RNA–Protein interactions for RNA: ENST00000350773.8

TSC2-202, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-202ENST00000350773 NBPF3Q9H094 633 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 CYP4F11Q9HBI6 524 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.95■□□□□ 0.3
TSC2-202ENST00000350773 FAM47DPA6NHR8 397 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 FXR2P51116 673 aaKnown RBP eCLIP16.95■□□□□ 0.3
TSC2-202ENST00000350773 MAPRE2Q15555 327 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 C1orf228Q6PIY5 440 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 SETD1BQ9UPS6 1966 aaKnown RBP16.95■□□□□ 0.3
TSC2-202ENST00000350773 MMP10P09238 476 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 ARHGDIAP52565 204 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 AP1B1Q10567 949 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 ANKS1AQ92625 1134 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 SENP7Q9BQF6 1050 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 POLR3CQ9BUI4 534 aaPredicted RBP16.95■□□□□ 0.3
TSC2-202ENST00000350773 FAM49AQ9H0Q0 323 aaPredicted RBP16.95■□□□□ 0.3
TSC2-202ENST00000350773 ING2Q9H160 280 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 GGT7Q9UJ14 662 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 DBR1Q9UK59 544 aaKnown RBP16.95■□□□□ 0.3
TSC2-202ENST00000350773 PPME1Q9Y570 386 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 EIF3DO15371 548 aaKnown RBP eCLIP16.95■□□□□ 0.3
TSC2-202ENST00000350773 SNX2O60749 519 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 EFHC2Q5JST6 749 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 TRAPPC11Q7Z392 1133 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 FUCA2Q9BTY2 467 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 HERC5Q9UII4 1024 aaKnown RBP16.95■□□□□ 0.3
TSC2-202ENST00000350773 CAMSAP1Q5T5Y3 1602 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 H3BRJ5 948 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 PTPAQ15257 358 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 KRT27Q7Z3Y8 459 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 LONP2Q86WA8 852 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 TTLL6Q8N841 843 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 NCLNQ969V3 563 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 DNAJC7Q99615 494 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 TSSK1BQ9BXA7 367 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 RANBP17Q9H2T7 1088 aaKnown RBP16.95■□□□□ 0.3
TSC2-202ENST00000350773 KIF9Q9HAQ2 790 aa16.95■□□□□ 0.3
TSC2-202ENST00000350773 PIK3R2O00459 728 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 MYBP10242 640 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 CCND1P24385 295 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 PLA2G4AP47712 749 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 GRAMD4Q6IC98 578 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 FRA10AC1Q70Z53 315 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 CEP19Q96LK0 163 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 ERP44Q9BS26 406 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 FAM129AQ9BZQ8 928 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 LRFN2Q9ULH4 789 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 FLT1P17948 1338 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 PPP1R12AO14974 1030 aaPredicted RBP16.94■□□□□ 0.3
TSC2-202ENST00000350773 CUL3Q13618 768 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 DNAL1Q4LDG9 190 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 PNKPQ96T60 521 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 FUT8Q9BYC5 575 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 DHX35Q9H5Z1 703 aaKnown RBP16.94■□□□□ 0.3
TSC2-202ENST00000350773 ARPP19P56211 112 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 THEM5Q8N1Q8 247 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 KCTD17Q8N5Z5 321 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 RNF103-CHMP3A0A140T963 221 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 SLC9A1P19634 815 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 KDM7AQ6ZMT4 941 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 RIBC1Q8N443 379 aaPredicted RBP16.94■□□□□ 0.3
TSC2-202ENST00000350773 MKNK1Q9BUB5 465 aa16.94■□□□□ 0.3
TSC2-202ENST00000350773 FAM217BQ9NTX9 383 aaPredicted RBP16.94■□□□□ 0.3
TSC2-202ENST00000350773 EFNA5P52803 228 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 KYAT1Q16773 422 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 LDHDQ86WU2 507 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 TRAF3IP3Q9Y228 551 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 NEU2Q9Y3R4 380 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 SNX5Q9Y5X3 404 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 CCT8L1PA6NM43 557 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 E2F6O75461 281 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 ERVK-24P63145 666 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 GRIN1Q05586 938 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 KLHDC7AQ5VTJ3 777 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 ZBTB24O43167 697 aaPredicted RBP16.93■□□□□ 0.3
TSC2-202ENST00000350773 KLRC1P26715 233 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 C16orf87Q6PH81 154 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 ZNF34Q8IZ26 560 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 TEX9Q8N6V9 391 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 C3orf20Q8ND61 904 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 SLC30A5Q8TAD4 765 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 IFT43Q96FT9 208 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 C16orf86Q6ZW13 317 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 ARHGEF1Q92888 912 aaKnown RBP16.93■□□□□ 0.3
TSC2-202ENST00000350773 WDR35Q9P2L0 1181 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 WARS2Q9UGM6 360 aaKnown RBP16.93■□□□□ 0.3
TSC2-202ENST00000350773 PNMA3Q9UL41 463 aa16.93■□□□□ 0.3
TSC2-202ENST00000350773 POU5F1BQ06416 359 aa16.92■□□□□ 0.3
TSC2-202ENST00000350773 NSUN2Q08J23 767 aaKnown RBP eCLIP16.92■□□□□ 0.3
TSC2-202ENST00000350773 CYFIP1Q7L576 1253 aa16.92■□□□□ 0.3
TSC2-202ENST00000350773 ARL8AQ96BM9 186 aa16.92■□□□□ 0.3
TSC2-202ENST00000350773 NPHS2Q9NP85 383 aa16.92■□□□□ 0.3
TSC2-202ENST00000350773 A0A0G2JLW4 131 aa16.92■□□□□ 0.3
TSC2-202ENST00000350773 TMEM259Q4ZIN3 620 aa16.92■□□□□ 0.3
TSC2-202ENST00000350773 SP8Q8IXZ3 490 aa16.92■□□□□ 0.3
TSC2-202ENST00000350773 DAGLBQ8NCG7 672 aa16.92■□□□□ 0.3
TSC2-202ENST00000350773 ALG13Q9NP73 1137 aaKnown RBP16.92■□□□□ 0.3
TSC2-202ENST00000350773 HPSEQ9Y251 543 aa16.92■□□□□ 0.3
TSC2-202ENST00000350773 ENO1P06733 434 aaKnown RBP16.92■□□□□ 0.3
TSC2-202ENST00000350773 ALDH18A1P54886 795 aaKnown RBP16.92■□□□□ 0.3
TSC2-202ENST00000350773 SF3B3Q15393 1217 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms