RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 CACNA1FO60840 1977 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 A8MU76 341 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 SUN1O94901 812 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 EPHB2P29323 1055 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 HSD17B3P37058 310 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 ACAP1Q15027 740 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 NECTIN1Q15223 517 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 EFHD2Q96C19 240 aaPredicted RBP12.08□□□□□ -0.48
LAMB1-203ENST00000393560 PRMT1Q99873 361 aaKnown RBP12.08□□□□□ -0.48
LAMB1-203ENST00000393560 CNOT10Q9H9A5 744 aaKnown RBP12.08□□□□□ -0.48
LAMB1-203ENST00000393560 RXFP1Q9HBX9 757 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 ZNF277Q9NRM2 450 aaPredicted RBP12.08□□□□□ -0.48
LAMB1-203ENST00000393560 NFE2L3Q9Y4A8 694 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 SLC4A4Q9Y6R1 1079 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 KRT36O76013 467 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 HEXIM1O94992 359 aaKnown RBP12.08□□□□□ -0.48
LAMB1-203ENST00000393560 STT3AP46977 705 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 FXR1P51114 621 aaKnown RBP eCLIP12.08□□□□□ -0.48
LAMB1-203ENST00000393560 STK4Q13043 487 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 NR1I3Q14994 352 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 TRADDQ15628 312 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 GRIK5Q16478 980 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 LRIG3Q6UXM1 1119 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 GATAD2AQ86YP4 633 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 DEPDC4Q8N2C3 294 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 ACTRT2Q8TDY3 377 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 KAZALD1Q96I82 304 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 FAR2Q96K12 515 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 PLGRKTQ9HBL7 147 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 ZSWIM6Q9HCJ5 1215 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 POU2F3Q9UKI9 436 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 HYOU1Q9Y4L1 999 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 MAD1L1Q9Y6D9 718 aa12.08□□□□□ -0.48
LAMB1-203ENST00000393560 COL5A2P05997 1499 aaPredicted RBP12.07□□□□□ -0.48
LAMB1-203ENST00000393560 POLR3DP05423 398 aaPredicted RBP12.07□□□□□ -0.48
LAMB1-203ENST00000393560 SNRPA1P09661 255 aaKnown RBP12.07□□□□□ -0.48
LAMB1-203ENST00000393560 RXRBP28702 533 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 ENTPD1P49961 510 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 AP1B1Q10567 949 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 KRT71Q3SY84 523 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 DCAF6Q58WW2 860 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 MAP3K21Q5TCX8 1036 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 AGBL2Q5U5Z8 902 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 TPTE2Q6XPS3 522 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 KIF6Q6ZMV9 814 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 SFR1Q86XK3 245 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 DDX42Q86XP3 938 aaKnown RBP eCLIP12.07□□□□□ -0.48
LAMB1-203ENST00000393560 SLC22A8Q8TCC7 542 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 ATL1Q8WXF7 558 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 EME1Q96AY2 570 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 FANCFQ9NPI8 374 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 REXO2Q9Y3B8 237 aaKnown RBP12.07□□□□□ -0.48
LAMB1-203ENST00000393560 PCDHGB3Q9Y5G1 929 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 GOLGB1Q14789 3259 aaKnown RBP12.07□□□□□ -0.48
LAMB1-203ENST00000393560 ZMYM6O95789 1325 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 hCG_1642624A0A1W2PR95 340 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 K7EPI3 171 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 MCF2LO15068 1137 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 ZNF862O60290 1169 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 RNGTTO60942 597 aaKnown RBP12.07□□□□□ -0.48
LAMB1-203ENST00000393560 SLC1A1P43005 524 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 PTPN5P54829 565 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 UBXN2AP68543 259 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 KRT76Q01546 638 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 SLC34A1Q06495 639 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 GIT2Q14161 759 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 KCTD2Q14681 263 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 KLHL38Q2WGJ6 581 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 PPP4R4Q6NUP7 873 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 TRMT44Q8IYL2 757 aaKnown RBP12.07□□□□□ -0.48
LAMB1-203ENST00000393560 AGGF1Q8N302 714 aaeCLIP12.07□□□□□ -0.48
LAMB1-203ENST00000393560 DDX43Q9NXZ2 648 aaKnown RBP12.07□□□□□ -0.48
LAMB1-203ENST00000393560 ERVK-11Q9UQG0 969 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 OVOS2A0A0G2JMS6 1433 aa12.07□□□□□ -0.48
LAMB1-203ENST00000393560 TRIM64A6NGJ6 449 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 TRIM64BA6NI03 449 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.06□□□□□ -0.48
LAMB1-203ENST00000393560 H0YGN5 161 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 M0QX08 132 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 GNPATO15228 680 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 CXCR5P32302 372 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 ARL1P40616 181 aaPredicted RBP12.06□□□□□ -0.48
LAMB1-203ENST00000393560 CBX5P45973 191 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 NR2C2P49116 596 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 HAND2P61296 217 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 EPHA7Q15375 998 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 TMEM63BQ5T3F8 832 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 BTBD8Q5XKL5 378 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 RNF19BQ6ZMZ0 732 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 DCDC5Q6ZRR9 648 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 MMAAQ8IVH4 418 aaKnown RBP12.06□□□□□ -0.48
LAMB1-203ENST00000393560 MYD88Q99836 296 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 HAUS4Q9H6D7 363 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 WASH6PQ9NQA3 447 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 HPS4Q9NQG7 708 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 SACM1LQ9NTJ5 587 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 PRKAG3Q9UGI9 489 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 NFS1Q9Y697 457 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 CAPN6Q9Y6Q1 641 aa12.06□□□□□ -0.48
LAMB1-203ENST00000393560 CRYBG1Q9Y4K1 1723 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms