RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 LIN52Q52LA3 116 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 PLEKHG4Q58EX7 1191 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 SEL1L2Q5TEA6 688 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 SPATA31D4Q6ZUB0 917 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 NLRP9Q7RTR0 991 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 PRUNE1Q86TP1 453 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 LCA5Q86VQ0 697 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 DTX3LQ8TDB6 740 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 BTBD10Q9BSF8 475 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 ASCC2Q9H1I8 757 aaPredicted RBP10.02□□□□□ -0.81
NECAP1-201ENST00000339754 SYNCQ9H7C4 482 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 STK32BQ9NY57 414 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 KANSL3Q9P2N6 904 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 ZNF212Q9UDV6 495 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 DNAJC12Q9UKB3 198 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 MTUS1Q9ULD2 1270 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 ROBO3Q96MS0 1386 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 TMEM110-MUSTN1A8MSY1 372 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 PDXKO00764 312 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 MAP3K7O43318 606 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 THAP12O43422 761 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 CCDC22O60826 627 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 FGFR1P11362 822 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 NEK3P51956 506 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 KCNQ4P56696 695 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 KRT17Q04695 432 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 ZRSR2Q15696 482 aaKnown RBP10.02□□□□□ -0.81
NECAP1-201ENST00000339754 C1QTNF12Q5T7M4 302 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 C10orf71Q711Q0 1435 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 OTOAQ7RTW8 1153 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 CPNE8Q86YQ8 564 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 PPFIBP2Q8ND30 876 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 PTCD3Q96EY7 689 aaKnown RBP10.02□□□□□ -0.81
NECAP1-201ENST00000339754 TUBGCP5Q96RT8 1024 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 CCDC28BQ9BUN5 200 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 BLOC1S6Q9UL45 172 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 NIP7Q9Y221 180 aaKnown RBP eCLIP10.02□□□□□ -0.81
NECAP1-201ENST00000339754 COMMD3-BMI1R4GMX3 469 aa10.02□□□□□ -0.81
NECAP1-201ENST00000339754 TULP1O00294 542 aaPredicted RBP10.01□□□□□ -0.81
NECAP1-201ENST00000339754 EXOC3O60645 756 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 TPP2P29144 1249 aaPredicted RBP10.01□□□□□ -0.81
NECAP1-201ENST00000339754 ITGA8P53708 1063 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 SLC18A1P54219 525 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 USP17L2Q6R6M4 530 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 TRABD2AQ86V40 505 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 FAM84BQ96KN1 310 aaPredicted RBP10.01□□□□□ -0.81
NECAP1-201ENST00000339754 MXD3Q9BW11 206 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 WNT8AQ9H1J5 351 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 MMADHCQ9H3L0 296 aaPredicted RBP10.01□□□□□ -0.81
NECAP1-201ENST00000339754 ZHX3Q9H4I2 956 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 ARL8BQ9NVJ2 186 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 STX8Q9UNK0 236 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 FRMPD4Q14CM0 1322 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 SLC16A3O15427 465 aaKnown RBP10.01□□□□□ -0.81
NECAP1-201ENST00000339754 PRPF4O43172 522 aaKnown RBP eCLIP10.01□□□□□ -0.81
NECAP1-201ENST00000339754 CALUO43852 315 aaPredicted RBP10.01□□□□□ -0.81
NECAP1-201ENST00000339754 NR3C1P04150 777 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 TSPY3P0CV98 308 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 TSPY8P0CW00 308 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 SETSIPP0DME0 302 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 GCAP28676 217 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 SLC12A3P55017 1021 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 SPARCL1Q14515 664 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 MESDQ14696 234 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 STAT4Q14765 748 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 RNF207Q6ZRF8 634 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 HS2ST1Q7LGA3 356 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 STKLD1Q8NE28 680 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 C1orf54Q8WWF1 131 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 MKNK2Q9HBH9 465 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 LARSQ9P2J5 1176 aaKnown RBP10.01□□□□□ -0.81
NECAP1-201ENST00000339754 HSFX1Q9UBD0 423 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 PCDHA12Q9UN75 941 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 WASF2Q9Y6W5 498 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 COL4A1P02462 1669 aa10.01□□□□□ -0.81
NECAP1-201ENST00000339754 POTEB3A0JP26 581 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 POTECB2RU33 542 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 FTLP02792 175 aaPredicted RBP10□□□□□ -0.81
NECAP1-201ENST00000339754 SMARCA1P28370 1054 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 NT5C2P49902 561 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 SLC1A5Q15758 541 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 POTEBQ6S5H4 581 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 PTF1AQ7RTS3 328 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 ZNF526Q8TF50 670 aaPredicted RBP10□□□□□ -0.81
NECAP1-201ENST00000339754 SNF8Q96H20 258 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 UBN1Q9NPG3 1134 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 ASIC3Q9UHC3 531 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 CHORDC1Q9UHD1 332 aaPredicted RBP10□□□□□ -0.81
NECAP1-201ENST00000339754 ZNF510Q9Y2H8 683 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 ASTN1O14525 1302 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 A0A1W2PRG0 241 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 FSCN2O14926 492 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 ZWINTO95229 277 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 ETS2P15036 469 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 RPA3P35244 121 aaPredicted RBP10□□□□□ -0.81
NECAP1-201ENST00000339754 CCNFP41002 786 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 CDK7P50613 346 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 USP46P62068 366 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 KIF22Q14807 665 aa10□□□□□ -0.81
NECAP1-201ENST00000339754 TMED2Q15363 201 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms