RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 USP44Q9H0E7 712 aa8.51□□□□□ -1.05
UBE2D3-204ENST00000349311 GCM1Q9NP62 436 aa8.51□□□□□ -1.05
UBE2D3-204ENST00000349311 DCP1AQ9NPI6 582 aaPredicted RBP8.51□□□□□ -1.05
UBE2D3-204ENST00000349311 TMEM260Q9NX78 707 aa8.51□□□□□ -1.05
UBE2D3-204ENST00000349311 HOOK1Q9UJC3 728 aaKnown RBP8.51□□□□□ -1.05
UBE2D3-204ENST00000349311 TUBE1Q9UJT0 475 aa8.51□□□□□ -1.05
UBE2D3-204ENST00000349311 ODF2LQ9ULJ1 636 aa8.51□□□□□ -1.05
UBE2D3-204ENST00000349311 IRS2Q9Y4H2 1338 aa8.51□□□□□ -1.05
UBE2D3-204ENST00000349311 ECM29Q5VYK3 1845 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 TEX51A0A1B0GUA7 166 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 GOLGA6L7A0A1B0GV03 622 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 PRAMEF22A3QJZ6 481 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 GOLGA6CA6NDK9 693 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 SRRM3A6NNA2 597 aaPredicted RBP8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 LRRIQ3A6PVS8 624 aaPredicted RBP8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 AKR1B15C9JRZ8 316 aaPredicted RBP8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 ANKRD65E5RJM6 399 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 NEBLO76041 1014 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 FARP2O94887 1054 aaPredicted RBP8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 FUCA1P04066 466 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 RHOXF2BP0C7M4 288 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 GOLGA6DP0CG33 693 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 EZRP15311 586 aaKnown RBP8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 SCP2P22307 547 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 CMA1P23946 247 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 TACR1P25103 407 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 FNTAP49354 379 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 CDR1P51861 262 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 NDUFA8P51970 172 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 USP14P54578 494 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 MTX1Q13505 466 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 PROSER3Q2NL68 480 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 CCDC70Q6NSX1 233 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 LBX2Q6XYB7 198 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 MAMDC2Q7Z304 686 aaPredicted RBP8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 BRAPQ7Z569 592 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 DDX60Q8IY21 1712 aaKnown RBP8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 ELOA2Q8IYF1 753 aaPredicted RBP8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 TC2NQ8N9U0 490 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 MARCH10Q8NA82 808 aaPredicted RBP8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 COG1Q8WTW3 980 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 DPF2Q92785 391 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 ZKSCAN4Q969J2 545 aaPredicted RBP8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 RNPC3Q96LT9 517 aaKnown RBP8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 NEK1Q96PY6 1258 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 CDC6Q99741 560 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 RHOXF2Q9BQY4 288 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 TRIM6Q9C030 488 aaPredicted RBP8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 PLEKHA4Q9H4M7 779 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 ACTR5Q9H9F9 607 aaPredicted RBP8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 GOLGA6AQ9NYA3 693 aa8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 MBD1Q9UIS9 605 aaPredicted RBP8.5□□□□□ -1.05
UBE2D3-204ENST00000349311 RGPD3A6NKT7 1758 aaPredicted RBP8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 RGPD4Q7Z3J3 1758 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 A0A087WWV3 80 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 A0A1B0GVL5 298 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 PTPDC1A2A3K4 754 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 SPTLC2O15270 562 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 ZEB2O60315 1214 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 CLSTN1O94985 981 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 ZNF202O95125 648 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 STARD3NLO95772 234 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 NBPF7P0C2Y1 421 aaPredicted RBP8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 MED14OSP0DP75 135 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 VIPR1P32241 457 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 GPR85P60893 370 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 GNGT1P63211 74 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 IFFO1Q0D2I5 559 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 BIRC2Q13490 618 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 ZNF569Q5MCW4 686 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 CEP85LQ5SZL2 805 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 BICRALQ6AI39 1079 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 WWC2Q6AWC2 1192 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 Q6ZUG5 572 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 KIAA1328Q86T90 577 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 TAX1BP1Q86VP1 789 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 NSUN7Q8NE18 718 aaKnown RBP8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 GSTCDQ8NEC7 633 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 PLBD2Q8NHP8 589 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 BCAS4Q8TDM0 211 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 SH3TC2Q8TF17 1288 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 FAXDC2Q96IV6 333 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 FAM210AQ96ND0 272 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 SH3GL3Q99963 347 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 KAT14Q9H8E8 782 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 BATF3Q9NR55 127 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 MARCH2Q9P0N8 246 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 MAP3K2Q9Y2U5 619 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 PCDHA2Q9Y5H9 948 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 SCN7AQ01118 1682 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 C4AP0C0L4 1744 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 C4BP0C0L5 1744 aa8.49□□□□□ -1.05
UBE2D3-204ENST00000349311 C22orf46C9J442 243 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 TMEM232C9JQI7 657 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 PES1O00541 588 aaKnown RBP8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 SEMA7AO75326 666 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 ATP1A3P13637 1013 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 FPR2P25090 351 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 SLC8A1P32418 973 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms