RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 RIMBP3CA6NJZ7 1639 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 RIMBP3BA6NNM3 1639 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 RNF17Q9BXT8 1623 aaKnown RBP12.45□□□□□ -0.42
TRAF3-201ENST00000347662 RIMBP3Q9UFD9 1639 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 IKBKBO14920 756 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 FTCDO95954 541 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 CUL3Q13618 768 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 OOSP2Q86WS3 158 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 CDR2LQ86X02 465 aaPredicted RBP12.45□□□□□ -0.42
TRAF3-201ENST00000347662 CHSY1Q86X52 802 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 PITPNM3Q9BZ71 974 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 ZMYND12Q9H0C1 365 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 GJB4Q9NTQ9 266 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 EPN1Q9Y6I3 576 aaPredicted RBP12.45□□□□□ -0.42
TRAF3-201ENST00000347662 MROH7-TTC4A0A0A0MT08 1334 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 GCFC2P16383 781 aaKnown RBP12.45□□□□□ -0.42
TRAF3-201ENST00000347662 THNSL1Q8IYQ7 743 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 FANCLQ9NW38 375 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 NSMCE4AQ9NXX6 385 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 ABCB11O95342 1321 aa12.45□□□□□ -0.42
TRAF3-201ENST00000347662 ALKBH2Q6NS38 261 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 STAG2Q8N3U4 1231 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 TMEM47Q9BQJ4 181 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 OLFML3Q9NRN5 406 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 GGA3Q9NZ52 723 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 TJP2Q9UDY2 1190 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 CDC42BPBQ9Y5S2 1711 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 UBE4BO95155 1302 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 HUS1O60921 280 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 PMS2P54278 862 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 NUGGCQ68CJ6 796 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 ZNF614Q8N883 585 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 TUBGCP3Q96CW5 907 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 HACL1Q9UJ83 578 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 ZFP69BQ9UJL9 534 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 PCDHB8Q9UN66 801 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 DEAF1O75398 565 aaPredicted RBP12.44□□□□□ -0.42
TRAF3-201ENST00000347662 CMA1P23946 247 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 NT5DC4Q86YG4 428 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 EFHBQ8N7U6 833 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 FAM84BQ96KN1 310 aaPredicted RBP12.44□□□□□ -0.42
TRAF3-201ENST00000347662 EIF2S1P05198 315 aaKnown RBP12.44□□□□□ -0.42
TRAF3-201ENST00000347662 DPEP1P16444 411 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 EIF2B5Q13144 721 aaKnown RBP12.44□□□□□ -0.42
TRAF3-201ENST00000347662 SPARCL1Q14515 664 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 MFSD14CQ5VZR4 134 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 ARL8AQ96BM9 186 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRAF3-201ENST00000347662 UTYO14607 1347 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 ARF5P84085 180 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 MTMR2Q13614 643 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 LAMC2Q13753 1193 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 SIRT2Q8IXJ6 389 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 TBC1D16Q8TBP0 767 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 BHMT2Q9H2M3 363 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 PNMA8BQ9ULN7 279 aaPredicted RBP12.44□□□□□ -0.42
TRAF3-201ENST00000347662 ADGRA2Q96PE1 1338 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 ZNF235Q14590 738 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 IRAK1BP1Q5VVH5 260 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 NSUN7Q8NE18 718 aaKnown RBP12.44□□□□□ -0.42
TRAF3-201ENST00000347662 FMO2Q99518 471 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 PCDHA6Q9UN73 950 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 PCDHA8Q9Y5H6 950 aa12.44□□□□□ -0.42
TRAF3-201ENST00000347662 YIPF3Q9GZM5 350 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 DCP1AQ9NPI6 582 aaPredicted RBP12.43□□□□□ -0.42
TRAF3-201ENST00000347662 BIRC5O15392 142 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 KRT37O76014 449 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 RHOBTB1O94844 696 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 SPATA1Q5VX52 437 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 TBC1D1Q86TI0 1168 aaPredicted RBP12.43□□□□□ -0.42
TRAF3-201ENST00000347662 JADE3Q92613 823 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 FAM162AQ96A26 154 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 ELAC2Q9BQ52 826 aaKnown RBP12.43□□□□□ -0.42
TRAF3-201ENST00000347662 DCTN4Q9UJW0 460 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 SSH2Q76I76 1423 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 ATP1A1P05023 1023 aaKnown RBP12.43□□□□□ -0.42
TRAF3-201ENST00000347662 GRIK1P39086 918 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 HUNKP57058 714 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 TP53BP2Q13625 1128 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 TOMM20Q15388 145 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 SURF1Q15526 300 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 HIBCHQ6NVY1 386 aaPredicted RBP12.43□□□□□ -0.42
TRAF3-201ENST00000347662 LEMD2Q8NC56 503 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 RIN3Q8TB24 985 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 KRT84Q9NSB2 600 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 PKD2L2Q9NZM6 624 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 MPP6Q9NZW5 540 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 PGRMC1O00264 195 aaKnown RBP12.43□□□□□ -0.42
TRAF3-201ENST00000347662 SKAP2O75563 359 aaPredicted RBP12.43□□□□□ -0.42
TRAF3-201ENST00000347662 FEN1P39748 380 aaKnown RBP12.43□□□□□ -0.42
TRAF3-201ENST00000347662 NCAPD2Q15021 1401 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 PTPN21Q16825 1174 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 ANO5Q75V66 913 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 SAMD7Q7Z3H4 446 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 TMEM206Q9H813 350 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 LINC00854A0A1B0GVQ3 168 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 PIK3R2O00459 728 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 NCKAP1LP55160 1127 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 DR1Q01658 176 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 APBA1Q02410 837 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms