RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 COQ7Q99807 217 aa12.79□□□□□ -0.36
FARP1-201ENST00000319562 HIST1H2AGP0C0S8 130 aaPredicted RBP12.78□□□□□ -0.36
FARP1-201ENST00000319562 MYL2P10916 166 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 HIST1H2ADP20671 130 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 SLC16A2P36021 539 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 KNOP1Q1ED39 458 aaKnown RBP12.78□□□□□ -0.36
FARP1-201ENST00000319562 HIST1H2AHQ96KK5 128 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 HIST1H2AJQ99878 128 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 C17orf80Q9BSJ5 609 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 H2AFJQ9BTM1 129 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 ZMYND8Q9ULU4 1186 aaPredicted RBP12.78□□□□□ -0.36
FARP1-201ENST00000319562 ZHX2Q9Y6X8 837 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 RNF123Q5XPI4 1314 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 NCALDP61601 193 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 PLOD1Q02809 727 aaPredicted RBP12.78□□□□□ -0.36
FARP1-201ENST00000319562 ZNF568Q3ZCX4 644 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 USP17L2Q6R6M4 530 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 SCN4BQ8IWT1 228 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 SPATA4Q8NEY3 305 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 DEPDC7Q96QD5 511 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 FOXP3Q9BZS1 431 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 KRCC1Q9NPI7 259 aaPredicted RBP12.78□□□□□ -0.36
FARP1-201ENST00000319562 PSMC3IPQ9P2W1 217 aaPredicted RBP12.78□□□□□ -0.36
FARP1-201ENST00000319562 DSG1Q02413 1049 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 BFSP2Q13515 415 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 CTTNQ14247 550 aaKnown RBP12.78□□□□□ -0.36
FARP1-201ENST00000319562 FAM83BQ5T0W9 1011 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 CC2D2BQ6DHV5 1058 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 RIBC1Q8N443 379 aaPredicted RBP12.78□□□□□ -0.36
FARP1-201ENST00000319562 GALNT4Q8N4A0 578 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 FGFR4P22455 802 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 HPCAP84074 193 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 RASGRF1Q13972 1273 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 ZNF235Q14590 738 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 ZSWIM5Q9P217 1185 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 VHLP40337 213 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 TRIP10Q15642 601 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 ANO4Q32M45 955 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 TTC33Q6PID6 262 aaPredicted RBP12.78□□□□□ -0.36
FARP1-201ENST00000319562 C2orf40Q9H1Z8 148 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.78□□□□□ -0.36
FARP1-201ENST00000319562 ADORA1P30542 326 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 MLH1P40692 756 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 P3H1Q32P28 736 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 VPS50Q96JG6 964 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 GCLMP48507 274 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 NCKAP1LP55160 1127 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 C16orf72Q14CZ0 275 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 MDH1BQ5I0G3 518 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 AGBL2Q5U5Z8 902 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 ASZ1Q8WWH4 475 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 SEC16BQ96JE7 1060 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 M0QYV0 167 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 RGS5O15539 181 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 EIF3EP60228 445 aaKnown RBP12.78□□□□□ -0.36
FARP1-201ENST00000319562 NME3Q13232 169 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 DRAP1Q14919 205 aaPredicted RBP12.78□□□□□ -0.36
FARP1-201ENST00000319562 DCAF4L1Q3SXM0 396 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 GPR141Q7Z602 305 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 VPS37AQ8NEZ2 397 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 PCSK1NQ9UHG2 260 aa12.78□□□□□ -0.36
FARP1-201ENST00000319562 CHN1P15882 459 aa12.77□□□□□ -0.36
FARP1-201ENST00000319562 MAPRE1Q15691 268 aaKnown RBP12.77□□□□□ -0.36
FARP1-201ENST00000319562 RCOR2Q8IZ40 523 aa12.77□□□□□ -0.36
FARP1-201ENST00000319562 C11orf70Q9BRQ4 267 aa12.77□□□□□ -0.36
FARP1-201ENST00000319562 EVPLLA8MZ36 301 aa12.77□□□□□ -0.36
FARP1-201ENST00000319562 COPB2P35606 906 aa12.77□□□□□ -0.36
FARP1-201ENST00000319562 PLA2G4AP47712 749 aa12.77□□□□□ -0.36
FARP1-201ENST00000319562 CDH6P55285 790 aa12.77□□□□□ -0.36
FARP1-201ENST00000319562 SMARCAD1Q9H4L7 1026 aa12.77□□□□□ -0.36
FARP1-201ENST00000319562 PNMA3Q9UL41 463 aa12.77□□□□□ -0.36
FARP1-201ENST00000319562 AP3M2P53677 418 aa12.77□□□□□ -0.36
FARP1-201ENST00000319562 ZNF211Q13398 564 aaPredicted RBP12.77□□□□□ -0.36
FARP1-201ENST00000319562 CNGA2Q16280 664 aa12.77□□□□□ -0.36
FARP1-201ENST00000319562 FBXW10Q5XX13 1052 aa12.77□□□□□ -0.36
FARP1-201ENST00000319562 NUDT18Q6ZVK8 323 aa12.77□□□□□ -0.36
FARP1-201ENST00000319562 CNDP1Q96KN2 507 aa12.77□□□□□ -0.36
FARP1-201ENST00000319562 DHX35Q9H5Z1 703 aaKnown RBP12.77□□□□□ -0.36
FARP1-201ENST00000319562 HSPBP1Q9NZL4 362 aa12.77□□□□□ -0.36
FARP1-201ENST00000319562 PRCPP42785 496 aa12.77□□□□□ -0.36
FARP1-201ENST00000319562 FAM102AQ5T9C2 384 aaPredicted RBP12.77□□□□□ -0.36
FARP1-201ENST00000319562 EFL1Q7Z2Z2 1120 aaKnown RBP12.77□□□□□ -0.36
FARP1-201ENST00000319562 STAG2Q8N3U4 1231 aa12.77□□□□□ -0.36
FARP1-201ENST00000319562 ATXN7L3BQ96GX2 97 aa12.77□□□□□ -0.36
FARP1-201ENST00000319562 DFFAO00273 331 aa12.77□□□□□ -0.37
FARP1-201ENST00000319562 CCDC149Q6ZUS6 474 aa12.77□□□□□ -0.37
FARP1-201ENST00000319562 GREM2Q9H772 168 aa12.77□□□□□ -0.37
FARP1-201ENST00000319562 STK36Q9NRP7 1315 aa12.77□□□□□ -0.37
FARP1-201ENST00000319562 KCNN4O15554 427 aa12.77□□□□□ -0.37
FARP1-201ENST00000319562 TRIM13O60858 407 aa12.77□□□□□ -0.37
FARP1-201ENST00000319562 SPAG6O75602 509 aa12.77□□□□□ -0.37
FARP1-201ENST00000319562 PRELPP51888 382 aa12.77□□□□□ -0.37
FARP1-201ENST00000319562 MTMR1Q13613 665 aa12.77□□□□□ -0.37
FARP1-201ENST00000319562 NLRP9Q7RTR0 991 aa12.77□□□□□ -0.37
FARP1-201ENST00000319562 RNPC3Q96LT9 517 aaKnown RBP12.77□□□□□ -0.37
FARP1-201ENST00000319562 FANCEQ9HB96 536 aa12.77□□□□□ -0.37
FARP1-201ENST00000319562 RTN2O75298 545 aa12.77□□□□□ -0.37
FARP1-201ENST00000319562 ACCSLQ4AC99 568 aa12.77□□□□□ -0.37
FARP1-201ENST00000319562 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.77□□□□□ -0.37
FARP1-201ENST00000319562 ESYT3A0FGR9 886 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms