RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 NNMTP40261 264 aa9.38□□□□□ -0.91
PTPRM-202ENST00000400053 CUL3Q13618 768 aa9.38□□□□□ -0.91
PTPRM-202ENST00000400053 CAPRIN1Q14444 709 aaKnown RBP9.38□□□□□ -0.91
PTPRM-202ENST00000400053 KNOP1Q1ED39 458 aaKnown RBP9.38□□□□□ -0.91
PTPRM-202ENST00000400053 KLHL38Q2WGJ6 581 aa9.38□□□□□ -0.91
PTPRM-202ENST00000400053 MTERF2Q49AM1 385 aa9.38□□□□□ -0.91
PTPRM-202ENST00000400053 TTC39CQ8N584 583 aa9.38□□□□□ -0.91
PTPRM-202ENST00000400053 EFHBQ8N7U6 833 aa9.38□□□□□ -0.91
PTPRM-202ENST00000400053 ACAP3Q96P50 834 aa9.38□□□□□ -0.91
PTPRM-202ENST00000400053 DLGAP2Q9P1A6 1054 aa9.38□□□□□ -0.91
PTPRM-202ENST00000400053 SHPRHQ149N8 1683 aa9.38□□□□□ -0.91
PTPRM-202ENST00000400053 H3BQF6 201 aa9.38□□□□□ -0.91
PTPRM-202ENST00000400053 KCNQ2O43526 872 aa9.38□□□□□ -0.91
PTPRM-202ENST00000400053 KCNA3P22001 575 aa9.38□□□□□ -0.91
PTPRM-202ENST00000400053 CCNYL1Q8N7R7 359 aa9.38□□□□□ -0.91
PTPRM-202ENST00000400053 ARL8AQ96BM9 186 aa9.38□□□□□ -0.91
PTPRM-202ENST00000400053 TRABDQ9H4I3 376 aa9.38□□□□□ -0.91
PTPRM-202ENST00000400053 PCSK1NQ9UHG2 260 aa9.38□□□□□ -0.91
PTPRM-202ENST00000400053 L1RE1Q9UN81 338 aa9.38□□□□□ -0.91
PTPRM-202ENST00000400053 POTEFA5A3E0 1075 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 KRT87PA6NCN2 255 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 H0Y626 953 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 TRIM16O95361 564 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 POTEIP0CG38 1075 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 SERPINB4P48594 390 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 BLVRAP53004 296 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 KRT17Q04695 432 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 DHX34Q14147 1143 aaKnown RBP9.37□□□□□ -0.91
PTPRM-202ENST00000400053 PTPAQ15257 358 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 EAPPQ56P03 285 aaPredicted RBP9.37□□□□□ -0.91
PTPRM-202ENST00000400053 HABP4Q5JVS0 413 aaKnown RBP9.37□□□□□ -0.91
PTPRM-202ENST00000400053 POTEGQ6S5H5 508 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 POTEEQ6S8J3 1075 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 FBXL16Q8N461 479 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 CATSPER1Q8NEC5 780 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 RAPGEF5Q92565 580 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 CCDC90BQ9GZT6 254 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 GOLPH3Q9H4A6 298 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 NOD2Q9HC29 1040 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 PCDHGB4Q9UN71 923 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 PCDHA6Q9UN73 950 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 PCDHA8Q9Y5H6 950 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 IGF2BP3O00425 579 aaKnown RBP eCLIP9.37□□□□□ -0.91
PTPRM-202ENST00000400053 NTSR2O95665 410 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 SRGNP10124 158 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 ST3GAL1Q11201 340 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 MKRN3Q13064 507 aaKnown RBP9.37□□□□□ -0.91
PTPRM-202ENST00000400053 SLC18A3Q16572 532 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 IMPG1Q17R60 797 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 CYB5D1Q6P9G0 228 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 ADSSL1Q8N142 457 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 C4orf33Q8N1A6 199 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 XXYLT1Q8NBI6 393 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 AGR3Q8TD06 166 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 SNF8Q96H20 258 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 MRGBPQ9NV56 204 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 BCS1LQ9Y276 419 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 ITIH6Q6UXX5 1313 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 CLRN2A0PK11 232 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 LRRIQ3A6PVS8 624 aaPredicted RBP9.37□□□□□ -0.91
PTPRM-202ENST00000400053 PSMD14O00487 310 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 ENO1P06733 434 aaKnown RBP9.37□□□□□ -0.91
PTPRM-202ENST00000400053 CCND1P24385 295 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 SMARCA1P28370 1054 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 CASP7P55210 303 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 DNAJC9Q8WXX5 260 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 RMDN2Q96LZ7 410 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 FAM20AQ96MK3 541 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 TRIM9Q9C026 710 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 QTRT2Q9H974 415 aaKnown RBP9.37□□□□□ -0.91
PTPRM-202ENST00000400053 NPHS2Q9NP85 383 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 SUGT1Q9Y2Z0 365 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 FARP1Q9Y4F1 1045 aaPredicted RBP9.37□□□□□ -0.91
PTPRM-202ENST00000400053 F5H423 210 aaPredicted RBP9.37□□□□□ -0.91
PTPRM-202ENST00000400053 GSNP06396 782 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 CDH2P19022 906 aaPredicted RBP9.37□□□□□ -0.91
PTPRM-202ENST00000400053 TMEM270Q6UE05 265 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 FASTKD5Q7L8L6 764 aaKnown RBP9.37□□□□□ -0.91
PTPRM-202ENST00000400053 FAM160B2Q86V87 743 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 HEXIM2Q96MH2 286 aaKnown RBP9.37□□□□□ -0.91
PTPRM-202ENST00000400053 CELF4Q9BZC1 486 aaKnown RBP9.37□□□□□ -0.91
PTPRM-202ENST00000400053 GCOM2Q9BZD3 368 aaPredicted RBP9.37□□□□□ -0.91
PTPRM-202ENST00000400053 KDM4CQ9H3R0 1056 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 KIAA1586Q9HCI6 787 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 CYP26B1Q9NR63 512 aa9.37□□□□□ -0.91
PTPRM-202ENST00000400053 DEAF1O75398 565 aaPredicted RBP9.36□□□□□ -0.91
PTPRM-202ENST00000400053 TDP2O95551 362 aa9.36□□□□□ -0.91
PTPRM-202ENST00000400053 RAD51Q06609 339 aa9.36□□□□□ -0.91
PTPRM-202ENST00000400053 STK4Q13043 487 aa9.36□□□□□ -0.91
PTPRM-202ENST00000400053 ANKMY2Q8IV38 441 aa9.36□□□□□ -0.91
PTPRM-202ENST00000400053 TTC8Q8TAM2 541 aa9.36□□□□□ -0.91
PTPRM-202ENST00000400053 TRIM62Q9BVG3 475 aa9.36□□□□□ -0.91
PTPRM-202ENST00000400053 STMN3Q9NZ72 180 aa9.36□□□□□ -0.91
PTPRM-202ENST00000400053 PRDM4Q9UKN5 801 aa9.36□□□□□ -0.91
PTPRM-202ENST00000400053 PDIA5Q14554 519 aa9.36□□□□□ -0.91
PTPRM-202ENST00000400053 LRIG3Q6UXM1 1119 aa9.36□□□□□ -0.91
PTPRM-202ENST00000400053 RAB42Q8N4Z0 105 aa9.36□□□□□ -0.91
PTPRM-202ENST00000400053 TBC1D19Q8N5T2 526 aa9.36□□□□□ -0.91
PTPRM-202ENST00000400053 DAB1O75553 588 aa9.36□□□□□ -0.91
PTPRM-202ENST00000400053 DAB2P98082 770 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms