RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 ADPGKQ9BRR6 497 aa20.18■□□□□ 0.82
PTN-201ENST00000348225 DDX20Q9UHI6 824 aaKnown RBP20.18■□□□□ 0.82
PTN-201ENST00000348225 REXO2Q9Y3B8 237 aaKnown RBP20.18■□□□□ 0.82
PTN-201ENST00000348225 C4BPAP04003 597 aaKnown RBP20.17■□□□□ 0.82
PTN-201ENST00000348225 MFAP3P55082 362 aa20.17■□□□□ 0.82
PTN-201ENST00000348225 ETF1P62495 437 aaKnown RBP20.17■□□□□ 0.82
PTN-201ENST00000348225 TMEM62Q0P6H9 643 aa20.17■□□□□ 0.82
PTN-201ENST00000348225 ARHGAP44Q17R89 818 aa20.17■□□□□ 0.82
PTN-201ENST00000348225 ASTE1Q2TB18 679 aaPredicted RBP20.17■□□□□ 0.82
PTN-201ENST00000348225 ZNF662Q6ZS27 426 aa20.17■□□□□ 0.82
PTN-201ENST00000348225 GPIHBP1Q8IV16 184 aa20.17■□□□□ 0.82
PTN-201ENST00000348225 ARHGEF19Q8IW93 802 aa20.17■□□□□ 0.82
PTN-201ENST00000348225 THNSL1Q8IYQ7 743 aa20.17■□□□□ 0.82
PTN-201ENST00000348225 PCSK9Q8NBP7 692 aaKnown RBP20.17■□□□□ 0.82
PTN-201ENST00000348225 KLHDC9Q8NEP7 349 aa20.17■□□□□ 0.82
PTN-201ENST00000348225 ZNF516Q92618 1163 aa20.17■□□□□ 0.82
PTN-201ENST00000348225 SEMA4DQ92854 862 aa20.17■□□□□ 0.82
PTN-201ENST00000348225 LUC7LQ9NQ29 371 aaKnown RBP20.17■□□□□ 0.82
PTN-201ENST00000348225 LZTFL1Q9NQ48 299 aa20.17■□□□□ 0.82
PTN-201ENST00000348225 GTF2IRD1Q9UHL9 959 aa20.17■□□□□ 0.82
PTN-201ENST00000348225 GINS2Q9Y248 185 aa20.17■□□□□ 0.82
PTN-201ENST00000348225 IL18RAPO95256 599 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 DARSP14868 501 aaKnown RBP20.16■□□□□ 0.82
PTN-201ENST00000348225 PIK3CAP42336 1068 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 WNT7BP56706 349 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 NBPF20Q3BBV1 942 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 TDRD10Q5VZ19 366 aaKnown RBP20.16■□□□□ 0.82
PTN-201ENST00000348225 LMBRD2Q68DH5 695 aaPredicted RBP20.16■□□□□ 0.82
PTN-201ENST00000348225 RNF180Q86T96 592 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 VPS36Q86VN1 386 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 PPM1KQ8N3J5 372 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 ZNF296Q8WUU4 475 aaPredicted RBP20.16■□□□□ 0.82
PTN-201ENST00000348225 CPB2Q96IY4 423 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 OSMRQ99650 979 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 HAUS4Q9H6D7 363 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 RPF1Q9H9Y2 349 aaKnown RBP20.16■□□□□ 0.82
PTN-201ENST00000348225 C1orf112Q9NSG2 853 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 TRIP12Q14669 1992 aaPredicted RBP20.16■□□□□ 0.82
PTN-201ENST00000348225 PTPRJQ12913 1337 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 A0A1B0GUA9 196 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 KIF5CO60282 957 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 GFPT2O94808 682 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 RPLP2P05387 115 aaKnown RBP20.16■□□□□ 0.82
PTN-201ENST00000348225 ASGR1P07306 291 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 CLTAP09496 248 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 ZNF200P98182 395 aaPredicted RBP20.16■□□□□ 0.82
PTN-201ENST00000348225 ENOX2Q16206 610 aaKnown RBP20.16■□□□□ 0.82
PTN-201ENST00000348225 DCAF4L1Q3SXM0 396 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 WDR44Q5JSH3 913 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 ENOSF1Q7L5Y1 443 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 CATSPER4Q7RTX7 472 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 CDR2LQ86X02 465 aaPredicted RBP20.16■□□□□ 0.82
PTN-201ENST00000348225 KIF18AQ8NI77 898 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 ZNF592Q92610 1267 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 FAM212AQ96EL1 285 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 TSGA10Q9BZW7 698 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 GPR88Q9GZN0 384 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 PAXBP1Q9Y5B6 917 aa20.16■□□□□ 0.82
PTN-201ENST00000348225 RBAK-RBAKDNI3L0D1 243 aa20.15■□□□□ 0.82
PTN-201ENST00000348225 EVI5O60447 810 aa20.15■□□□□ 0.82
PTN-201ENST00000348225 PHACTR2O75167 634 aa20.15■□□□□ 0.82
PTN-201ENST00000348225 HLA-DRAP01903 254 aa20.15■□□□□ 0.82
PTN-201ENST00000348225 MYCNP04198 464 aaPredicted RBP20.15■□□□□ 0.82
PTN-201ENST00000348225 EIF4BP23588 611 aaKnown RBP20.15■□□□□ 0.82
PTN-201ENST00000348225 VAV2P52735 878 aa20.15■□□□□ 0.82
PTN-201ENST00000348225 KCNA10Q16322 511 aa20.15■□□□□ 0.82
PTN-201ENST00000348225 SLC18A3Q16572 532 aa20.15■□□□□ 0.82
PTN-201ENST00000348225 RSPH3Q86UC2 560 aa20.15■□□□□ 0.82
PTN-201ENST00000348225 JAKMIP2Q96AA8 810 aa20.15■□□□□ 0.82
PTN-201ENST00000348225 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.15■□□□□ 0.82
PTN-201ENST00000348225 IFIH1Q9BYX4 1025 aaKnown RBP20.15■□□□□ 0.82
PTN-201ENST00000348225 KRT86O43790 486 aa20.14■□□□□ 0.81
PTN-201ENST00000348225 B4GALT4O60513 344 aa20.14■□□□□ 0.81
PTN-201ENST00000348225 STAG3L1P0CL83 205 aa20.14■□□□□ 0.81
PTN-201ENST00000348225 AXLP30530 894 aa20.14■□□□□ 0.81
PTN-201ENST00000348225 CRYBB1P53674 252 aaPredicted RBP20.14■□□□□ 0.81
PTN-201ENST00000348225 OSTNP61366 133 aa20.14■□□□□ 0.81
PTN-201ENST00000348225 CYP27A1Q02318 531 aa20.14■□□□□ 0.81
PTN-201ENST00000348225 PTK2Q05397 1052 aa20.14■□□□□ 0.81
PTN-201ENST00000348225 DUOXA2Q1HG44 320 aa20.14■□□□□ 0.81
PTN-201ENST00000348225 FAM47CQ5HY64 1035 aa20.14■□□□□ 0.81
PTN-201ENST00000348225 CCSAPQ6IQ19 270 aaPredicted RBP20.14■□□□□ 0.81
PTN-201ENST00000348225 SYT10Q6XYQ8 523 aa20.14■□□□□ 0.81
PTN-201ENST00000348225 SESTD1Q86VW0 696 aa20.14■□□□□ 0.81
PTN-201ENST00000348225 CEP120Q8N960 986 aa20.14■□□□□ 0.81
PTN-201ENST00000348225 PCDHA13Q9Y5I0 950 aa20.14■□□□□ 0.81
PTN-201ENST00000348225 M0QZ92 97 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 ZNF263O14978 683 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 LRRN2O75325 713 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 CABYRO75952 493 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 INHAP05111 366 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 ARHGAP25P42331 645 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 GNG11P61952 73 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 GCNT1Q02742 428 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 GFPT1Q06210 699 aaPredicted RBP20.13■□□□□ 0.81
PTN-201ENST00000348225 KIF5AQ12840 1032 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 NOTUMQ6P988 496 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 ZNF571Q7Z3V5 609 aaPredicted RBP20.13■□□□□ 0.81
PTN-201ENST00000348225 OR5B17Q8NGF7 314 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 HELQQ8TDG4 1101 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms