RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 SCP2P22307 547 aa18.64■□□□□ 0.57
COL9A1-201ENST00000320755 GPC3P51654 580 aa18.64■□□□□ 0.57
COL9A1-201ENST00000320755 CLUL1Q15846 466 aa18.64■□□□□ 0.57
COL9A1-201ENST00000320755 SNRNP48Q6IEG0 339 aaKnown RBP18.64■□□□□ 0.57
COL9A1-201ENST00000320755 ACAD10Q6JQN1 1059 aa18.64■□□□□ 0.57
COL9A1-201ENST00000320755 CCDC121Q6ZUS5 278 aa18.64■□□□□ 0.57
COL9A1-201ENST00000320755 GOLGA6L7A0A1B0GV03 622 aa18.64■□□□□ 0.57
COL9A1-201ENST00000320755 RRM1P23921 792 aa18.64■□□□□ 0.57
COL9A1-201ENST00000320755 CALCOCO2Q13137 446 aa18.64■□□□□ 0.57
COL9A1-201ENST00000320755 CIAPIN1Q6FI81 312 aa18.64■□□□□ 0.57
COL9A1-201ENST00000320755 SEC16BQ96JE7 1060 aa18.64■□□□□ 0.57
COL9A1-201ENST00000320755 ECEL1O95672 775 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 CDR1P51861 262 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 NBPF12Q5TAG4 269 aaPredicted RBP18.63■□□□□ 0.57
COL9A1-201ENST00000320755 CCDC50Q8IVM0 306 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 GPD1LQ8N335 351 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 DDX1Q92499 740 aaKnown RBP18.63■□□□□ 0.57
COL9A1-201ENST00000320755 DDX23Q9BUQ8 820 aaKnown RBP18.63■□□□□ 0.57
COL9A1-201ENST00000320755 TAOK3Q9H2K8 898 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 CHST7Q9NS84 486 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 PPP1R1BQ9UD71 204 aaPredicted RBP18.63■□□□□ 0.57
COL9A1-201ENST00000320755 MAPK13O15264 365 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 HARSP12081 509 aaKnown RBP18.63■□□□□ 0.57
COL9A1-201ENST00000320755 DRG2P55039 364 aaKnown RBP18.63■□□□□ 0.57
COL9A1-201ENST00000320755 BYSLQ13895 437 aaKnown RBP18.63■□□□□ 0.57
COL9A1-201ENST00000320755 SPATS2Q86XZ4 545 aaKnown RBP18.63■□□□□ 0.57
COL9A1-201ENST00000320755 TMEM143Q96AN5 459 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 TLCD1Q96CP7 247 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 TEPSINQ96N21 525 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 FNBP1Q96RU3 617 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 C1orf112Q9NSG2 853 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.63■□□□□ 0.57
COL9A1-201ENST00000320755 PASKQ96RG2 1323 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 FOXO6A8MYZ6 492 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 GRIN3BO60391 1043 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 CCND2P30279 289 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 VSIG10LQ86VR7 867 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 CCDC60Q8IWA6 550 aaPredicted RBP18.63■□□□□ 0.57
COL9A1-201ENST00000320755 JDP2Q8WYK2 163 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 ZNF516Q92618 1163 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 CCDC114Q96M63 670 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 XPO6Q96QU8 1125 aaKnown RBP18.63■□□□□ 0.57
COL9A1-201ENST00000320755 UVRAGQ9P2Y5 699 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 USTQ9Y2C2 406 aa18.63■□□□□ 0.57
COL9A1-201ENST00000320755 CPP00450 1065 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 CFHP08603 1231 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 KCNA3P22001 575 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 LIG4P49917 911 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 WNT7BP56706 349 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 KRT17Q04695 432 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 SIX1Q15475 284 aaPredicted RBP18.62■□□□□ 0.57
COL9A1-201ENST00000320755 LONRF1Q17RB8 773 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 SEZ6Q53EL9 994 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 CACNA2D3Q8IZS8 1091 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 ZBTB45Q96K62 511 aaPredicted RBP18.62■□□□□ 0.57
COL9A1-201ENST00000320755 MFSD14AQ96MC6 490 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 PWWP2AQ96N64 755 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 TIPINQ9BVW5 301 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 POLR3FQ9H1D9 316 aaPredicted RBP18.62■□□□□ 0.57
COL9A1-201ENST00000320755 COQ4Q9Y3A0 265 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 O00370 1275 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 NUDT17P0C025 328 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 HMGCS2P54868 508 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 CLEC16AQ2KHT3 1053 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 SPRED3Q2MJR0 410 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 ZFYVE27Q5T4F4 411 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 USP37Q86T82 979 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 MGARPQ8TDB4 240 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 IFT74Q96LB3 600 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 HERPUD2Q9BSE4 406 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 XPNPEP1Q9NQW7 623 aa18.62■□□□□ 0.57
COL9A1-201ENST00000320755 RASGRF2O14827 1237 aa18.61■□□□□ 0.57
COL9A1-201ENST00000320755 HNRNPH1P31943 449 aaKnown RBP18.61■□□□□ 0.57
COL9A1-201ENST00000320755 NF2P35240 595 aa18.61■□□□□ 0.57
COL9A1-201ENST00000320755 PRKCEQ02156 737 aa18.61■□□□□ 0.57
COL9A1-201ENST00000320755 TAX1BP1Q86VP1 789 aa18.61■□□□□ 0.57
COL9A1-201ENST00000320755 ATP6V0A1Q93050 837 aa18.61■□□□□ 0.57
COL9A1-201ENST00000320755 RIPK2O43353 540 aa18.61■□□□□ 0.57
COL9A1-201ENST00000320755 MTA2O94776 668 aa18.61■□□□□ 0.57
COL9A1-201ENST00000320755 GJB6O95452 261 aa18.61■□□□□ 0.57
COL9A1-201ENST00000320755 SNRPFP62306 86 aaKnown RBP18.61■□□□□ 0.57
COL9A1-201ENST00000320755 MAP3K10Q02779 954 aa18.61■□□□□ 0.57
COL9A1-201ENST00000320755 GKAP1Q5VSY0 366 aaPredicted RBP18.61■□□□□ 0.57
COL9A1-201ENST00000320755 MTMR14Q8NCE2 650 aa18.61■□□□□ 0.57
COL9A1-201ENST00000320755 TMC2Q8TDI7 906 aa18.61■□□□□ 0.57
COL9A1-201ENST00000320755 C11orf70Q9BRQ4 267 aa18.61■□□□□ 0.57
COL9A1-201ENST00000320755 ANKFY1Q9P2R3 1169 aa18.61■□□□□ 0.57
COL9A1-201ENST00000320755 PARP2Q9UGN5 583 aa18.61■□□□□ 0.57
COL9A1-201ENST00000320755 GJA3Q9Y6H8 435 aa18.61■□□□□ 0.57
COL9A1-201ENST00000320755 RGS20O76081 388 aa18.6■□□□□ 0.57
COL9A1-201ENST00000320755 GGPS1O95749 300 aa18.6■□□□□ 0.57
COL9A1-201ENST00000320755 WDR44Q5JSH3 913 aa18.6■□□□□ 0.57
COL9A1-201ENST00000320755 TAS1R3Q7RTX0 852 aa18.6■□□□□ 0.57
COL9A1-201ENST00000320755 SLC17A8Q8NDX2 589 aa18.6■□□□□ 0.57
COL9A1-201ENST00000320755 MORC4Q8TE76 937 aa18.6■□□□□ 0.57
COL9A1-201ENST00000320755 MLXIPLQ9NP71 852 aa18.6■□□□□ 0.57
COL9A1-201ENST00000320755 NLRP11P59045 1033 aaKnown RBP18.6■□□□□ 0.57
COL9A1-201ENST00000320755 LRRC14Q15048 493 aa18.6■□□□□ 0.57
COL9A1-201ENST00000320755 PSPC1Q8WXF1 523 aaKnown RBP18.6■□□□□ 0.57
COL9A1-201ENST00000320755 CHMP6Q96FZ7 201 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms