 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 SMAPO00193 183 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 SH2B2O14492 632 aaPredicted RBP10.35□□□□□ -0.75
NUP43-204ENST00000403890 GIPC1O14908 333 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 MAFO75444 373 aaPredicted RBP10.35□□□□□ -0.75
NUP43-204ENST00000403890 EPN2O95208 641 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 STBD1O95210 358 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 RHOP08100 348 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 CCNE1P24864 410 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 MCM5P33992 734 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 RAP1GAPP47736 663 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 JAK3P52333 1124 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 ZNF252P-AS1Q0IIN9 211 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 PTGDRQ13258 359 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 SLC5A9Q2M3M2 681 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 PLA2G2CQ5R387 149 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 RTL10Q7L3V2 364 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 CACNA2D4Q7Z3S7 1137 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 WDR5BQ86VZ2 330 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 CEP57Q86XR8 500 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 MAP4K3Q8IVH8 894 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 ZNF713Q8N859 430 aaPredicted RBP10.35□□□□□ -0.75
NUP43-204ENST00000403890 SPRYD3Q8NCJ5 442 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 LNX1Q8TBB1 728 aaPredicted RBP10.35□□□□□ -0.75
NUP43-204ENST00000403890 PIK3R5Q8WYR1 880 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 RABGGTAQ92696 567 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 RIT2Q99578 217 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 SH2D3AQ9BRG2 576 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 MINDY3Q9H8M7 445 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 AVENQ9NQS1 362 aaPredicted RBP10.35□□□□□ -0.75
NUP43-204ENST00000403890 BARHL2Q9NY43 387 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 GIT1Q9Y2X7 761 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 HES2Q9Y543 173 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 PCDHGA5Q9Y5G8 931 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 COL4A3BPQ9Y5P4 624 aa10.35□□□□□ -0.75
NUP43-204ENST00000403890 ASH1LQ9NR48 2969 aaKnown RBP10.35□□□□□ -0.75
NUP43-204ENST00000403890 NOTCH4Q99466 2003 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 NBEAQ8NFP9 2946 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms