RNA–Protein interactions for RNA: ENST00000399621.5

CACNA1C-212, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-212ENST00000399621 ZC3H18Q86VM9 953 aaKnown RBP11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 PIGBQ92521 554 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 USP6NLQ92738 828 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 SPATA16Q9BXB7 569 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 FBXO10Q9UK96 956 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 KDM1AO60341 852 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 ZNF189O75820 626 aaPredicted RBP11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 ERVK-10P10266 1014 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 MAP3K10Q02779 954 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 KCNB1Q14721 858 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 PLCL1Q15111 1095 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 HEATR6Q6AI08 1181 aaKnown RBP11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 CATSPER3Q86XQ3 398 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 THOC1Q96FV9 657 aaKnown RBP11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 SENP2Q9HC62 589 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 GABBR1Q9UBS5 961 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 NLRP1Q9C000 1473 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 KRT87PA6NCN2 255 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 RASA4BC9J798 803 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 RASA4O43374 803 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 MYBL1P10243 752 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 DPEP1P16444 411 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 PSMC1P62191 440 aaKnown RBP11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 GPC5P78333 572 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 PKP1Q13835 747 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 UNC45BQ8IWX7 931 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 CCNYL1Q8N7R7 359 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 MCPH1Q8NEM0 835 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 SPACA7Q96KW9 195 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 TLR7Q9NYK1 1049 aaKnown RBP11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 EHD2Q9NZN4 543 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 CEP72Q9P209 647 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 NRBP1Q9UHY1 535 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 TCF3P15923 654 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 WEE1P30291 646 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 PRAMEP78395 509 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 NOL9Q5SY16 702 aaKnown RBP11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 PLEKHM3Q6ZWE6 761 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 CYFIP1Q7L576 1253 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 ELAC2Q9BQ52 826 aaKnown RBP11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 PCDHGB4Q9UN71 923 aa11.66□□□□□ -0.54
CACNA1C-212ENST00000399621 KLHL18O94889 574 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 MMEP08473 750 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 NEK2P51955 445 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 APPL2Q8NEU8 664 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 IL17REQ8NFR9 667 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 YY1AP1Q9H869 796 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 A0A087WUV0 522 aaPredicted RBP11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 PALMO75781 387 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 AP2B1P63010 937 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 PODNQ7Z5L7 613 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 ANKRD49Q8WVL7 239 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 FAM213AQ9BRX8 229 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 DYTNA2CJ06 578 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 SDC4P31431 198 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 MRPL28Q13084 256 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 VSTM4Q8IW00 320 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 PIGOQ8TEQ8 1089 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 HEMGNQ9BXL5 484 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 NFU1Q9UMS0 254 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 ATP7AQ04656 1500 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 CCDC188H7C350 402 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 VEGFAP15692 232 aaPredicted RBP11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 KCNA2P16389 499 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 SMAD1Q15797 465 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 KYAT1Q16773 422 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 TMEM270Q6UE05 265 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 RNF208Q9H0X6 261 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 UNC45AQ9H3U1 944 aa11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 DDX28Q9NUL7 540 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-212ENST00000399621 PJA2O43164 708 aa11.65□□□□□ -0.55
CACNA1C-212ENST00000399621 LRRC8EQ6NSJ5 796 aa11.65□□□□□ -0.55
CACNA1C-212ENST00000399621 TMC7Q7Z402 723 aa11.65□□□□□ -0.55
CACNA1C-212ENST00000399621 PHF21AQ96BD5 680 aa11.65□□□□□ -0.55
CACNA1C-212ENST00000399621 DYDC2Q96IM9 177 aa11.65□□□□□ -0.55
CACNA1C-212ENST00000399621 ZNF560Q96MR9 790 aa11.65□□□□□ -0.55
CACNA1C-212ENST00000399621 KIF2CQ99661 725 aa11.65□□□□□ -0.55
CACNA1C-212ENST00000399621 POLR3FQ9H1D9 316 aaPredicted RBP11.65□□□□□ -0.55
CACNA1C-212ENST00000399621 ARHGAP26Q9UNA1 814 aa11.65□□□□□ -0.55
CACNA1C-212ENST00000399621 PREX2Q70Z35 1606 aa11.65□□□□□ -0.55
CACNA1C-212ENST00000399621 URODP06132 367 aa11.64□□□□□ -0.55
CACNA1C-212ENST00000399621 KRT7P08729 469 aa11.64□□□□□ -0.55
CACNA1C-212ENST00000399621 DARSP14868 501 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-212ENST00000399621 NR5A1Q13285 461 aa11.64□□□□□ -0.55
CACNA1C-212ENST00000399621 MAPRE2Q15555 327 aa11.64□□□□□ -0.55
CACNA1C-212ENST00000399621 RNF135Q8IUD6 432 aa11.64□□□□□ -0.55
CACNA1C-212ENST00000399621 NUP85Q9BW27 656 aa11.64□□□□□ -0.55
CACNA1C-212ENST00000399621 BHMT2Q9H2M3 363 aa11.64□□□□□ -0.55
CACNA1C-212ENST00000399621 MIF4GDA9UHW6 222 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-212ENST00000399621 CAPN1P07384 714 aa11.64□□□□□ -0.55
CACNA1C-212ENST00000399621 ZFXP17010 805 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-212ENST00000399621 SLC9A1P19634 815 aa11.64□□□□□ -0.55
CACNA1C-212ENST00000399621 ARL6IP4Q66PJ3 421 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-212ENST00000399621 ALKBH5Q6P6C2 394 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-212ENST00000399621 GTF3C2Q8WUA4 911 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-212ENST00000399621 BTBD6Q96KE9 485 aa11.64□□□□□ -0.55
CACNA1C-212ENST00000399621 MRPL4Q9BYD3 311 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-212ENST00000399621 PCDHB6Q9Y5E3 794 aa11.64□□□□□ -0.55
CACNA1C-212ENST00000399621 PIK3R2O00459 728 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms