RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 BLOC1S4Q9NUP1 217 aa21.96■■□□□ 1.11
CEACAM3-201ENST00000344550 STK17AQ9UEE5 414 aa21.96■■□□□ 1.11
CEACAM3-201ENST00000344550 CCDC39Q9UFE4 941 aa21.96■■□□□ 1.11
CEACAM3-201ENST00000344550 MTMR6Q9Y217 621 aa21.96■■□□□ 1.11
CEACAM3-201ENST00000344550 USP20Q9Y2K6 914 aa21.96■■□□□ 1.11
CEACAM3-201ENST00000344550 SFI1A8K8P3 1242 aa21.95■■□□□ 1.1
CEACAM3-201ENST00000344550 ABLIM1O14639 778 aa21.95■■□□□ 1.1
CEACAM3-201ENST00000344550 TRAPPC3O43617 180 aa21.95■■□□□ 1.1
CEACAM3-201ENST00000344550 STX6O43752 255 aa21.95■■□□□ 1.1
CEACAM3-201ENST00000344550 GLUD1P00367 558 aa21.95■■□□□ 1.1
CEACAM3-201ENST00000344550 KCNE1P15382 129 aa21.95■■□□□ 1.1
CEACAM3-201ENST00000344550 PLCG1P19174 1290 aa21.95■■□□□ 1.1
CEACAM3-201ENST00000344550 COL9A1P20849 921 aa21.95■■□□□ 1.1
CEACAM3-201ENST00000344550 TXLNAP40222 546 aa21.95■■□□□ 1.1
CEACAM3-201ENST00000344550 GPR149Q86SP6 731 aa21.95■■□□□ 1.1
CEACAM3-201ENST00000344550 GPBP1Q86WP2 473 aa21.95■■□□□ 1.1
CEACAM3-201ENST00000344550 LARP4BQ92615 738 aaKnown RBP21.95■■□□□ 1.1
CEACAM3-201ENST00000344550 EDAQ92838 391 aa21.95■■□□□ 1.1
CEACAM3-201ENST00000344550 RPGRIP1Q96KN7 1286 aa21.95■■□□□ 1.1
CEACAM3-201ENST00000344550 TSPAN18Q96SJ8 248 aa21.95■■□□□ 1.1
CEACAM3-201ENST00000344550 TTPALQ9BTX7 342 aa21.95■■□□□ 1.1
CEACAM3-201ENST00000344550 SMIM28A0A1B0GU29 152 aa21.94■■□□□ 1.1
CEACAM3-201ENST00000344550 CLDN3O15551 220 aa21.94■■□□□ 1.1
CEACAM3-201ENST00000344550 RARS2Q5T160 578 aaKnown RBP21.94■■□□□ 1.1
CEACAM3-201ENST00000344550 PLCD3Q8N3E9 789 aa21.94■■□□□ 1.1
CEACAM3-201ENST00000344550 PIK3R5Q8WYR1 880 aa21.94■■□□□ 1.1
CEACAM3-201ENST00000344550 REEP2Q9BRK0 252 aa21.94■■□□□ 1.1
CEACAM3-201ENST00000344550 PLEKHA5Q9HAU0 1116 aa21.94■■□□□ 1.1
CEACAM3-201ENST00000344550 FBXO2Q9UK22 296 aaPredicted RBP21.94■■□□□ 1.1
CEACAM3-201ENST00000344550 CLIC4Q9Y696 253 aa21.94■■□□□ 1.1
CEACAM3-201ENST00000344550 CASTOR2A6NHX0 329 aa21.93■■□□□ 1.1
CEACAM3-201ENST00000344550 C2CD2LO14523 706 aa21.93■■□□□ 1.1
CEACAM3-201ENST00000344550 FAM13AO94988 1023 aa21.93■■□□□ 1.1
CEACAM3-201ENST00000344550 RPL9P32969 192 aaKnown RBP21.93■■□□□ 1.1
CEACAM3-201ENST00000344550 GRIN1Q05586 938 aa21.93■■□□□ 1.1
CEACAM3-201ENST00000344550 MCL1Q07820 350 aa21.93■■□□□ 1.1
CEACAM3-201ENST00000344550 RAD51AP2Q09MP3 1159 aa21.93■■□□□ 1.1
CEACAM3-201ENST00000344550 NOLC1Q14978 699 aaKnown RBP eCLIP21.93■■□□□ 1.1
CEACAM3-201ENST00000344550 SLC39A14Q15043 492 aa21.93■■□□□ 1.1
CEACAM3-201ENST00000344550 KARSQ15046 597 aaKnown RBP21.93■■□□□ 1.1
CEACAM3-201ENST00000344550 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.93■■□□□ 1.1
CEACAM3-201ENST00000344550 HAUS6Q7Z4H7 955 aa21.93■■□□□ 1.1
CEACAM3-201ENST00000344550 RIN2Q8WYP3 895 aaPredicted RBP21.93■■□□□ 1.1
CEACAM3-201ENST00000344550 CNTN3Q9P232 1028 aa21.93■■□□□ 1.1
CEACAM3-201ENST00000344550 MUTYHQ9UIF7 546 aa21.93■■□□□ 1.1
CEACAM3-201ENST00000344550 SPDYE4A6NLX3 237 aa21.92■■□□□ 1.1
CEACAM3-201ENST00000344550 F8W810 466 aa21.92■■□□□ 1.1
CEACAM3-201ENST00000344550 KIF4AO95239 1232 aa21.92■■□□□ 1.1
CEACAM3-201ENST00000344550 PIGRP01833 764 aa21.92■■□□□ 1.1
CEACAM3-201ENST00000344550 UPP1Q16831 310 aa21.92■■□□□ 1.1
CEACAM3-201ENST00000344550 LILRA6Q6PI73 481 aa21.92■■□□□ 1.1
CEACAM3-201ENST00000344550 RTL10Q7L3V2 364 aa21.92■■□□□ 1.1
CEACAM3-201ENST00000344550 BMP8AQ7Z5Y6 402 aa21.92■■□□□ 1.1
CEACAM3-201ENST00000344550 ZDHHC14Q8IZN3 488 aa21.92■■□□□ 1.1
CEACAM3-201ENST00000344550 SNX27Q96L92 541 aa21.92■■□□□ 1.1
CEACAM3-201ENST00000344550 PAAF1Q9BRP4 392 aa21.92■■□□□ 1.1
CEACAM3-201ENST00000344550 ST6GALNAC4Q9H4F1 302 aa21.92■■□□□ 1.1
CEACAM3-201ENST00000344550 POMKQ9H5K3 350 aa21.92■■□□□ 1.1
CEACAM3-201ENST00000344550 ZDHHC7Q9NXF8 308 aa21.92■■□□□ 1.1
CEACAM3-201ENST00000344550 MYH11P35749 1972 aa21.92■■□□□ 1.1
CEACAM3-201ENST00000344550 TRAK2O60296 914 aa21.91■■□□□ 1.1
CEACAM3-201ENST00000344550 TBCAO75347 108 aaKnown RBP21.91■■□□□ 1.1
CEACAM3-201ENST00000344550 B3GAT3O94766 335 aa21.91■■□□□ 1.1
CEACAM3-201ENST00000344550 KRT18P05783 430 aaKnown RBP21.91■■□□□ 1.1
CEACAM3-201ENST00000344550 NASPP49321 788 aaPredicted RBP21.91■■□□□ 1.1
CEACAM3-201ENST00000344550 MCM6Q14566 821 aa21.91■■□□□ 1.1
CEACAM3-201ENST00000344550 FAM171A1Q5VUB5 890 aa21.91■■□□□ 1.1
CEACAM3-201ENST00000344550 CCDC73Q6ZRK6 1079 aa21.91■■□□□ 1.1
CEACAM3-201ENST00000344550 MYCT1Q8N699 235 aa21.91■■□□□ 1.1
CEACAM3-201ENST00000344550 KRI1Q8N9T8 703 aaKnown RBP21.91■■□□□ 1.1
CEACAM3-201ENST00000344550 APOL5Q9BWW9 433 aa21.91■■□□□ 1.1
CEACAM3-201ENST00000344550 MAN1C1Q9NR34 630 aa21.91■■□□□ 1.1
CEACAM3-201ENST00000344550 TBX20Q9UMR3 447 aa21.91■■□□□ 1.1
CEACAM3-201ENST00000344550 HCN4Q9Y3Q4 1203 aa21.91■■□□□ 1.1
CEACAM3-201ENST00000344550 CLTAP09496 248 aa21.9■■□□□ 1.1
CEACAM3-201ENST00000344550 FGFR3P22607 806 aa21.9■■□□□ 1.1
CEACAM3-201ENST00000344550 TMC5Q6UXY8 1006 aa21.9■■□□□ 1.1
CEACAM3-201ENST00000344550 OTOP3Q7RTS5 596 aa21.9■■□□□ 1.1
CEACAM3-201ENST00000344550 HSCBQ8IWL3 235 aa21.9■■□□□ 1.1
CEACAM3-201ENST00000344550 C12orf76Q8N812 135 aaPredicted RBP21.9■■□□□ 1.1
CEACAM3-201ENST00000344550 CEP120Q8N960 986 aa21.9■■□□□ 1.1
CEACAM3-201ENST00000344550 ACSF2Q96CM8 615 aaPredicted RBP21.9■■□□□ 1.1
CEACAM3-201ENST00000344550 EPSTI1Q96J88 318 aa21.9■■□□□ 1.1
CEACAM3-201ENST00000344550 SEL1LQ9UBV2 794 aa21.9■■□□□ 1.1
CEACAM3-201ENST00000344550 NPHP3-ACAD11A0A0J9YXS1 232 aa21.89■■□□□ 1.09
CEACAM3-201ENST00000344550 MARCKSP29966 332 aaPredicted RBP21.89■■□□□ 1.09
CEACAM3-201ENST00000344550 ZXDAP98168 799 aa21.89■■□□□ 1.09
CEACAM3-201ENST00000344550 GTF2BQ00403 316 aa21.89■■□□□ 1.09
CEACAM3-201ENST00000344550 POU5F1Q01860 360 aaKnown RBP21.89■■□□□ 1.09
CEACAM3-201ENST00000344550 PTPN21Q16825 1174 aa21.89■■□□□ 1.09
CEACAM3-201ENST00000344550 RTP2Q5QGT7 225 aa21.89■■□□□ 1.09
CEACAM3-201ENST00000344550 RRAGBQ5VZM2 374 aa21.89■■□□□ 1.09
CEACAM3-201ENST00000344550 CCDC149Q6ZUS6 474 aa21.89■■□□□ 1.09
CEACAM3-201ENST00000344550 ZBTB33Q86T24 672 aa21.89■■□□□ 1.09
CEACAM3-201ENST00000344550 TDRD5Q8NAT2 981 aaKnown RBP21.89■■□□□ 1.09
CEACAM3-201ENST00000344550 LNX1Q8TBB1 728 aaPredicted RBP21.89■■□□□ 1.09
CEACAM3-201ENST00000344550 LRRC15Q8TF66 581 aa21.89■■□□□ 1.09
CEACAM3-201ENST00000344550 ZNF396Q96N95 335 aaPredicted RBP21.89■■□□□ 1.09
CEACAM3-201ENST00000344550 KCNH6Q9H252 994 aa21.89■■□□□ 1.09
CEACAM3-201ENST00000344550 CXCL16Q9H2A7 254 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms