RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 NDUFB5O43674 189 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 DDNO94850 711 aaPredicted RBP9.87□□□□□ -0.83
ATL3-201ENST00000398868 WEE2P0C1S8 567 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 PRCPP42785 496 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 MAPK9P45984 424 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 MDM2Q00987 491 aaPredicted RBP9.87□□□□□ -0.83
ATL3-201ENST00000398868 COASYQ13057 564 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 SLC30A9Q6PML9 568 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 DCAF4Q8WV16 495 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 AKT1S1Q96B36 256 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 IQCDQ96DY2 449 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 SH3GL1Q99961 368 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 JPH1Q9HDC5 661 aaPredicted RBP9.87□□□□□ -0.83
ATL3-201ENST00000398868 KRT8P05787 483 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 VAMP7P51809 220 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 TBL3Q12788 808 aaKnown RBP9.87□□□□□ -0.83
ATL3-201ENST00000398868 TRIM42Q8IWZ5 723 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 ARL10Q8N8L6 244 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 FAM84BQ96KN1 310 aaPredicted RBP9.87□□□□□ -0.83
ATL3-201ENST00000398868 SH3GL2Q99962 352 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 TUBB6Q9BUF5 446 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 ITIH6Q6UXX5 1313 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 DNMT1P26358 1616 aaKnown RBP9.87□□□□□ -0.83
ATL3-201ENST00000398868 GOLGA8QA0A0J9YX86 632 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 GOLGA8OA6NCC3 632 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 GOLGA8NF8WBI6 632 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 NR3C1P04150 777 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 KCNA3P22001 575 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 GRK2P25098 689 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 STAT5BP51692 787 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 WDR72Q3MJ13 1102 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 RD3Q7Z3Z2 195 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 TMEM60Q9H2L4 133 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 TJAP1Q5JTD0 557 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 NFRKBQ6P4R8 1299 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 KLC3Q6P597 504 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 YME1L1Q96TA2 773 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 MRPL4Q9BYD3 311 aaKnown RBP9.87□□□□□ -0.83
ATL3-201ENST00000398868 NDST4Q9H3R1 872 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 EHD2Q9NZN4 543 aa9.87□□□□□ -0.83
ATL3-201ENST00000398868 APOBEC2Q9Y235 224 aaKnown RBP9.87□□□□□ -0.83
ATL3-201ENST00000398868 PRPF3O43395 683 aaKnown RBP9.86□□□□□ -0.83
ATL3-201ENST00000398868 CCHCR1Q8TD31 782 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 CYGBQ8WWM9 190 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 TRIM15Q9C019 465 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 FBXO28Q9NVF7 368 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 ZNRF3Q9ULT6 936 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 FAM205CA6NFA0 338 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 A8MX80 341 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 NPTXRO95502 500 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 ZNF286BP0CG31 522 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 SERPINB3P29508 390 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 QARSP47897 775 aaKnown RBP9.86□□□□□ -0.83
ATL3-201ENST00000398868 SESN2P58004 480 aaPredicted RBP9.86□□□□□ -0.83
ATL3-201ENST00000398868 CEP78Q5JTW2 689 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 NDUFAF2Q8N183 169 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 ARHGAP18Q8N392 663 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 SLC17A8Q8NDX2 589 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 NAF1Q96HR8 494 aaKnown RBP9.86□□□□□ -0.83
ATL3-201ENST00000398868 DEFB129Q9H1M3 183 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 CACNA2D2Q9NY47 1150 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 MAP3K20Q9NYL2 800 aaKnown RBP9.86□□□□□ -0.83
ATL3-201ENST00000398868 ZNF185O15231 689 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 FGFR4P22455 802 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 JAK3P52333 1124 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 ADCY2Q08462 1091 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 ZNF235Q14590 738 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 CNGA3Q16281 694 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 ZC2HC1CQ53FD0 456 aaPredicted RBP9.86□□□□□ -0.83
ATL3-201ENST00000398868 C2CD6Q53TS8 623 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 EFCAB12Q6NXP0 572 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 SH3BP1Q9Y3L3 701 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 FAM135BQ49AJ0 1406 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 TCP11X1B4DZS4 312 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 CYP26A1O43174 497 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 TCN1P20061 433 aaPredicted RBP9.86□□□□□ -0.83
ATL3-201ENST00000398868 MAP4P27816 1152 aaKnown RBP9.86□□□□□ -0.83
ATL3-201ENST00000398868 DDX42Q86XP3 938 aaKnown RBP eCLIP9.86□□□□□ -0.83
ATL3-201ENST00000398868 PPM1NQ8N819 430 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 COQ7Q99807 217 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 AIPL1Q9NZN9 384 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 STOML1Q9UBI4 398 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 AGO2Q9UKV8 859 aaKnown RBP9.86□□□□□ -0.83
ATL3-201ENST00000398868 COPEO14579 308 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 ATMINO43313 823 aaPredicted RBP9.86□□□□□ -0.83
ATL3-201ENST00000398868 DDX5P17844 614 aaKnown RBP9.86□□□□□ -0.83
ATL3-201ENST00000398868 CUL3Q13618 768 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 ARMCX6Q7L4S7 300 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 EMSYQ7Z589 1322 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 ABHD8Q96I13 439 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 V9GYQ6 96 aa9.86□□□□□ -0.83
ATL3-201ENST00000398868 PLXNC1O60486 1568 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 WDR47O94967 919 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 PRKCBP05771 671 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 ATP6V1B1P15313 513 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 SERPINB4P48594 390 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 CYP4A22Q5TCH4 519 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 LVRNQ6Q4G3 990 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 PGBD4Q96DM1 585 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 CNBD2Q96M20 576 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms