RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 ESYT3A0FGR9 886 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 HSF2BPO75031 334 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 ITGA4P13612 1032 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 TNNI1P19237 187 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 PEX5P50542 639 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 MOGSQ13724 837 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 CAPSQ13938 189 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 CLEC16AQ2KHT3 1053 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 TDRD10Q5VZ19 366 aaKnown RBP15.35■□□□□ 0.05
MKS1-203ENST00000393120 USP50Q70EL3 339 aaPredicted RBP15.35■□□□□ 0.05
MKS1-203ENST00000393120 FASTKD5Q7L8L6 764 aaKnown RBP15.35■□□□□ 0.05
MKS1-203ENST00000393120 CD101Q93033 1021 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 CDCA5Q96FF9 252 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 CLMNQ96JQ2 1002 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 FGD4Q96M96 766 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 ZSWIM1Q9BR11 485 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 PAGR1Q9BTK6 254 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 TARS2Q9BW92 718 aaKnown RBP15.35■□□□□ 0.05
MKS1-203ENST00000393120 DDX47Q9H0S4 455 aaKnown RBP15.35■□□□□ 0.05
MKS1-203ENST00000393120 AZI2Q9H6S1 392 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 ACP6Q9NPH0 428 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 OTOFQ9HC10 1997 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 GOLGA8KD6RF30 607 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 PHACTR2O75167 634 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 HLA-DRAP01903 254 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 FAM153BP0C7A2 387 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 HSPA9P38646 679 aaKnown RBP15.35■□□□□ 0.05
MKS1-203ENST00000393120 ACOT2P49753 483 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 PTENP60484 403 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 GRM1Q13255 1194 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 FAM153CQ494X1 144 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 CELF3Q5SZQ8 465 aaKnown RBP15.35■□□□□ 0.05
MKS1-203ENST00000393120 GOLGA6L1Q8N7Z2 621 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 TCP11Q8WWU5 503 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 CGRRF1Q99675 332 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 GPR20Q99678 358 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 PI4K2AQ9BTU6 479 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 MSTO1Q9BUK6 570 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 FAM204AQ9H8W3 233 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.35■□□□□ 0.05
MKS1-203ENST00000393120 RBAKQ9NYW8 714 aaPredicted RBP15.35■□□□□ 0.05
MKS1-203ENST00000393120 FAM153AQ9UHL3 310 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 TRPC6Q9Y210 931 aa15.35■□□□□ 0.05
MKS1-203ENST00000393120 CNTNAP2Q9UHC6 1331 aa15.34■□□□□ 0.05
MKS1-203ENST00000393120 IGKV6-21A0A0C4DH24 114 aa15.34■□□□□ 0.05
MKS1-203ENST00000393120 GOLGA6L10A0A0M3HER8 536 aa15.34■□□□□ 0.05
MKS1-203ENST00000393120 VNN1O95497 513 aa15.34■□□□□ 0.05
MKS1-203ENST00000393120 UNGP13051 313 aaPredicted RBP15.34■□□□□ 0.05
MKS1-203ENST00000393120 COMTP21964 271 aa15.34■□□□□ 0.05
MKS1-203ENST00000393120 OSBPP22059 807 aa15.34■□□□□ 0.05
MKS1-203ENST00000393120 CTNNA2P26232 953 aa15.34■□□□□ 0.05
MKS1-203ENST00000393120 ECHS1P30084 290 aa15.34■□□□□ 0.05
MKS1-203ENST00000393120 AP3M2P53677 418 aa15.34■□□□□ 0.05
MKS1-203ENST00000393120 PPFIA1Q13136 1202 aa15.34■□□□□ 0.05
MKS1-203ENST00000393120 MXD4Q14582 209 aaPredicted RBP15.34■□□□□ 0.05
MKS1-203ENST00000393120 LY6KQ17RY6 165 aa15.34■□□□□ 0.05
MKS1-203ENST00000393120 CDCA2Q69YH5 1023 aaPredicted RBP15.34■□□□□ 0.05
MKS1-203ENST00000393120 CD302Q8IX05 232 aa15.34■□□□□ 0.05
MKS1-203ENST00000393120 PRPF31Q8WWY3 499 aaKnown RBP15.34■□□□□ 0.05
MKS1-203ENST00000393120 L3MBTL3Q96JM7 780 aaPredicted RBP15.34■□□□□ 0.05
MKS1-203ENST00000393120 ZBTB45Q96K62 511 aaPredicted RBP15.34■□□□□ 0.05
MKS1-203ENST00000393120 NUP85Q9BW27 656 aa15.34■□□□□ 0.05
MKS1-203ENST00000393120 CCDC113Q9H0I3 377 aa15.34■□□□□ 0.05
MKS1-203ENST00000393120 MROH8Q9H579 483 aa15.34■□□□□ 0.05
MKS1-203ENST00000393120 TXNRD2Q9NNW7 524 aa15.34■□□□□ 0.05
MKS1-203ENST00000393120 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.34■□□□□ 0.05
MKS1-203ENST00000393120 CNTN6Q9UQ52 1028 aa15.34■□□□□ 0.05
MKS1-203ENST00000393120 SIP14410 1827 aa15.34■□□□□ 0.05
MKS1-203ENST00000393120 CCDC66A2RUB6 948 aa15.33■□□□□ 0.05
MKS1-203ENST00000393120 MYBL1P10243 752 aa15.33■□□□□ 0.05
MKS1-203ENST00000393120 KRT5P13647 590 aa15.33■□□□□ 0.05
MKS1-203ENST00000393120 ACO1P21399 889 aaKnown RBP15.33■□□□□ 0.05
MKS1-203ENST00000393120 SLC26A2P50443 739 aa15.33■□□□□ 0.05
MKS1-203ENST00000393120 WNT7BP56706 349 aa15.33■□□□□ 0.05
MKS1-203ENST00000393120 KCTD2Q14681 263 aa15.33■□□□□ 0.05
MKS1-203ENST00000393120 TRADDQ15628 312 aa15.33■□□□□ 0.05
MKS1-203ENST00000393120 C1orf131Q8NDD1 294 aaKnown RBP15.33■□□□□ 0.05
MKS1-203ENST00000393120 ZNF564Q8TBZ8 553 aaPredicted RBP15.33■□□□□ 0.05
MKS1-203ENST00000393120 ATP8B4Q8TF62 1192 aa15.33■□□□□ 0.05
MKS1-203ENST00000393120 RIN2Q8WYP3 895 aaPredicted RBP15.33■□□□□ 0.05
MKS1-203ENST00000393120 ZNF653Q96CK0 615 aa15.33■□□□□ 0.05
MKS1-203ENST00000393120 TRIM11Q96F44 468 aa15.33■□□□□ 0.05
MKS1-203ENST00000393120 FHDC1Q9C0D6 1143 aaPredicted RBP15.33■□□□□ 0.05
MKS1-203ENST00000393120 AVENQ9NQS1 362 aaPredicted RBP15.33■□□□□ 0.05
MKS1-203ENST00000393120 AMACRQ9UHK6 382 aa15.33■□□□□ 0.05
MKS1-203ENST00000393120 MSCO60682 206 aa15.33■□□□□ 0.04
MKS1-203ENST00000393120 TOM1L1O75674 476 aa15.33■□□□□ 0.04
MKS1-203ENST00000393120 ARIH2O95376 493 aa15.33■□□□□ 0.04
MKS1-203ENST00000393120 CTNNA1P35221 906 aaKnown RBP15.33■□□□□ 0.04
MKS1-203ENST00000393120 PIK3CAP42336 1068 aa15.33■□□□□ 0.04
MKS1-203ENST00000393120 MESDQ14696 234 aa15.33■□□□□ 0.04
MKS1-203ENST00000393120 Q3C1V9 767 aa15.33■□□□□ 0.04
MKS1-203ENST00000393120 CFAP58Q5T655 872 aa15.33■□□□□ 0.04
MKS1-203ENST00000393120 CCDC62Q6P9F0 684 aa15.33■□□□□ 0.04
MKS1-203ENST00000393120 EFCAB13Q8IY85 973 aa15.33■□□□□ 0.04
MKS1-203ENST00000393120 SHCBP1Q8NEM2 672 aa15.33■□□□□ 0.04
MKS1-203ENST00000393120 UPF1Q92900 1129 aaKnown RBP eCLIP15.33■□□□□ 0.04
MKS1-203ENST00000393120 MMP19Q99542 508 aa15.33■□□□□ 0.04
MKS1-203ENST00000393120 JPH2Q9BR39 696 aaPredicted RBP15.33■□□□□ 0.04
MKS1-203ENST00000393120 R3HDMLQ9H3Y0 253 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms