RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 GJA9P57773 515 aa24.66■■□□□ 1.54
SCAMP3-202ENST00000355379 GCNT1Q02742 428 aa24.66■■□□□ 1.54
SCAMP3-202ENST00000355379 KYAT1Q16773 422 aa24.66■■□□□ 1.54
SCAMP3-202ENST00000355379 TMEM132AQ24JP5 1023 aa24.66■■□□□ 1.54
SCAMP3-202ENST00000355379 TDRD10Q5VZ19 366 aaKnown RBP24.66■■□□□ 1.54
SCAMP3-202ENST00000355379 EEF1DP3Q658K8 133 aa24.66■■□□□ 1.54
SCAMP3-202ENST00000355379 FAM71AQ8IYT1 594 aa24.66■■□□□ 1.54
SCAMP3-202ENST00000355379 PPM1KQ8N3J5 372 aa24.66■■□□□ 1.54
SCAMP3-202ENST00000355379 RNF10Q8N5U6 811 aaKnown RBP24.66■■□□□ 1.54
SCAMP3-202ENST00000355379 SLC30A5Q8TAD4 765 aa24.66■■□□□ 1.54
SCAMP3-202ENST00000355379 NLRP7Q8WX94 980 aa24.66■■□□□ 1.54
SCAMP3-202ENST00000355379 TRIB2Q92519 343 aa24.66■■□□□ 1.54
SCAMP3-202ENST00000355379 SHC3Q92529 594 aa24.66■■□□□ 1.54
SCAMP3-202ENST00000355379 CDT1Q9H211 546 aa24.66■■□□□ 1.54
SCAMP3-202ENST00000355379 NAGPAQ9UK23 515 aa24.66■■□□□ 1.54
SCAMP3-202ENST00000355379 PTPRJQ12913 1337 aa24.65■■□□□ 1.54
SCAMP3-202ENST00000355379 BTNL10A8MVZ5 291 aa24.65■■□□□ 1.54
SCAMP3-202ENST00000355379 SLU7O95391 586 aaKnown RBP24.65■■□□□ 1.54
SCAMP3-202ENST00000355379 HLA-DRAP01903 254 aa24.65■■□□□ 1.54
SCAMP3-202ENST00000355379 TNFSF9P41273 254 aa24.65■■□□□ 1.54
SCAMP3-202ENST00000355379 NKX3-2P78367 333 aa24.65■■□□□ 1.54
SCAMP3-202ENST00000355379 UPF3AQ9H1J1 476 aaKnown RBP24.65■■□□□ 1.54
SCAMP3-202ENST00000355379 INTUQ9ULD6 942 aa24.65■■□□□ 1.54
SCAMP3-202ENST00000355379 DDX3XO00571 662 aaKnown RBP eCLIP24.64■■□□□ 1.534e-11■■■■□ 20.8
SCAMP3-202ENST00000355379 TBC1D8O95759 1140 aa24.64■■□□□ 1.53
SCAMP3-202ENST00000355379 BEX3Q00994 111 aa24.64■■□□□ 1.53
SCAMP3-202ENST00000355379 SP3Q02447 781 aa24.64■■□□□ 1.53
SCAMP3-202ENST00000355379 SEZ6Q53EL9 994 aa24.64■■□□□ 1.53
SCAMP3-202ENST00000355379 WDR44Q5JSH3 913 aa24.64■■□□□ 1.53
SCAMP3-202ENST00000355379 ALKBH5Q6P6C2 394 aaKnown RBP24.64■■□□□ 1.53
SCAMP3-202ENST00000355379 OLIG1Q8TAK6 271 aa24.64■■□□□ 1.53
SCAMP3-202ENST00000355379 ADAMTS10Q9H324 1103 aa24.64■■□□□ 1.53
SCAMP3-202ENST00000355379 C1orf112Q9NSG2 853 aa24.64■■□□□ 1.53
SCAMP3-202ENST00000355379 DUSP10Q9Y6W6 482 aa24.64■■□□□ 1.53
SCAMP3-202ENST00000355379 TULP1O00294 542 aaPredicted RBP24.63■■□□□ 1.53
SCAMP3-202ENST00000355379 DYNC1I1O14576 645 aa24.63■■□□□ 1.53
SCAMP3-202ENST00000355379 TACC1O75410 805 aa24.63■■□□□ 1.53
SCAMP3-202ENST00000355379 VNN1O95497 513 aa24.63■■□□□ 1.53
SCAMP3-202ENST00000355379 PIK3CAP42336 1068 aa24.63■■□□□ 1.53
SCAMP3-202ENST00000355379 IRX5P78411 483 aaPredicted RBP24.63■■□□□ 1.53
SCAMP3-202ENST00000355379 PURAQ00577 322 aaKnown RBP24.63■■□□□ 1.53
SCAMP3-202ENST00000355379 BIRC3Q13489 604 aa24.63■■□□□ 1.53
SCAMP3-202ENST00000355379 LMBRD2Q68DH5 695 aaPredicted RBP24.63■■□□□ 1.53
SCAMP3-202ENST00000355379 ZNF710Q8N1W2 664 aa24.63■■□□□ 1.53
SCAMP3-202ENST00000355379 TRIM58Q8NG06 486 aa24.63■■□□□ 1.53
SCAMP3-202ENST00000355379 KAT5Q92993 513 aa24.63■■□□□ 1.53
SCAMP3-202ENST00000355379 MRFAP1Q9Y605 127 aa24.63■■□□□ 1.53
SCAMP3-202ENST00000355379 IL18RAPO95256 599 aa24.62■■□□□ 1.53
SCAMP3-202ENST00000355379 CYP2C9P11712 490 aa24.62■■□□□ 1.53
SCAMP3-202ENST00000355379 HOXC8P31273 242 aa24.62■■□□□ 1.53
SCAMP3-202ENST00000355379 PRKCZQ05513 592 aa24.62■■□□□ 1.53
SCAMP3-202ENST00000355379 PCBP1Q15365 356 aaKnown RBP eCLIP24.62■■□□□ 1.53
SCAMP3-202ENST00000355379 SMYD5Q6GMV2 418 aa24.62■■□□□ 1.53
SCAMP3-202ENST00000355379 LNX1Q8TBB1 728 aaPredicted RBP24.62■■□□□ 1.53
SCAMP3-202ENST00000355379 TATDN2Q93075 761 aa24.62■■□□□ 1.53
SCAMP3-202ENST00000355379 PDZD7Q9H5P4 517 aa24.62■■□□□ 1.53
SCAMP3-202ENST00000355379 B4GALT4O60513 344 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 TSPAN1O60635 241 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 GNAT1P11488 350 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 ARF4P18085 180 aaPredicted RBP24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 TNFAIP3P21580 790 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 OR5B17Q8NGF7 314 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 ERO1AQ96HE7 468 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 SCLT1Q96NL6 688 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 AGPAT1Q99943 283 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 GCOM2Q9BZD3 368 aaPredicted RBP24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 ANO9A1A5B4 782 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 MACROD2A1Z1Q3 448 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 GPR25O00155 361 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 SEPT4O43236 478 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 GPR32O75388 356 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 ERLIN2O94905 339 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 CLTAP09496 248 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 APLP1P51693 650 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 DUOXA2Q1HG44 320 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 THNSL1Q8IYQ7 743 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 PPP1R16BQ96T49 567 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 MTG1Q9BT17 334 aaPredicted RBP24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 RPF1Q9H9Y2 349 aaKnown RBP24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 SPC25Q9HBM1 224 aa24.61■■□□□ 1.53
SCAMP3-202ENST00000355379 TRIP12Q14669 1992 aaPredicted RBP24.6■■□□□ 1.53
SCAMP3-202ENST00000355379 C17orf102A2RUQ5 167 aa24.6■■□□□ 1.53
SCAMP3-202ENST00000355379 PHACTR2O75167 634 aa24.6■■□□□ 1.53
SCAMP3-202ENST00000355379 CHMP4BP1P59074 171 aa24.6■■□□□ 1.53
SCAMP3-202ENST00000355379 NOX5Q96PH1 765 aa24.6■■□□□ 1.53
SCAMP3-202ENST00000355379 ALS2CR12Q96Q35 445 aa24.6■■□□□ 1.53
SCAMP3-202ENST00000355379 PI4K2AQ9BTU6 479 aa24.6■■□□□ 1.53
SCAMP3-202ENST00000355379 CDC23Q9UJX2 597 aa24.6■■□□□ 1.53
SCAMP3-202ENST00000355379 MYH10P35580 1976 aa24.59■■□□□ 1.53
SCAMP3-202ENST00000355379 A0A1B0GUA9 196 aa24.59■■□□□ 1.53
SCAMP3-202ENST00000355379 H2AFZP0C0S5 128 aa24.59■■□□□ 1.53
SCAMP3-202ENST00000355379 C6orf222P0C671 652 aaPredicted RBP24.59■■□□□ 1.53
SCAMP3-202ENST00000355379 NCOA4Q13772 614 aa24.59■■□□□ 1.53
SCAMP3-202ENST00000355379 HIC1Q14526 733 aa24.59■■□□□ 1.53
SCAMP3-202ENST00000355379 PAPD7Q5XG87 772 aaKnown RBP24.59■■□□□ 1.53
SCAMP3-202ENST00000355379 H2AFVQ71UI9 128 aa24.59■■□□□ 1.53
SCAMP3-202ENST00000355379 NME8Q8N427 588 aa24.59■■□□□ 1.53
SCAMP3-202ENST00000355379 U2AF1L4Q8WU68 220 aaKnown RBP24.59■■□□□ 1.53
SCAMP3-202ENST00000355379 DHX38Q92620 1227 aaKnown RBP24.59■■□□□ 1.53
SCAMP3-202ENST00000355379 FAM49AQ9H0Q0 323 aaPredicted RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms