RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 JDP2Q8WYK2 163 aa19.21■□□□□ 0.67
CTSB-202ENST00000353047 SNF8Q96H20 258 aa19.21■□□□□ 0.67
CTSB-202ENST00000353047 SIX2Q9NPC8 291 aa19.21■□□□□ 0.67
CTSB-202ENST00000353047 TLR3O15455 904 aaKnown RBP19.21■□□□□ 0.67
CTSB-202ENST00000353047 DDX3YO15523 660 aaKnown RBP19.21■□□□□ 0.67
CTSB-202ENST00000353047 CDR2LQ86X02 465 aaPredicted RBP19.21■□□□□ 0.67
CTSB-202ENST00000353047 PDCD7Q8N8D1 485 aaKnown RBP19.21■□□□□ 0.67
CTSB-202ENST00000353047 RMDN2Q96LZ7 410 aa19.21■□□□□ 0.67
CTSB-202ENST00000353047 WDR18Q9BV38 432 aa19.21■□□□□ 0.67
CTSB-202ENST00000353047 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.21■□□□□ 0.67
CTSB-202ENST00000353047 SNX3O60493 162 aa19.21■□□□□ 0.67
CTSB-202ENST00000353047 DGKZQ13574 1117 aa19.21■□□□□ 0.67
CTSB-202ENST00000353047 COA1Q9GZY4 146 aa19.21■□□□□ 0.67
CTSB-202ENST00000353047 TRABDQ9H4I3 376 aa19.21■□□□□ 0.67
CTSB-202ENST00000353047 G3BP2Q9UN86 482 aaKnown RBP19.21■□□□□ 0.67
CTSB-202ENST00000353047 SPEF2Q9C093 1822 aa19.2■□□□□ 0.66
CTSB-202ENST00000353047 PPFIA2O75334 1257 aa19.2■□□□□ 0.66
CTSB-202ENST00000353047 ORC1Q13415 861 aa19.2■□□□□ 0.66
CTSB-202ENST00000353047 KCNT1Q5JUK3 1230 aa19.2■□□□□ 0.66
CTSB-202ENST00000353047 RSAD2Q8WXG1 361 aa19.2■□□□□ 0.66
CTSB-202ENST00000353047 MIEF2Q96C03 454 aa19.2■□□□□ 0.66
CTSB-202ENST00000353047 MRPL11Q9Y3B7 192 aaKnown RBP19.2■□□□□ 0.66
CTSB-202ENST00000353047 RARGP13631 454 aa19.2■□□□□ 0.66
CTSB-202ENST00000353047 NBPF20Q3BBV1 942 aa19.2■□□□□ 0.66
CTSB-202ENST00000353047 USP37Q86T82 979 aa19.2■□□□□ 0.66
CTSB-202ENST00000353047 TTC16Q8NEE8 873 aa19.2■□□□□ 0.66
CTSB-202ENST00000353047 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.2■□□□□ 0.66
CTSB-202ENST00000353047 SHCBP1LQ9BZQ2 653 aa19.2■□□□□ 0.66
CTSB-202ENST00000353047 R3HDM2Q9Y2K5 976 aaKnown RBP19.2■□□□□ 0.66
CTSB-202ENST00000353047 PCDHA2Q9Y5H9 948 aa19.2■□□□□ 0.66
CTSB-202ENST00000353047 E2F8A0AVK6 867 aa19.2■□□□□ 0.66
CTSB-202ENST00000353047 ARHGAP42A6NI28 874 aa19.2■□□□□ 0.66
CTSB-202ENST00000353047 O00370 1275 aa19.2■□□□□ 0.66
CTSB-202ENST00000353047 SLC16A3O15427 465 aaKnown RBP19.2■□□□□ 0.66
CTSB-202ENST00000353047 WNT8AQ9H1J5 351 aa19.2■□□□□ 0.66
CTSB-202ENST00000353047 KIF1AQ12756 1690 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 CDO1Q16878 200 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 CROCCP2Q86T23 111 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 LDHDQ86WU2 507 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 CHURC1Q8WUH1 139 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 LRRN4Q8WUT4 740 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 KDM4CQ9H3R0 1056 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.19■□□□□ 0.669e-19■■□□□ 12.3
CTSB-202ENST00000353047 CYP11B1P15538 503 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 HSPA6P17066 643 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 TSNAXIP1Q2TAA8 658 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 ARHGEF16Q5VV41 709 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 NLRX1Q86UT6 975 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 CYP4X1Q8N118 509 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 KAT6AQ92794 2004 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 PRKCIP41743 596 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 RASSF2P50749 326 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 CASC4Q6P4E1 433 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 ZNF572Q7Z3I7 529 aaPredicted RBP19.19■□□□□ 0.66
CTSB-202ENST00000353047 ETNPPLQ8TBG4 499 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 GRK7Q8WTQ7 553 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 RAB3IPQ96QF0 476 aaPredicted RBP19.19■□□□□ 0.66
CTSB-202ENST00000353047 SLC13A1Q9BZW2 595 aa19.19■□□□□ 0.66
CTSB-202ENST00000353047 RPTORQ8N122 1335 aa19.18■□□□□ 0.66
CTSB-202ENST00000353047 CALRP27797 417 aaKnown RBP19.18■□□□□ 0.66
CTSB-202ENST00000353047 EPHB2P29323 1055 aa19.18■□□□□ 0.66
CTSB-202ENST00000353047 MTMR1Q13613 665 aa19.18■□□□□ 0.66
CTSB-202ENST00000353047 KRT39Q6A163 491 aa19.18■□□□□ 0.66
CTSB-202ENST00000353047 YTHDF3Q7Z739 585 aaKnown RBP19.18■□□□□ 0.66
CTSB-202ENST00000353047 PYROXD1Q8WU10 500 aa19.18■□□□□ 0.66
CTSB-202ENST00000353047 DCAF4Q8WV16 495 aa19.18■□□□□ 0.66
CTSB-202ENST00000353047 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.18■□□□□ 0.662e-8■□□□□ 11
CTSB-202ENST00000353047 TTC1Q99614 292 aa19.18■□□□□ 0.66
CTSB-202ENST00000353047 ZFP69BQ9UJL9 534 aa19.18■□□□□ 0.66
CTSB-202ENST00000353047 MAD1L1Q9Y6D9 718 aa19.18■□□□□ 0.66
CTSB-202ENST00000353047 TROVE2P10155 538 aaKnown RBP eCLIP19.18■□□□□ 0.66
CTSB-202ENST00000353047 OTOP1Q7RTM1 612 aa19.18■□□□□ 0.66
CTSB-202ENST00000353047 ZNF341Q9BYN7 854 aa19.18■□□□□ 0.66
CTSB-202ENST00000353047 MARF1Q9Y4F3 1742 aaKnown RBP19.18■□□□□ 0.66
CTSB-202ENST00000353047 MAGEA4P43358 317 aa19.18■□□□□ 0.66
CTSB-202ENST00000353047 BIRC2Q13490 618 aa19.18■□□□□ 0.66
CTSB-202ENST00000353047 DLGAP5Q15398 846 aa19.18■□□□□ 0.66
CTSB-202ENST00000353047 CCDC62Q6P9F0 684 aa19.18■□□□□ 0.66
CTSB-202ENST00000353047 ZDHHC24Q6UX98 284 aa19.18■□□□□ 0.66
CTSB-202ENST00000353047 FITM2Q8N6M3 262 aa19.18■□□□□ 0.66
CTSB-202ENST00000353047 TMEM206Q9H813 350 aa19.18■□□□□ 0.66
CTSB-202ENST00000353047 KCNH7Q9NS40 1196 aa19.18■□□□□ 0.66
CTSB-202ENST00000353047 WRAP73Q9P2S5 460 aaPredicted RBP19.18■□□□□ 0.66
CTSB-202ENST00000353047 DISP2A7MBM2 1401 aa19.17■□□□□ 0.66
CTSB-202ENST00000353047 ENTPD5O75356 428 aa19.17■□□□□ 0.66
CTSB-202ENST00000353047 MMP10P09238 476 aa19.17■□□□□ 0.66
CTSB-202ENST00000353047 CHRNA5P30532 468 aa19.17■□□□□ 0.66
CTSB-202ENST00000353047 SPARCL1Q14515 664 aa19.17■□□□□ 0.66
CTSB-202ENST00000353047 PPFIBP2Q8ND30 876 aa19.17■□□□□ 0.66
CTSB-202ENST00000353047 FBXL13Q8NEE6 735 aa19.17■□□□□ 0.66
CTSB-202ENST00000353047 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.17■□□□□ 0.66
CTSB-202ENST00000353047 CFAP36Q96G28 342 aa19.17■□□□□ 0.66
CTSB-202ENST00000353047 EXOC7Q9UPT5 735 aa19.17■□□□□ 0.66
CTSB-202ENST00000353047 NEU2Q9Y3R4 380 aa19.17■□□□□ 0.66
CTSB-202ENST00000353047 MAPK13O15264 365 aa19.17■□□□□ 0.66
CTSB-202ENST00000353047 VCAM1P19320 739 aa19.17■□□□□ 0.66
CTSB-202ENST00000353047 YWHABP31946 246 aaKnown RBP19.17■□□□□ 0.66
CTSB-202ENST00000353047 OSBPL8Q9BZF1 889 aa19.17■□□□□ 0.66
CTSB-202ENST00000353047 MCM8Q9UJA3 840 aa19.17■□□□□ 0.66
CTSB-202ENST00000353047 ZBED4O75132 1171 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms