RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 XPNPEP1Q9NQW7 623 aa21.19■□□□□ 0.98
TRAPPC3-204ENST00000373166 ANKEF1Q9NU02 776 aa21.19■□□□□ 0.98
TRAPPC3-204ENST00000373166 SF3B1O75533 1304 aaKnown RBP eCLIP21.19■□□□□ 0.986e-6■■■■■ 103.4
TRAPPC3-204ENST00000373166 KANSL1LA0AUZ9 987 aa21.18■□□□□ 0.98
TRAPPC3-204ENST00000373166 HNRNPA1P09651 372 aaKnown RBP eCLIP21.18■□□□□ 0.98
TRAPPC3-204ENST00000373166 SNW1Q13573 536 aaKnown RBP21.18■□□□□ 0.98
TRAPPC3-204ENST00000373166 CUL4AQ13619 759 aa21.18■□□□□ 0.98
TRAPPC3-204ENST00000373166 HSP90AA2PQ14568 343 aaPredicted RBP21.18■□□□□ 0.98
TRAPPC3-204ENST00000373166 RILPL1Q5EBL4 403 aa21.18■□□□□ 0.98
TRAPPC3-204ENST00000373166 LIN9Q5TKA1 542 aa21.18■□□□□ 0.98
TRAPPC3-204ENST00000373166 LARP1BQ659C4 914 aaKnown RBP21.18■□□□□ 0.98
TRAPPC3-204ENST00000373166 HAUS3Q68CZ6 603 aa21.18■□□□□ 0.98
TRAPPC3-204ENST00000373166 MTSS1LQ765P7 747 aa21.18■□□□□ 0.98
TRAPPC3-204ENST00000373166 DCLK2Q8N568 766 aa21.18■□□□□ 0.98
TRAPPC3-204ENST00000373166 RABGGTAQ92696 567 aa21.18■□□□□ 0.98
TRAPPC3-204ENST00000373166 NFKBIZQ9BYH8 718 aa21.18■□□□□ 0.98
TRAPPC3-204ENST00000373166 BCO2Q9BYV7 579 aa21.18■□□□□ 0.98
TRAPPC3-204ENST00000373166 DLL3Q9NYJ7 618 aa21.18■□□□□ 0.98
TRAPPC3-204ENST00000373166 KLK14Q9P0G3 267 aa21.18■□□□□ 0.98
TRAPPC3-204ENST00000373166 PARP2Q9UGN5 583 aa21.18■□□□□ 0.98
TRAPPC3-204ENST00000373166 PCDHB6Q9Y5E3 794 aa21.18■□□□□ 0.98
TRAPPC3-204ENST00000373166 LAD1O00515 517 aa21.17■□□□□ 0.98
TRAPPC3-204ENST00000373166 DGAT1O75907 488 aa21.17■□□□□ 0.98
TRAPPC3-204ENST00000373166 NPTXRO95502 500 aa21.17■□□□□ 0.98
TRAPPC3-204ENST00000373166 TOB1P50616 345 aaPredicted RBP21.17■□□□□ 0.98
TRAPPC3-204ENST00000373166 CAPSQ13938 189 aa21.17■□□□□ 0.98
TRAPPC3-204ENST00000373166 ZNF528Q3MIS6 628 aa21.17■□□□□ 0.98
TRAPPC3-204ENST00000373166 RTP2Q5QGT7 225 aa21.17■□□□□ 0.98
TRAPPC3-204ENST00000373166 PPM1LQ5SGD2 360 aa21.17■□□□□ 0.98
TRAPPC3-204ENST00000373166 PRSS55Q6UWB4 352 aaPredicted RBP21.17■□□□□ 0.98
TRAPPC3-204ENST00000373166 MAML2Q8IZL2 1156 aaPredicted RBP21.17■□□□□ 0.98
TRAPPC3-204ENST00000373166 ASAP3Q8TDY4 903 aa21.17■□□□□ 0.98
TRAPPC3-204ENST00000373166 TTPALQ9BTX7 342 aa21.17■□□□□ 0.98
TRAPPC3-204ENST00000373166 RAB34Q9BZG1 259 aa21.17■□□□□ 0.98
TRAPPC3-204ENST00000373166 SPATA6Q9NWH7 488 aaPredicted RBP21.17■□□□□ 0.98
TRAPPC3-204ENST00000373166 FBXW11Q9UKB1 542 aa21.17■□□□□ 0.98
TRAPPC3-204ENST00000373166 ZMYM2Q9UBW7 1377 aa21.17■□□□□ 0.98
TRAPPC3-204ENST00000373166 A0A1B0GUA9 196 aa21.16■□□□□ 0.98
TRAPPC3-204ENST00000373166 B4GALT5O43286 388 aa21.16■□□□□ 0.98
TRAPPC3-204ENST00000373166 LAMTOR5O43504 91 aa21.16■□□□□ 0.98
TRAPPC3-204ENST00000373166 LRRN2O75325 713 aa21.16■□□□□ 0.98
TRAPPC3-204ENST00000373166 ARL2P36404 184 aa21.16■□□□□ 0.98
TRAPPC3-204ENST00000373166 FXR2P51116 673 aaKnown RBP eCLIP21.16■□□□□ 0.98
TRAPPC3-204ENST00000373166 PRKCQQ04759 706 aa21.16■□□□□ 0.98
TRAPPC3-204ENST00000373166 PTGDRQ13258 359 aa21.16■□□□□ 0.98
TRAPPC3-204ENST00000373166 SLC44A4Q53GD3 710 aa21.16■□□□□ 0.98
TRAPPC3-204ENST00000373166 SUMF1Q8NBK3 374 aa21.16■□□□□ 0.98
TRAPPC3-204ENST00000373166 FGF13Q92913 245 aa21.16■□□□□ 0.98
TRAPPC3-204ENST00000373166 CLSTN3Q9BQT9 956 aa21.16■□□□□ 0.98
TRAPPC3-204ENST00000373166 POLR3CQ9BUI4 534 aaPredicted RBP21.16■□□□□ 0.98
TRAPPC3-204ENST00000373166 FBXO4Q9UKT5 387 aa21.16■□□□□ 0.98
TRAPPC3-204ENST00000373166 XYLBO75191 536 aa21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 MED24O75448 989 aa21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 C8AP07357 584 aa21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 SPATA31C1P0DKV0 1188 aa21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 XRCC6P12956 609 aaKnown RBP eCLIP21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 HOXA9P31269 272 aa21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 RARRES1P49788 294 aa21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 NTHL1P78549 312 aa21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 PFKPQ01813 784 aa21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 TUSC3Q13454 348 aa21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 MLF2Q15773 248 aaPredicted RBP21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 FAM171A1Q5VUB5 890 aa21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 CDR2LQ86X02 465 aaPredicted RBP21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 CATSPER3Q86XQ3 398 aa21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 CEP57Q86XR8 500 aa21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 C4orf32Q8N8J7 132 aa21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 PIGOQ8TEQ8 1089 aa21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 PIK3R5Q8WYR1 880 aa21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 DDX23Q9BUQ8 820 aaKnown RBP21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 OSBPL6Q9BZF3 934 aa21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 LRWD1Q9UFC0 647 aa21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 POLIQ9UNA4 740 aa21.15■□□□□ 0.98
TRAPPC3-204ENST00000373166 SPTLC1O15269 473 aa21.14■□□□□ 0.97
TRAPPC3-204ENST00000373166 PDCP20941 246 aa21.14■□□□□ 0.97
TRAPPC3-204ENST00000373166 GLRA2P23416 452 aa21.14■□□□□ 0.97
TRAPPC3-204ENST00000373166 RPA1P27694 616 aa21.14■□□□□ 0.97
TRAPPC3-204ENST00000373166 PRPHP41219 470 aa21.14■□□□□ 0.97
TRAPPC3-204ENST00000373166 UBXN2BQ14CS0 331 aa21.14■□□□□ 0.97
TRAPPC3-204ENST00000373166 PSMD5Q16401 504 aa21.14■□□□□ 0.97
TRAPPC3-204ENST00000373166 PDXDC1Q6P996 788 aa21.14■□□□□ 0.97
TRAPPC3-204ENST00000373166 RSPO2Q6UXX9 243 aaPredicted RBP21.14■□□□□ 0.97
TRAPPC3-204ENST00000373166 LNX1Q8TBB1 728 aaPredicted RBP21.14■□□□□ 0.97
TRAPPC3-204ENST00000373166 HASPINQ8TF76 798 aa21.14■□□□□ 0.97
TRAPPC3-204ENST00000373166 NACC1Q96RE7 527 aa21.14■□□□□ 0.97
TRAPPC3-204ENST00000373166 PAAF1Q9BRP4 392 aa21.14■□□□□ 0.97
TRAPPC3-204ENST00000373166 CACNG4Q9UBN1 327 aa21.14■□□□□ 0.97
TRAPPC3-204ENST00000373166 STK24Q9Y6E0 443 aa21.14■□□□□ 0.97
TRAPPC3-204ENST00000373166 FAM170BA6NMN3 283 aa21.13■□□□□ 0.97
TRAPPC3-204ENST00000373166 K7ELQ4 463 aaPredicted RBP21.13■□□□□ 0.97
TRAPPC3-204ENST00000373166 MUTP22033 750 aa21.13■□□□□ 0.97
TRAPPC3-204ENST00000373166 CCT6AP40227 531 aaKnown RBP21.13■□□□□ 0.97
TRAPPC3-204ENST00000373166 MAGEA9P43362 315 aa21.13■□□□□ 0.97
TRAPPC3-204ENST00000373166 RSPO4Q2I0M5 234 aaPredicted RBP21.13■□□□□ 0.97
TRAPPC3-204ENST00000373166 VARS2Q5ST30 1063 aaKnown RBP21.13■□□□□ 0.97
TRAPPC3-204ENST00000373166 ATRIPQ8WXE1 791 aa21.13■□□□□ 0.97
TRAPPC3-204ENST00000373166 NCDNQ9UBB6 729 aa21.13■□□□□ 0.97
TRAPPC3-204ENST00000373166 PCDHGA2Q9Y5H1 932 aa21.13■□□□□ 0.97
TRAPPC3-204ENST00000373166 VPS37CA5D8V6 355 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms