RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 CLTBP09497 229 aa11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 ZSCAN20P17040 1043 aaPredicted RBP11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 RAB27AP51159 221 aa11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 KCNMA1Q12791 1236 aa11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 EXOC3L4Q17RC7 722 aa11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 CD302Q8IX05 232 aa11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 IQCDQ96DY2 449 aa11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 SNX27Q96L92 541 aa11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 POP1Q99575 1024 aaKnown RBP11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 IFIH1Q9BYX4 1025 aaKnown RBP11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 ASB7Q9H672 318 aa11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 GCNT4Q9P109 453 aa11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 UMODL1Q5DID0 1318 aa11.1□□□□□ -0.63
VIPAS39-201ENST00000327028 TTC26A0AVF1 554 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 PARNO95453 639 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 TNNI1P19237 187 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 KLK7P49862 253 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 CETN1Q12798 172 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 EPC2Q52LR7 807 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 KRT39Q6A163 491 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 C15orf39Q6ZRI6 1047 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 SMG8Q8ND04 991 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 FAM212AQ96EL1 285 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 PCMTD1Q96MG8 357 aaPredicted RBP11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 CRACR2AQ9BSW2 395 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 NUP58Q9BVL2 599 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 LSM14BQ9BX40 385 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 PLEKHA5Q9HAU0 1116 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 SNTG2Q9NY99 539 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 IPPQ9Y573 584 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 MGEA5O60502 916 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 NBNO60934 754 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 EN2P19622 333 aaPredicted RBP11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 YARSP54577 528 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 SLC10A6Q3KNW5 377 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 FIGNQ5HY92 759 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 LMBRD2Q68DH5 695 aaPredicted RBP11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 ZNF516Q92618 1163 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 INTS2Q9H0H0 1204 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 WNT8AQ9H1J5 351 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 PLCB1Q9NQ66 1216 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 FAM105AQ9NUU6 356 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 COQ4Q9Y3A0 265 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 PCDHB2Q9Y5E7 798 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 SCN5AQ14524 2016 aa11.09□□□□□ -0.63
VIPAS39-201ENST00000327028 LACTBL1A8MY62 500 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 RECQL4O94761 1208 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 GYPCP04921 128 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 PTMAP06454 111 aaKnown RBP11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 PON1P27169 355 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 GSDMDP57764 484 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 GPNMBQ14956 572 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 ZACNQ401N2 412 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 SV2AQ7L0J3 742 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 PPFIBP1Q86W92 1011 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 EFCAB13Q8IY85 973 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 HACE1Q8IYU2 909 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 FTHL17Q9BXU8 183 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 PPP1R12CQ9BZL4 782 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 TTYH3Q9C0H2 523 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 TMEM39AQ9NV64 488 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 HES2Q9Y543 173 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 ALPK3Q96L96 1907 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 RBAK-RBAKDNI3L0D1 243 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 TULP1O00294 542 aaPredicted RBP11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 CXCL10P02778 98 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 C4BPAP04003 597 aaKnown RBP11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 PLEKHG4Q58EX7 1191 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 TDRD10Q5VZ19 366 aaKnown RBP11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 DPY19L2P1Q6NXN4 242 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 MRPL10Q7Z7H8 261 aaKnown RBP11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 NT5DC4Q86YG4 428 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 NEK11Q8NG66 645 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 OR5B17Q8NGF7 314 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 SEPT8Q92599 483 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 APBB2Q92870 758 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 TSPAN18Q96SJ8 248 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 ADAM2Q99965 735 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 FAM207AQ9NSI2 230 aaPredicted RBP11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 CNTN3Q9P232 1028 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 DERAQ9Y315 318 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 C2CD2Q9Y426 696 aa11.08□□□□□ -0.64
VIPAS39-201ENST00000327028 A0A1W2PQJ5 194 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 ZNF623O75123 536 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 NFICP08651 508 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 TPM1P09493 284 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 TMEM191BP0C7N4 346 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 SKIP12755 728 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 TRIM21P19474 475 aaKnown RBP11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 DUOXA2Q1HG44 320 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 JADE1Q6IE81 842 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 TRIM65Q6PJ69 517 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 ALKAL1Q6UXT8 129 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 CCDC150Q8NCX0 1101 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 EHBP1Q8NDI1 1231 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 FBXL13Q8NEE6 735 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 LMO3Q8TAP4 145 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 ANKRD36BP1Q96IX9 119 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 FAM84AQ96KN4 292 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 APOL6Q9BWW8 343 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms