RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 ENTPD7Q9NQZ7 604 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 USP32Q8NFA0 1604 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 KPNA7A9QM74 516 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 TRPA1O75762 1119 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 ASMTLO95671 621 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 TRIM49P0CI25 452 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 TRIM49CP0CI26 452 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 NMT1P30419 496 aaKnown RBP9.49□□□□□ -0.89
CD28-201ENST00000324106 TMEM62Q0P6H9 643 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 CUL1Q13616 776 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 SNRNP35Q16560 246 aaKnown RBP9.49□□□□□ -0.89
CD28-201ENST00000324106 THEMIS2Q5TEJ8 643 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 ATG16L1Q676U5 607 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 GPT2Q8TD30 523 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 USP13Q92995 863 aaPredicted RBP9.49□□□□□ -0.89
CD28-201ENST00000324106 EPB41L5Q9HCM4 733 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 OLFML3Q9NRN5 406 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 FBXO28Q9NVF7 368 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 B3GAT3O94766 335 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 FAM200BP0CF97 657 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 LCP1P13796 627 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 PCK1P35558 622 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 SLC1A1P43005 524 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 CDH6P55285 790 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 WASHC5Q12768 1159 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 PDIA6Q15084 440 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 TMED2Q15363 201 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 TMC7Q7Z402 723 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 TXNRD3Q86VQ6 643 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 ELOA2Q8IYF1 753 aaPredicted RBP9.49□□□□□ -0.89
CD28-201ENST00000324106 CDC26Q8NHZ8 85 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 MRPL9Q9BYD2 267 aaKnown RBP9.49□□□□□ -0.89
CD28-201ENST00000324106 CATSPERBQ9H7T0 1116 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 GJB4Q9NTQ9 266 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 SPTLC3Q9NUV7 552 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 TMEM39AQ9NV64 488 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 E9PCH4 1651 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 DNAJC6O75061 913 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 MYO1DO94832 1006 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 ATXN8OSP0DMR3 200 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 ACOT2P49753 483 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 ATN1P54259 1190 aaPredicted RBP9.48□□□□□ -0.89
CD28-201ENST00000324106 METTL7BQ6UX53 244 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 ACER1Q8TDN7 264 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 WNT8AQ9H1J5 351 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 Q9H521 79 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 ATP8A1Q9Y2Q0 1164 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 SALL1Q9NSC2 1324 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 MTSS1O43312 755 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 FGGP02679 453 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 FTLP02792 175 aaPredicted RBP9.48□□□□□ -0.89
CD28-201ENST00000324106 SLC11A2P49281 568 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 YWHAHQ04917 246 aaPredicted RBP9.48□□□□□ -0.89
CD28-201ENST00000324106 NFIAQ12857 509 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 SLC12A1Q13621 1099 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 LRRC71Q8N4P6 559 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 NKX2-3Q8TAU0 364 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 CFAP36Q96G28 342 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 NIF3L1Q9GZT8 377 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 KIAA1257Q9ULG3 409 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 A0A1W2PQC6 194 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 OGTO15294 1046 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 EXTL3O43909 919 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 DHX9Q08211 1270 aaKnown RBP9.48□□□□□ -0.89
CD28-201ENST00000324106 LLGL1Q15334 1064 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 KIRREL3Q8IZU9 778 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 MYRIPQ8NFW9 859 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 GIPC2Q8TF65 315 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 CDCA5Q96FF9 252 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 GDAP1L1Q96MZ0 367 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 C7orf25Q9BPX7 421 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 NUP85Q9BW27 656 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 XPNPEP3Q9NQH7 507 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 PRDM10Q9NQV6 1147 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 NFU1Q9UMS0 254 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 SYNPO2Q9UMS6 1093 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 ORC6Q9Y5N6 252 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 MROH1Q8NDA8 1641 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 C3orf70A6NLC5 250 aaPredicted RBP9.48□□□□□ -0.89
CD28-201ENST00000324106 RNASEH1O60930 286 aaKnown RBP9.48□□□□□ -0.89
CD28-201ENST00000324106 NPTXRO95502 500 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 PDGFRAP16234 1089 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 GARTP22102 1010 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 DSG3P32926 999 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 CASP2P42575 452 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 RFX5P48382 616 aaPredicted RBP9.48□□□□□ -0.89
CD28-201ENST00000324106 OCRLQ01968 901 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 ROR1Q01973 937 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 CACNB2Q08289 660 aaPredicted RBP9.48□□□□□ -0.89
CD28-201ENST00000324106 KLHL38Q2WGJ6 581 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 GLE1Q53GS7 698 aaKnown RBP9.48□□□□□ -0.89
CD28-201ENST00000324106 ZNF280DQ6N043 979 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 PID1Q7Z2X4 250 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 KRT35Q92764 455 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 EGFL8Q99944 293 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 TUBB6Q9BUF5 446 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 PPP1R12CQ9BZL4 782 aa9.48□□□□□ -0.89
CD28-201ENST00000324106 ZNF609O15014 1411 aa9.47□□□□□ -0.89
CD28-201ENST00000324106 ANO9A1A5B4 782 aa9.47□□□□□ -0.89
CD28-201ENST00000324106 H3BRB1 525 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms