RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 NUP58Q9BVL2 599 aa13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 LSM14BQ9BX40 385 aaKnown RBP13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 NXF3Q9H4D5 531 aaKnown RBP13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 RPF1Q9H9Y2 349 aaKnown RBP13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 PLCB1Q9NQ66 1216 aa13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 PADI3Q9ULW8 664 aa13.09□□□□□ -0.31
TRIM49B-201ENST00000332682 TTC26A0AVF1 554 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 RNF225M0QZC1 329 aaPredicted RBP13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 TULP1O00294 542 aaPredicted RBP13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 PITPNM1O00562 1244 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 TLR3O15455 904 aaKnown RBP13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 MFAP3LO75121 409 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 NOL4O94818 638 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 IL18RAPO95256 599 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 ACTN1P12814 892 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 SELPP16109 830 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 TNNI1P19237 187 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 CASP14P31944 242 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 APBA1Q02410 837 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 BFSP2Q13515 415 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 SURF1Q15526 300 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 ZACNQ401N2 412 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 TWF2Q6IBS0 349 aaKnown RBP13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 SV2AQ7L0J3 742 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 LRRC8DQ7L1W4 858 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 WDR49Q8IV35 697 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 TC2NQ8N9U0 490 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 CCDC150Q8NCX0 1101 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 OR5B17Q8NGF7 314 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 LMO3Q8TAP4 145 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 CACTINQ8WUQ7 758 aaKnown RBP13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 CPLX3Q8WVH0 158 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 IQCDQ96DY2 449 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 PAWRQ96IZ0 340 aaKnown RBP13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 TMEM106CQ9BVX2 250 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 CCDC94Q9BW85 323 aaPredicted RBP13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 TRIM6Q9C030 488 aaPredicted RBP13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 GANQ9H2C0 597 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 TMX1Q9H3N1 280 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 C11orf49Q9H6J7 331 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 SIX2Q9NPC8 291 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 CHST12Q9NRB3 414 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 COQ4Q9Y3A0 265 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 HES2Q9Y543 173 aa13.08□□□□□ -0.31
TRIM49B-201ENST00000332682 TRIP11Q15643 1979 aa13.08□□□□□ -0.32
TRIM49B-201ENST00000332682 A0A1W2PQJ5 194 aa13.08□□□□□ -0.32
TRIM49B-201ENST00000332682 AKR1B15C9JRZ8 316 aaPredicted RBP13.08□□□□□ -0.32
TRIM49B-201ENST00000332682 TPM1P09493 284 aa13.08□□□□□ -0.32
TRIM49B-201ENST00000332682 CAPN2P17655 700 aa13.08□□□□□ -0.32
TRIM49B-201ENST00000332682 ADKP55263 362 aaKnown RBP13.08□□□□□ -0.32
TRIM49B-201ENST00000332682 TLE2Q04725 743 aa13.08□□□□□ -0.32
TRIM49B-201ENST00000332682 FAAP100Q0VG06 881 aa13.08□□□□□ -0.32
TRIM49B-201ENST00000332682 CETN1Q12798 172 aa13.08□□□□□ -0.32
TRIM49B-201ENST00000332682 PDCD11Q14690 1871 aaKnown RBP13.08□□□□□ -0.32
TRIM49B-201ENST00000332682 SLC10A6Q3KNW5 377 aa13.08□□□□□ -0.32
TRIM49B-201ENST00000332682 TDRD10Q5VZ19 366 aaKnown RBP13.08□□□□□ -0.32
TRIM49B-201ENST00000332682 EFCAB13Q8IY85 973 aa13.08□□□□□ -0.32
TRIM49B-201ENST00000332682 NEK11Q8NG66 645 aa13.08□□□□□ -0.32
TRIM49B-201ENST00000332682 TAS1R2Q8TE23 839 aa13.08□□□□□ -0.32
TRIM49B-201ENST00000332682 FAM212AQ96EL1 285 aa13.08□□□□□ -0.32
TRIM49B-201ENST00000332682 ACAP3Q96P50 834 aa13.08□□□□□ -0.32
TRIM49B-201ENST00000332682 INTS2Q9H0H0 1204 aaKnown RBP13.08□□□□□ -0.32
TRIM49B-201ENST00000332682 CAPN11Q9UMQ6 739 aa13.08□□□□□ -0.32
TRIM49B-201ENST00000332682 UMODL1Q5DID0 1318 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 LACTBL1A8MY62 500 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 DCDC2CA8MYV0 355 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 MGEA5O60502 916 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 LRRN2O75325 713 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 C4BPAP04003 597 aaKnown RBP13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 NFICP08651 508 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 AP3M2P53677 418 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 DSC3Q14574 896 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 HS1BP3Q53T59 392 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 KLHDC7AQ5VTJ3 777 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 CNGA4Q8IV77 575 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 LRRC8AQ8IWT6 810 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 SMG8Q8ND04 991 aaKnown RBP13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 FBXL13Q8NEE6 735 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 SEMA4DQ92854 862 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 TRIM44Q96DX7 344 aaPredicted RBP13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 SNX27Q96L92 541 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 MTMR12Q9C0I1 747 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 KCNF1Q9H3M0 494 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 ASB7Q9H672 318 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 SNTG2Q9NY99 539 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 CEP72Q9P209 647 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 IPPQ9Y573 584 aa13.07□□□□□ -0.32
TRIM49B-201ENST00000332682 NBNO60934 754 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 RECQL4O94761 1208 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 UCHL3P15374 230 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 KRT9P35527 623 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 ZBED6P86452 979 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 LRMPQ12912 555 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 GPNMBQ14956 572 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 JADE1Q6IE81 842 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 EHBP1Q8NDI1 1231 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 BAP1Q92560 729 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 ZNF830Q96NB3 372 aaPredicted RBP13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 TRAIPQ9BWF2 469 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 IFIH1Q9BYX4 1025 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms