RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 BMP10O95393 424 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 FNTAP49354 379 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 ITGA1P56199 1179 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 DMPKQ09013 629 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 ARMC4Q5T2S8 1044 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 CDKL3Q8IVW4 592 aaPredicted RBP18.52■□□□□ 0.56
SMAD4-201ENST00000342988 WNT8AQ9H1J5 351 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 NDUFA13Q9P0J0 144 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 BLMP54132 1417 aaPredicted RBP18.52■□□□□ 0.55
SMAD4-201ENST00000342988 A0A1W2PRG6 482 aa18.52■□□□□ 0.55
SMAD4-201ENST00000342988 CD58P19256 250 aa18.52■□□□□ 0.55
SMAD4-201ENST00000342988 ZNF699Q32M78 642 aa18.52■□□□□ 0.55
SMAD4-201ENST00000342988 SH3BP4Q9P0V3 963 aa18.52■□□□□ 0.55
SMAD4-201ENST00000342988 SMCO3A2RU48 225 aa18.52■□□□□ 0.55
SMAD4-201ENST00000342988 GUCY1B2O75343 617 aa18.52■□□□□ 0.55
SMAD4-201ENST00000342988 RALAP11233 206 aa18.52■□□□□ 0.55
SMAD4-201ENST00000342988 TRAP1Q12931 704 aaKnown RBP18.52■□□□□ 0.55
SMAD4-201ENST00000342988 STX5Q13190 355 aa18.52■□□□□ 0.55
SMAD4-201ENST00000342988 CCDC81Q6ZN84 652 aa18.52■□□□□ 0.55
SMAD4-201ENST00000342988 METTL22Q9BUU2 404 aaPredicted RBP18.52■□□□□ 0.55
SMAD4-201ENST00000342988 IP6K2Q9UHH9 426 aa18.52■□□□□ 0.55
SMAD4-201ENST00000342988 CDY2AQ9Y6F7 541 aa18.52■□□□□ 0.55
SMAD4-201ENST00000342988 CDY1Q9Y6F8 540 aa18.52■□□□□ 0.55
SMAD4-201ENST00000342988 SORBS3O60504 671 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 ALDH18A1P54886 795 aaKnown RBP18.51■□□□□ 0.55
SMAD4-201ENST00000342988 VEPH1Q14D04 833 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 NFIL3Q16649 462 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 SLITRK2Q9H156 845 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 TRIM39Q9HCM9 518 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 CCDC166P0CW27 439 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 FEN1P39748 380 aaKnown RBP18.51■□□□□ 0.55
SMAD4-201ENST00000342988 HSPBP1Q9NZL4 362 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 PKP3Q9Y446 797 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 SNX14Q9Y5W7 946 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 TERF2Q15554 542 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 ADCK2Q7Z695 626 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 STN1Q9H668 368 aaKnown RBP18.51■□□□□ 0.55
SMAD4-201ENST00000342988 PPP6R2O75170 966 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 ABCB5Q2M3G0 1257 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 NDUFA10O95299 355 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 TSNQ15631 228 aaKnown RBP18.51■□□□□ 0.55
SMAD4-201ENST00000342988 VPS9D1Q9Y2B5 631 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 NDUFA8P51970 172 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 KYAT1Q16773 422 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 SYDE1Q6ZW31 735 aaPredicted RBP18.51■□□□□ 0.55
SMAD4-201ENST00000342988 RASA1P20936 1047 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 ZNF667Q5HYK9 610 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 UGT3A1Q6NUS8 523 aa18.51■□□□□ 0.55
SMAD4-201ENST00000342988 AGGF1Q8N302 714 aaeCLIP18.51■□□□□ 0.55
SMAD4-201ENST00000342988 FLT4P35916 1363 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 DENND3A2RUS2 1198 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 A8MXQ7 604 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 HPGDP15428 266 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 YWHAQP27348 245 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 ZBED6P86452 979 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 P3H1Q32P28 736 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 IZUMO1Q8IYV9 350 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 SNX31Q8N9S9 440 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 OSBPL9Q96SU4 736 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 MSTO1Q9BUK6 570 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 TMCC3Q9ULS5 477 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.5■□□□□ 0.553e-7■□□□□ 10.7
SMAD4-201ENST00000342988 APOL1O14791 398 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 ENO1P06733 434 aaKnown RBP18.5■□□□□ 0.55
SMAD4-201ENST00000342988 KIAA0408Q6ZU52 694 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 RGS18Q9NS28 235 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 PDP2Q9P2J9 529 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 PDE5AO76074 875 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 CYBBP04839 570 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 STAT5AP42229 794 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 PLA2G4AP47712 749 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 STAT5BP51692 787 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 DHX34Q14147 1143 aaKnown RBP18.5■□□□□ 0.55
SMAD4-201ENST00000342988 TM6SF1Q9BZW5 370 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 MEI4A8MW99 385 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 GTF2E2P29084 291 aaKnown RBP18.5■□□□□ 0.55
SMAD4-201ENST00000342988 ECSITQ9BQ95 431 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 RPS6KB2Q9UBS0 482 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 MYL2P10916 166 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 PRIM2P49643 509 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 CLCC1Q96S66 551 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 FTCDO95954 541 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 LGALS3BPQ08380 585 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 CLEC16AQ2KHT3 1053 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 PPM1NQ8N819 430 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 OR6B3Q8NGW1 331 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 ENKURQ8TC29 256 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 CSPG5O95196 566 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 PADI6Q6TGC4 694 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 RFT1Q96AA3 541 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 RIC8BQ9NVN3 520 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 COQ6Q9Y2Z9 468 aa18.5■□□□□ 0.55
SMAD4-201ENST00000342988 CCND1P24385 295 aa18.49■□□□□ 0.55
SMAD4-201ENST00000342988 COPRSQ9NQ92 184 aa18.49■□□□□ 0.55
SMAD4-201ENST00000342988 HERC5Q9UII4 1024 aaKnown RBP18.49■□□□□ 0.55
SMAD4-201ENST00000342988 CCT3P49368 545 aaKnown RBP18.49■□□□□ 0.55
SMAD4-201ENST00000342988 TRIM32Q13049 653 aa18.49■□□□□ 0.55
SMAD4-201ENST00000342988 THOC1Q96FV9 657 aaKnown RBP18.49■□□□□ 0.55
SMAD4-201ENST00000342988 PRG4Q92954 1404 aaPredicted RBP18.49■□□□□ 0.55
SMAD4-201ENST00000342988 C20orf96Q9NUD7 363 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms