RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 DHX36Q9H2U1 1008 aaKnown RBP5.8□□□□□ -1.48
ATG4A-204ENST00000372246 JMJD4Q9H9V9 463 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 PCMTD2Q9NV79 361 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 PKD2L1Q9P0L9 805 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 ANKIB1Q9P2G1 1089 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 PRKAG3Q9UGI9 489 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 ASIC3Q9UHC3 531 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 CORO1CQ9ULV4 474 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-204ENST00000372246 NAALADL1Q9UQQ1 740 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 SLC27A5Q9Y2P5 690 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 WASF2Q9Y6W5 498 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 COL5A2P05997 1499 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-204ENST00000372246 UBR2Q8IWV8 1755 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 CCDC88AQ3V6T2 1871 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 NUP98P52948 1817 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 A0A1B0GUL6 1792 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 ZNF142P52746 1687 aaPredicted RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 NHSL1Q5SYE7 1610 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 SNED1Q8TER0 1413 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 TMEM150BA6NC51 233 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 GOLGA8IPA6NC78 632 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 GOLGA8JA6NMD2 632 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 SRRM3A6NNA2 597 aaPredicted RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 GOLGA8SH3BPF8 625 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 GOLGA8MH3BSY2 632 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 HIP1RO75146 1068 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 AGTP01019 485 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 GSTA1P08263 222 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 NEFHP12036 1026 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 TAC1P20366 129 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 TNFAIP3P21580 790 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 BTDP43251 543 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 RANBP1P43487 201 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 PAPOLAP51003 745 aaKnown RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 NEK3P51956 506 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 ITGA8P53708 1063 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 CACNB3P54284 484 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 EIF3BP55884 814 aaKnown RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 LACTBP83111 547 aaPredicted RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 EFTUD2Q15029 972 aaKnown RBP eCLIP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 COBLL1Q53SF7 1204 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 C6orf118Q5T5N4 469 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 ARMCX6Q7L4S7 300 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 ZNF804AQ7Z570 1209 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 KBTBD2Q8IY47 623 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 RPUSD2Q8IZ73 545 aaKnown RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 FBXO27Q8NI29 283 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 DHX38Q92620 1227 aaKnown RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 CENPTQ96BT3 561 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 SLC7A6OSQ96CW6 309 aaPredicted RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 SH3GL3Q99963 347 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 PITPNM3Q9BZ71 974 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 PRKD2Q9BZL6 878 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 NT5C3AQ9H0P0 336 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 DNAJC18Q9H819 358 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 MAGEF1Q9HAY2 307 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 RXFP1Q9HBX9 757 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 UBE2TQ9NPD8 197 aaPredicted RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 CCDC87Q9NVE4 849 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 NMRK1Q9NWW6 199 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 ARL2BPQ9Y2Y0 163 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 GOLGA6L10A0A0M3HER8 536 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 CFAP73A6NFT4 308 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 THAP12O43422 761 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 ZBED4O75132 1171 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 UNC5CO95185 931 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 S1PR4O95977 384 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 LDHBP07195 334 aaKnown RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 SPATA31C1P0DKV0 1188 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 PECAM1P16284 738 aaPredicted RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 SP100P23497 879 aaPredicted RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 SOX5P35711 763 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 COILP38432 576 aaPredicted RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 GCLMP48507 274 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 SCNN1BP51168 640 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 RCN2Q14257 317 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 SIX1Q15475 284 aaPredicted RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 SLC1A5Q15758 541 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 PKN2Q16513 984 aaKnown RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 LRRC36Q1X8D7 754 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 SBK1Q52WX2 424 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 TAF1BQ53T94 588 aaPredicted RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 SLC30A9Q6PML9 568 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 RNF207Q6ZRF8 634 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 ARMC9Q7Z3E5 817 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 TTC7BQ86TV6 843 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 MTDHQ86UE4 582 aaKnown RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 SLC47A2Q86VL8 602 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 COL23A1Q86Y22 540 aaPredicted RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 SLC25A41Q8N5S1 370 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 RFWD2Q8NHY2 731 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 WDR60Q8WVS4 1066 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 CKAP2Q8WWK9 683 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 HAUS1Q96CS2 278 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 CLPTM1LQ96KA5 538 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 CEP63Q96MT8 703 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 SPZ1Q9BXG8 430 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 EDEM3Q9BZQ6 932 aa5.79□□□□□ -1.48
ATG4A-204ENST00000372246 UBE2OQ9C0C9 1292 aaKnown RBP5.79□□□□□ -1.48
ATG4A-204ENST00000372246 RNPEPL1Q9HAU8 725 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms