RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 CATSPERZQ9NTU4 200 aa0.61□□□□□ -2.31
RNU6-54P-201ENST00000365563 MAGEL2Q9UJ55 1249 aa0.61□□□□□ -2.31
RNU6-54P-201ENST00000365563 ADAM21Q9UKJ8 722 aa0.61□□□□□ -2.31
RNU6-54P-201ENST00000365563 ADAMTS5Q9UNA0 930 aa0.61□□□□□ -2.31
RNU6-54P-201ENST00000365563 PCDHB6Q9Y5E3 794 aa0.61□□□□□ -2.31
RNU6-54P-201ENST00000365563 KLF2Q9Y5W3 355 aaPredicted RBP0.61□□□□□ -2.31
RNU6-54P-201ENST00000365563 A0A087WYN8 130 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 A0A1B0GTW7 788 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 TCRBV5S4A2TA0A5A2 114 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 GOLGA6L22H0YM25 854 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 MYO1FO00160 1098 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 SCAMP3O14828 347 aaKnown RBP0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 HIP1RO75146 1068 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 JTBO76095 146 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 URI1O94763 535 aaPredicted RBP0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 GPANK1O95872 356 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 TTLL1O95922 423 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 TOMM40O96008 361 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 HNRNPCP07910 306 aaKnown RBP eCLIP0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 HNRNPLP14866 589 aaKnown RBP eCLIP0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 KRT15P19012 456 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 SDHAP31040 664 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 CASRP41180 1078 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 KCNJ4P48050 445 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 RRP1P56182 461 aaKnown RBP0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 BCAR1P56945 870 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 PAK1Q13153 545 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 RBMS2Q15434 407 aaKnown RBP0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 SF1Q15637 639 aaKnown RBP0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 CRY1Q16526 586 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 PROSER3Q2NL68 480 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 FAM47CQ5HY64 1035 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 B3GNTL1Q67FW5 361 aaPredicted RBP0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 ZNF324BQ6AW86 544 aaPredicted RBP0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 MIS18BP1Q6P0N0 1132 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 CEP85Q6P2H3 762 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 ZNF549Q6P9A3 640 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 UNC5BQ8IZJ1 945 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 LILRB2Q8N423 598 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 FBXW5Q969U6 566 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 NACC2Q96BF6 587 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 FUBP3Q96I24 572 aaKnown RBP eCLIP0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 PGBD1Q96JS3 809 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 SLITRK1Q96PX8 696 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 FAM118BQ9BPY3 351 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 ANO3Q9BYT9 981 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 SENP6Q9GZR1 1112 aaPredicted RBP0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 BCL11AQ9H165 835 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 RNF19AQ9NV58 838 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 KLHL11Q9NVR0 708 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 SERGEFQ9UGK8 458 aa0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 MTO1Q9Y2Z2 717 aaKnown RBP0.6□□□□□ -2.31
RNU6-54P-201ENST00000365563 FAM83GA6ND36 823 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 TBKBP1A7MCY6 615 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 LINC00473A8K010 186 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 RTL8CO15255 209 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 PROM1O43490 865 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 LDB3O75112 727 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 TULP3O75386 442 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 BCAR3O75815 825 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 DNAJB5O75953 348 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 BAG4O95429 457 aaKnown RBP0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 PRLP01236 227 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 APPP05067 770 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 UMODP07911 640 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 NGFRP08138 427 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 CLEC2LP0C7M8 214 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 SRGNP10124 158 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 PSG1P11464 419 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 KRT5P13647 590 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 PRG2P13727 222 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 NAT1P18440 290 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 DRD4P21917 467 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 GIPRP48546 466 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 CCT8P50990 548 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 CHN2P52757 468 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 ANTXR2P58335 489 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 DAZAP2Q15038 168 aaPredicted RBP0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 PTPRRQ15256 657 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 SF3B3Q15393 1217 aaKnown RBP0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 SLC1A5Q15758 541 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 CCDC6Q16204 474 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 CYP2A13Q16696 494 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 NAALADL2Q58DX5 795 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 PRAMEF17Q5VTA0 474 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 TSHZ3Q63HK5 1081 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 SLFN12LQ6IEE8 588 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 STYK1Q6J9G0 422 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 VWA1Q6PCB0 445 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 CATSPERGQ6ZRH7 1159 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 PDZD4Q76G19 769 aaPredicted RBP0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 ZNF804AQ7Z570 1209 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 RNF169Q8NCN4 708 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 CTCFLQ8NI51 663 aaPredicted RBP0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 WIPF2Q8TF74 440 aaPredicted RBP0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 TFAP2BQ92481 460 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 ERCC4Q92889 916 aaPredicted RBP0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 ATP2A3Q93084 1043 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 COQ8BQ96D53 544 aa0.59□□□□□ -2.31
RNU6-54P-201ENST00000365563 PHACTR3Q96KR7 559 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms