RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 ECHDC2Q86YB7 292 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 PLEKHO2Q8TD55 490 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 FNBP1Q96RU3 617 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 NDST4Q9H3R1 872 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 PDE11AQ9HCR9 933 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 IL23AQ9NPF7 189 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 UBN1Q9NPG3 1134 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 HES2Q9Y543 173 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 ABHD14A-ACY1A0A1B0GW23 586 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 LRRIQ3A6PVS8 624 aaPredicted RBP17.19■□□□□ 0.34
TMEM53-204ENST00000372243 EFCAB14O75071 495 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 RECQL4O94761 1208 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 ATF7P17544 494 aaPredicted RBP17.19■□□□□ 0.34
TMEM53-204ENST00000372243 GTF2H1P32780 548 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 AP3M2P53677 418 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 UBASH3AP57075 661 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 DLG4P78352 724 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 KCNH2Q12809 1159 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 PPIGQ13427 754 aaKnown RBP eCLIP17.19■□□□□ 0.34
TMEM53-204ENST00000372243 TCTN1Q2MV58 587 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 FILIP1LQ4L180 1135 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 XKR4Q5GH76 650 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 DCAF17Q5H9S7 520 aaPredicted RBP17.19■□□□□ 0.34
TMEM53-204ENST00000372243 TCERG1LQ5VWI1 586 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 NT5DC4Q86YG4 428 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 CCDC127Q96BQ5 260 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 SNX27Q96L92 541 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 RTN4Q9NQC3 1192 aaKnown RBP17.19■□□□□ 0.34
TMEM53-204ENST00000372243 TAB2Q9NYJ8 693 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 GIT1Q9Y2X7 761 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 MICAL3Q7RTP6 2002 aa17.18■□□□□ 0.34
TMEM53-204ENST00000372243 PMM2O15305 246 aa17.18■□□□□ 0.34
TMEM53-204ENST00000372243 MEFVO15553 781 aaPredicted RBP17.18■□□□□ 0.34
TMEM53-204ENST00000372243 CBFA2T2O43439 604 aa17.18■□□□□ 0.34
TMEM53-204ENST00000372243 AFPP02771 609 aaKnown RBP17.18■□□□□ 0.34
TMEM53-204ENST00000372243 WNT7BP56706 349 aa17.18■□□□□ 0.34
TMEM53-204ENST00000372243 FPGSQ05932 587 aa17.18■□□□□ 0.34
TMEM53-204ENST00000372243 C1orf220Q5T0J3 134 aa17.18■□□□□ 0.34
TMEM53-204ENST00000372243 WDR49Q8IV35 697 aa17.18■□□□□ 0.34
TMEM53-204ENST00000372243 DPF3Q92784 378 aa17.18■□□□□ 0.34
TMEM53-204ENST00000372243 BADQ92934 168 aa17.18■□□□□ 0.34
TMEM53-204ENST00000372243 CGRRF1Q99675 332 aa17.18■□□□□ 0.34
TMEM53-204ENST00000372243 VPS16Q9H269 839 aa17.18■□□□□ 0.34
TMEM53-204ENST00000372243 RNF39Q9H2S5 420 aa17.18■□□□□ 0.34
TMEM53-204ENST00000372243 TMEM161AQ9NX61 479 aa17.18■□□□□ 0.34
TMEM53-204ENST00000372243 CNTN3Q9P232 1028 aa17.18■□□□□ 0.34
TMEM53-204ENST00000372243 PARP2Q9UGN5 583 aa17.18■□□□□ 0.34
TMEM53-204ENST00000372243 DERAQ9Y315 318 aa17.18■□□□□ 0.34
TMEM53-204ENST00000372243 C2CD2Q9Y426 696 aa17.18■□□□□ 0.34
TMEM53-204ENST00000372243 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.17■□□□□ 0.34
TMEM53-204ENST00000372243 LGALS16A8MUM7 142 aa17.17■□□□□ 0.34
TMEM53-204ENST00000372243 LACTBL1A8MY62 500 aa17.17■□□□□ 0.34
TMEM53-204ENST00000372243 RBAK-RBAKDNI3L0D1 243 aa17.17■□□□□ 0.34
TMEM53-204ENST00000372243 P4HA2O15460 535 aa17.17■□□□□ 0.34
TMEM53-204ENST00000372243 AP5Z1O43299 807 aa17.17■□□□□ 0.34
TMEM53-204ENST00000372243 BAIAP3O94812 1187 aa17.17■□□□□ 0.34
TMEM53-204ENST00000372243 TPM3P06753 285 aa17.17■□□□□ 0.34
TMEM53-204ENST00000372243 DLATP10515 647 aaKnown RBP17.17■□□□□ 0.34
TMEM53-204ENST00000372243 AKAP5P24588 427 aa17.17■□□□□ 0.34
TMEM53-204ENST00000372243 NR1I3Q14994 352 aa17.17■□□□□ 0.34
TMEM53-204ENST00000372243 AGMOQ6ZNB7 445 aa17.17■□□□□ 0.34
TMEM53-204ENST00000372243 NAP1L5Q96NT1 182 aaPredicted RBP17.17■□□□□ 0.34
TMEM53-204ENST00000372243 APOL6Q9BWW8 343 aa17.17■□□□□ 0.34
TMEM53-204ENST00000372243 IFNKQ9P0W0 207 aa17.17■□□□□ 0.34
TMEM53-204ENST00000372243 INPPL1O15357 1258 aa17.16■□□□□ 0.34
TMEM53-204ENST00000372243 N4BP1O75113 896 aaKnown RBP17.16■□□□□ 0.34
TMEM53-204ENST00000372243 TRIM49P0CI25 452 aa17.16■□□□□ 0.34
TMEM53-204ENST00000372243 TRIM49CP0CI26 452 aa17.16■□□□□ 0.34
TMEM53-204ENST00000372243 ACTN1P12814 892 aa17.16■□□□□ 0.34
TMEM53-204ENST00000372243 KCNE1P15382 129 aa17.16■□□□□ 0.34
TMEM53-204ENST00000372243 TNNI1P19237 187 aa17.16■□□□□ 0.34
TMEM53-204ENST00000372243 PLCB2Q00722 1185 aa17.16■□□□□ 0.34
TMEM53-204ENST00000372243 PPP3CAQ08209 521 aa17.16■□□□□ 0.34
TMEM53-204ENST00000372243 CRIPAKQ8N1N5 446 aa17.16■□□□□ 0.34
TMEM53-204ENST00000372243 RSPH1Q8WYR4 309 aa17.16■□□□□ 0.34
TMEM53-204ENST00000372243 FAM212AQ96EL1 285 aa17.16■□□□□ 0.34
TMEM53-204ENST00000372243 TRIM5Q9C035 493 aa17.16■□□□□ 0.34
TMEM53-204ENST00000372243 RSAD1Q9HA92 442 aa17.16■□□□□ 0.34
TMEM53-204ENST00000372243 TMEM8AQ9HCN3 771 aa17.16■□□□□ 0.34
TMEM53-204ENST00000372243 NR2E3Q9Y5X4 410 aa17.16■□□□□ 0.34
TMEM53-204ENST00000372243 PDCD11Q14690 1871 aaKnown RBP17.16■□□□□ 0.34
TMEM53-204ENST00000372243 GTPBP10A4D1E9 387 aaKnown RBP17.15■□□□□ 0.34
TMEM53-204ENST00000372243 FMO5P49326 533 aa17.15■□□□□ 0.34
TMEM53-204ENST00000372243 FKBP15Q5T1M5 1219 aa17.15■□□□□ 0.34
TMEM53-204ENST00000372243 KRT39Q6A163 491 aa17.15■□□□□ 0.34
TMEM53-204ENST00000372243 C15orf39Q6ZRI6 1047 aa17.15■□□□□ 0.34
TMEM53-204ENST00000372243 POP1Q99575 1024 aaKnown RBP17.15■□□□□ 0.34
TMEM53-204ENST00000372243 XPO4Q9C0E2 1151 aaKnown RBP17.15■□□□□ 0.34
TMEM53-204ENST00000372243 INTS13Q9NVM9 706 aa17.15■□□□□ 0.34
TMEM53-204ENST00000372243 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.15■□□□□ 0.34
TMEM53-204ENST00000372243 TTC3P53804 2025 aa17.15■□□□□ 0.34
TMEM53-204ENST00000372243 MEIS3P2A8K0S8 358 aa17.15■□□□□ 0.34
TMEM53-204ENST00000372243 MXI1P50539 228 aa17.15■□□□□ 0.34
TMEM53-204ENST00000372243 ZBTB6Q15916 424 aa17.15■□□□□ 0.34
TMEM53-204ENST00000372243 DUOXA2Q1HG44 320 aa17.15■□□□□ 0.34
TMEM53-204ENST00000372243 ZACNQ401N2 412 aa17.15■□□□□ 0.34
TMEM53-204ENST00000372243 JADE1Q6IE81 842 aa17.15■□□□□ 0.34
TMEM53-204ENST00000372243 PSRC1Q6PGN9 363 aaPredicted RBP17.15■□□□□ 0.34
TMEM53-204ENST00000372243 NPAS4Q8IUM7 802 aa17.15■□□□□ 0.34
TMEM53-204ENST00000372243 EFCAB13Q8IY85 973 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms