RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ZDHHC24Q6UX98 284 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 CERS5Q8N5B7 392 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 CCDC89Q8N998 374 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 CCHCR1Q8TD31 782 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 ACER1Q8TDN7 264 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 TLCD1Q96CP7 247 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 TRABDQ9H4I3 376 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 ADAM22Q9P0K1 906 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 EXOC7Q9UPT5 735 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 NAALADL1Q9UQQ1 740 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 STXBP5LQ9Y2K9 1186 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 ANXA13P27216 316 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 SREBF1P36956 1147 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 RASSF2P50749 326 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 GSCP56915 257 aaPredicted RBP7□□□□□ -1.29
CSDE1-203ENST00000358528 NCALDP61601 193 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 NOP14P78316 857 aaKnown RBP7□□□□□ -1.29
CSDE1-203ENST00000358528 DMP1Q13316 513 aaPredicted RBP7□□□□□ -1.29
CSDE1-203ENST00000358528 SPARCL1Q14515 664 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 MDH1BQ5I0G3 518 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 TMEM270Q6UE05 265 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 TRMT10CQ7L0Y3 403 aaKnown RBP7□□□□□ -1.29
CSDE1-203ENST00000358528 PPFIBP2Q8ND30 876 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 CHURC1Q8WUH1 139 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 MAIP1Q8WWC4 291 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 SPOCK2Q92563 424 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 TTC17Q96AE7 1141 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 IMPG2Q9BZV3 1241 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 SLCO1B3Q9NPD5 702 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 UBN1Q9NPG3 1134 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 SPATS2LQ9NUQ6 558 aaKnown RBP7□□□□□ -1.29
CSDE1-203ENST00000358528 GGA2Q9UJY4 613 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 ATXN2Q99700 1313 aaKnown RBP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 TBX3O15119 743 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 PPIP5K2O43314 1243 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 CDH16O75309 829 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 RRM1P23921 792 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 YY1P25490 414 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 LIG4P49917 911 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 POLE2P56282 527 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 JAM2P57087 298 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 TRAF1Q13077 416 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 BRDTQ58F21 947 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 FAM182AQ5T1J6 154 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 FAM228AQ86W67 206 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 EIF1ADQ8N9N8 165 aaKnown RBP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 CEP170P1Q96L14 293 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 PCDHB18PQ96TA0 734 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 CYTH2Q99418 400 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 POLR3CQ9BUI4 534 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 GINM1Q9NU53 330 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 ZDHHC18Q9NUE0 388 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 GRHL1Q9NZI5 618 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 ZFP69BQ9UJL9 534 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 SLIT2O94813 1529 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 COL18A1P39060 1754 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 EIF3DO15371 548 aaKnown RBP eCLIP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 CBX6O95503 412 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 TTC4O95801 387 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 NUDT17P0C025 328 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 ZSCAN5DPP0CG00 497 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 CYP11B1P15538 503 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 ITIH2P19823 946 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 CCND1P24385 295 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 MAGEA4P43358 317 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 ARSEP51690 589 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 IRX4P78413 519 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 PPATQ06203 517 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 PDIA2Q13087 525 aaKnown RBP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 RRP1BQ14684 758 aaKnown RBP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 CRYMQ14894 314 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 SNRNP35Q16560 246 aaKnown RBP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 KRT39Q6A163 491 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 CCDC62Q6P9F0 684 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 CYFIP1Q7L576 1253 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 APBB1IPQ7Z5R6 666 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 SLFN11Q7Z7L1 901 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 ATL2Q8NHH9 583 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 TAS1R2Q8TE23 839 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 ATXN2LQ8WWM7 1075 aaKnown RBP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 RMDN2Q96LZ7 410 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 CFAP57Q96MR6 1250 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 MKNK1Q9BUB5 465 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 WDR18Q9BV38 432 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 ZWILCHQ9H900 591 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 TUFT1Q9NNX1 390 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 OLFML3Q9NRN5 406 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 SEL1LQ9UBV2 794 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 ATF5Q9Y2D1 282 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 GTPBP10A4D1E9 387 aaKnown RBP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 FAM47DPA6NHR8 397 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 LRRIQ4A6NIV6 560 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 CLGNO14967 610 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 TLR3O15455 904 aaKnown RBP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 CPA2P48052 419 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 CLK2P49760 499 aaKnown RBP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 BASP1P80723 227 aaKnown RBP6.99□□□□□ -1.29
CSDE1-203ENST00000358528 HYIQ5T013 277 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 SCARA5Q6ZMJ2 495 aa6.99□□□□□ -1.29
CSDE1-203ENST00000358528 C1orf186Q6ZWK4 172 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms