RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 SYCE2Q6PIF2 218 aa25.35■■□□□ 1.65
HMGA2-202ENST00000393577 ADHFE1Q8IWW8 467 aa25.35■■□□□ 1.65
HMGA2-202ENST00000393577 HASPINQ8TF76 798 aa25.35■■□□□ 1.65
HMGA2-202ENST00000393577 KCNN1Q92952 543 aa25.35■■□□□ 1.65
HMGA2-202ENST00000393577 KLHL5Q96PQ7 755 aa25.35■■□□□ 1.65
HMGA2-202ENST00000393577 GPR62Q9BZJ7 368 aa25.35■■□□□ 1.65
HMGA2-202ENST00000393577 TOPORSQ9NS56 1045 aaPredicted RBP25.35■■□□□ 1.65
HMGA2-202ENST00000393577 LILRB3O75022 631 aa25.34■■□□□ 1.65
HMGA2-202ENST00000393577 TADA2AO75478 443 aa25.34■■□□□ 1.65
HMGA2-202ENST00000393577 KIF4AO95239 1232 aa25.34■■□□□ 1.65
HMGA2-202ENST00000393577 CNPP09543 421 aaKnown RBP25.34■■□□□ 1.65
HMGA2-202ENST00000393577 EPCAMP16422 314 aa25.34■■□□□ 1.65
HMGA2-202ENST00000393577 MATR3P43243 847 aaKnown RBP eCLIP25.34■■□□□ 1.651e-6■■■□□ 16.6
HMGA2-202ENST00000393577 SV2BQ7L1I2 683 aa25.34■■□□□ 1.65
HMGA2-202ENST00000393577 DDX12PQ92771 950 aa25.34■■□□□ 1.65
HMGA2-202ENST00000393577 B3GALT6Q96L58 329 aa25.34■■□□□ 1.65
HMGA2-202ENST00000393577 ACAP3Q96P50 834 aa25.34■■□□□ 1.65
HMGA2-202ENST00000393577 PPP1R10Q96QC0 940 aaKnown RBP25.34■■□□□ 1.65
HMGA2-202ENST00000393577 FIZ1Q96SL8 496 aa25.34■■□□□ 1.65
HMGA2-202ENST00000393577 TBX20Q9UMR3 447 aa25.34■■□□□ 1.65
HMGA2-202ENST00000393577 MYMKA6NI61 221 aa25.33■■□□□ 1.65
HMGA2-202ENST00000393577 HOXB8P17481 243 aaPredicted RBP25.33■■□□□ 1.65
HMGA2-202ENST00000393577 KLRC2P26717 231 aa25.33■■□□□ 1.65
HMGA2-202ENST00000393577 NMT1P30419 496 aaKnown RBP25.33■■□□□ 1.65
HMGA2-202ENST00000393577 LIG4P49917 911 aa25.33■■□□□ 1.65
HMGA2-202ENST00000393577 SEZ6Q53EL9 994 aa25.33■■□□□ 1.65
HMGA2-202ENST00000393577 KIAA1841Q6NSI8 718 aa25.33■■□□□ 1.65
HMGA2-202ENST00000393577 PPFIBP1Q86W92 1011 aa25.33■■□□□ 1.65
HMGA2-202ENST00000393577 PDILTQ8N807 584 aa25.33■■□□□ 1.65
HMGA2-202ENST00000393577 SLC22A17Q8WUG5 538 aa25.33■■□□□ 1.65
HMGA2-202ENST00000393577 SNX27Q96L92 541 aa25.33■■□□□ 1.65
HMGA2-202ENST00000393577 S1PR5Q9H228 398 aa25.33■■□□□ 1.65
HMGA2-202ENST00000393577 SSX2IPQ9Y2D8 614 aa25.33■■□□□ 1.65
HMGA2-202ENST00000393577 SMIM28A0A1B0GU29 152 aa25.32■■□□□ 1.64
HMGA2-202ENST00000393577 CLDN3O15551 220 aa25.32■■□□□ 1.64
HMGA2-202ENST00000393577 SCP2P22307 547 aa25.32■■□□□ 1.64
HMGA2-202ENST00000393577 DSG1Q02413 1049 aa25.32■■□□□ 1.64
HMGA2-202ENST00000393577 MCL1Q07820 350 aa25.32■■□□□ 1.64
HMGA2-202ENST00000393577 TPRNQ4KMQ1 711 aa25.32■■□□□ 1.64
HMGA2-202ENST00000393577 XKR4Q5GH76 650 aa25.32■■□□□ 1.64
HMGA2-202ENST00000393577 KIAA0319Q5VV43 1072 aa25.32■■□□□ 1.64
HMGA2-202ENST00000393577 ALKAL1Q6UXT8 129 aa25.32■■□□□ 1.64
HMGA2-202ENST00000393577 SFR1Q86XK3 245 aa25.32■■□□□ 1.64
HMGA2-202ENST00000393577 HAPLN2Q9GZV7 340 aa25.32■■□□□ 1.64
HMGA2-202ENST00000393577 CHST7Q9NS84 486 aa25.32■■□□□ 1.64
HMGA2-202ENST00000393577 SF3B1O75533 1304 aaKnown RBP eCLIP25.32■■□□□ 1.64
HMGA2-202ENST00000393577 HNRNPDLO14979 420 aaKnown RBP25.31■■□□□ 1.64
HMGA2-202ENST00000393577 CUTAO60888 179 aa25.31■■□□□ 1.64
HMGA2-202ENST00000393577 USP41Q3LFD5 358 aa25.31■■□□□ 1.64
HMGA2-202ENST00000393577 SUSD6Q92537 303 aa25.31■■□□□ 1.64
HMGA2-202ENST00000393577 KHSRPQ92945 711 aaKnown RBP eCLIP25.31■■□□□ 1.642e-7■■■□□ 15.7
HMGA2-202ENST00000393577 POP1Q99575 1024 aaKnown RBP25.31■■□□□ 1.64
HMGA2-202ENST00000393577 GOLGA2P5Q9HBQ8 144 aa25.31■■□□□ 1.64
HMGA2-202ENST00000393577 PLXNA3P51805 1871 aa25.31■■□□□ 1.64
HMGA2-202ENST00000393577 PDCD11Q14690 1871 aaKnown RBP25.31■■□□□ 1.64
HMGA2-202ENST00000393577 C19orf67A6NJJ6 358 aa25.3■■□□□ 1.64
HMGA2-202ENST00000393577 MEFVO15553 781 aaPredicted RBP25.3■■□□□ 1.64
HMGA2-202ENST00000393577 PIGRP01833 764 aa25.3■■□□□ 1.64
HMGA2-202ENST00000393577 CLCN4P51793 760 aa25.3■■□□□ 1.64
HMGA2-202ENST00000393577 GTF2BQ00403 316 aa25.3■■□□□ 1.64
HMGA2-202ENST00000393577 KCNG4Q8TDN1 519 aa25.3■■□□□ 1.64
HMGA2-202ENST00000393577 RIN2Q8WYP3 895 aaPredicted RBP25.3■■□□□ 1.64
HMGA2-202ENST00000393577 DNAJC19Q96DA6 116 aa25.3■■□□□ 1.64
HMGA2-202ENST00000393577 ZMAT2Q96NC0 199 aaKnown RBP25.3■■□□□ 1.64
HMGA2-202ENST00000393577 DZANK1Q9NVP4 752 aa25.3■■□□□ 1.64
HMGA2-202ENST00000393577 CNTN3Q9P232 1028 aa25.3■■□□□ 1.64
HMGA2-202ENST00000393577 TEX28O15482 410 aa25.29■■□□□ 1.64
HMGA2-202ENST00000393577 ADH1AP07327 375 aa25.29■■□□□ 1.64
HMGA2-202ENST00000393577 ABCD1P33897 745 aa25.29■■□□□ 1.64
HMGA2-202ENST00000393577 CLCNKBP51801 687 aa25.29■■□□□ 1.64
HMGA2-202ENST00000393577 DNM1Q05193 864 aaKnown RBP25.29■■□□□ 1.64
HMGA2-202ENST00000393577 SOX4Q06945 474 aaPredicted RBP25.29■■□□□ 1.64
HMGA2-202ENST00000393577 ZC2HC1CQ53FD0 456 aaPredicted RBP25.29■■□□□ 1.64
HMGA2-202ENST00000393577 RARS2Q5T160 578 aaKnown RBP25.29■■□□□ 1.64
HMGA2-202ENST00000393577 SHC4Q6S5L8 630 aa25.29■■□□□ 1.64
HMGA2-202ENST00000393577 MAP4K3Q8IVH8 894 aa25.29■■□□□ 1.64
HMGA2-202ENST00000393577 C12orf76Q8N812 135 aaPredicted RBP25.29■■□□□ 1.64
HMGA2-202ENST00000393577 UROC1Q96N76 676 aa25.29■■□□□ 1.64
HMGA2-202ENST00000393577 RXFP1Q9HBX9 757 aa25.29■■□□□ 1.64
HMGA2-202ENST00000393577 CDH22Q9UJ99 828 aa25.29■■□□□ 1.64
HMGA2-202ENST00000393577 VWA8A3KMH1 1905 aa25.28■■□□□ 1.64
HMGA2-202ENST00000393577 CXCL8P10145 99 aa25.28■■□□□ 1.64
HMGA2-202ENST00000393577 KCNE1P15382 129 aa25.28■■□□□ 1.64
HMGA2-202ENST00000393577 CBX2Q14781 532 aaPredicted RBP25.28■■□□□ 1.64
HMGA2-202ENST00000393577 SLC10A6Q3KNW5 377 aa25.28■■□□□ 1.64
HMGA2-202ENST00000393577 RTP2Q5QGT7 225 aa25.28■■□□□ 1.64
HMGA2-202ENST00000393577 FAM171A1Q5VUB5 890 aa25.28■■□□□ 1.64
HMGA2-202ENST00000393577 ATL3Q6DD88 541 aa25.28■■□□□ 1.64
HMGA2-202ENST00000393577 FBXL18Q96ME1 805 aa25.28■■□□□ 1.64
HMGA2-202ENST00000393577 PHF7Q9BWX1 381 aaPredicted RBP25.28■■□□□ 1.64
HMGA2-202ENST00000393577 ST6GALNAC4Q9H4F1 302 aa25.28■■□□□ 1.64
HMGA2-202ENST00000393577 SLC38A7Q9NVC3 462 aa25.28■■□□□ 1.64
HMGA2-202ENST00000393577 SPDYE4A6NLX3 237 aa25.27■■□□□ 1.64
HMGA2-202ENST00000393577 TMEM189-UBE2V1I3L0A0 370 aa25.27■■□□□ 1.64
HMGA2-202ENST00000393577 B3GAT3O94766 335 aa25.27■■□□□ 1.64
HMGA2-202ENST00000393577 IDEP14735 1019 aa25.27■■□□□ 1.64
HMGA2-202ENST00000393577 GAP43P17677 238 aa25.27■■□□□ 1.64
HMGA2-202ENST00000393577 IGFBP6P24592 240 aaPredicted RBP25.27■■□□□ 1.64
HMGA2-202ENST00000393577 ITIH3Q06033 890 aa25.27■■□□□ 1.64
HMGA2-202ENST00000393577 UPP1Q16831 310 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms