RNA–Protein interactions for RNA: ENST00000324501.9

PSEN1-201, Transcript of presenilin 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PSEN1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-201ENST00000324501 IGSF9BQ9UPX0 1349 aa7.72□□□□□ -1.17
PSEN1-201ENST00000324501 DPYSL4O14531 572 aa7.72□□□□□ -1.17
PSEN1-201ENST00000324501 EVI5O60447 810 aa7.72□□□□□ -1.17
PSEN1-201ENST00000324501 GIT2Q14161 759 aa7.72□□□□□ -1.17
PSEN1-201ENST00000324501 RPS6KA2Q15349 733 aa7.72□□□□□ -1.17
PSEN1-201ENST00000324501 PCSK9Q8NBP7 692 aaKnown RBP7.72□□□□□ -1.17
PSEN1-201ENST00000324501 SOCS4Q8WXH5 440 aa7.72□□□□□ -1.17
PSEN1-201ENST00000324501 L3MBTL3Q96JM7 780 aaPredicted RBP7.72□□□□□ -1.17
PSEN1-201ENST00000324501 ROBO1Q9Y6N7 1651 aa7.71□□□□□ -1.17
PSEN1-201ENST00000324501 AFDNP55196 1824 aaKnown RBP7.71□□□□□ -1.17
PSEN1-201ENST00000324501 CCDC160A6NGH7 325 aa7.71□□□□□ -1.17
PSEN1-201ENST00000324501 MAGEB2O15479 319 aa7.71□□□□□ -1.17
PSEN1-201ENST00000324501 S100BP04271 92 aaPredicted RBP7.71□□□□□ -1.17
PSEN1-201ENST00000324501 TROVE2P10155 538 aaKnown RBP eCLIP7.71□□□□□ -1.17
PSEN1-201ENST00000324501 GTF2H1P32780 548 aa7.71□□□□□ -1.17
PSEN1-201ENST00000324501 SLMAPQ14BN4 828 aa7.71□□□□□ -1.17
PSEN1-201ENST00000324501 C2CD6Q53TS8 623 aa7.71□□□□□ -1.17
PSEN1-201ENST00000324501 PYROXD1Q8WU10 500 aa7.71□□□□□ -1.17
PSEN1-201ENST00000324501 THOC1Q96FV9 657 aaKnown RBP7.71□□□□□ -1.17
PSEN1-201ENST00000324501 DDX47Q9H0S4 455 aaKnown RBP7.71□□□□□ -1.17
PSEN1-201ENST00000324501 RNF19AQ9NV58 838 aa7.71□□□□□ -1.17
PSEN1-201ENST00000324501 MOSPD1Q9UJG1 213 aa7.71□□□□□ -1.17
PSEN1-201ENST00000324501 FAN1Q9Y2M0 1017 aa7.71□□□□□ -1.17
PSEN1-201ENST00000324501 CXCL11O14625 94 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 CYTH3O43739 400 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 TOM1L1O75674 476 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 SCP2P22307 547 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 CLCN6P51797 869 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 GYS2P54840 703 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 XRRA1Q6P2D8 792 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 GPATCH11Q8N954 259 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 LRRC8CQ8TDW0 803 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 BTBD6Q96KE9 485 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 WDR24Q96S15 920 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 FMO2Q99518 471 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 KIAA1683Q9H0B3 1180 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 GPRC5DQ9NZD1 345 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 TUBE1Q9UJT0 475 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 EXOC1LA0A1B0GW35 172 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 EIF3DO15371 548 aaKnown RBP eCLIP7.71□□□□□ -1.18
PSEN1-201ENST00000324501 RNF40O75150 1001 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 RTN2O75298 545 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 PTPRAP18433 802 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 COL9A3Q14050 684 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-201ENST00000324501 NAA30Q147X3 362 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-201ENST00000324501 IFT43Q96FT9 208 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 FSD1LQ9BXM9 530 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 MTMR12Q9C0I1 747 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 TMEM117Q9H0C3 514 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 GOLPH3Q9H4A6 298 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 AGPAT3Q9NRZ7 376 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 G3BP2Q9UN86 482 aaKnown RBP7.71□□□□□ -1.18
PSEN1-201ENST00000324501 NOVA2Q9UNW9 492 aaKnown RBP7.71□□□□□ -1.18
PSEN1-201ENST00000324501 SLC8A2Q9UPR5 921 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 FAM50BQ9Y247 325 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 ZNF541Q9H0D2 1346 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 ADAMTSL3P82987 1691 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 A0A1W2PQC6 194 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 SOCS7O14512 581 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 ABCC6O95255 1503 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 PLEKP08567 350 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-201ENST00000324501 CDH6P55285 790 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 NSUN2Q08J23 767 aaKnown RBP eCLIP7.71□□□□□ -1.18
PSEN1-201ENST00000324501 ANKRD20A3Q5VUR7 823 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 RNF219Q5W0B1 726 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-201ENST00000324501 DNAAF5Q86Y56 855 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 CBWD2Q8IUF1 395 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 RBM41Q96IZ5 413 aaKnown RBP7.71□□□□□ -1.18
PSEN1-201ENST00000324501 STK33Q9BYT3 514 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 MROH8Q9H579 483 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 DPP3Q9NY33 737 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 KCND2Q9NZV8 630 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 PLAAQ9Y263 795 aa7.71□□□□□ -1.18
PSEN1-201ENST00000324501 PRG3Q9Y2Y8 225 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-201ENST00000324501 PFDN6O15212 129 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 MAFGO15525 162 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 KLRC1P26715 233 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 CASP2P42575 452 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 NPTX2P47972 431 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 AP3M2P53677 418 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 SGSM1Q2NKQ1 1148 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 MGAT5BQ3V5L5 792 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 DEFB128Q7Z7B8 93 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 ENGASEQ8NFI3 743 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 USP33Q8TEY7 942 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 PGBD4Q96DM1 585 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 CBWD1Q9BRT8 395 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 SPON2Q9BUD6 331 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 IDI2Q9BXS1 227 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 SEMA6BQ9H3T3 888 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 HOMER3Q9NSC5 361 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 ANKEF1Q9NU02 776 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 ANGPTL3Q9Y5C1 460 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 NRXN3Q9Y4C0 1643 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 PEX10O60683 326 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 ALDH5A1P51649 535 aaPredicted RBP7.7□□□□□ -1.18
PSEN1-201ENST00000324501 APLP1P51693 650 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 BEX3Q00994 111 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 GPS1Q13098 491 aa7.7□□□□□ -1.18
PSEN1-201ENST00000324501 SMTNL2Q2TAL5 461 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms