RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 TMED8Q6PL24 325 aaPredicted RBP4.94□□□□□ -1.62
SMCO3-201ENST00000316048 APBB1IPQ7Z5R6 666 aaPredicted RBP4.94□□□□□ -1.62
SMCO3-201ENST00000316048 PPP1R3BQ86XI6 285 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 UNC5BQ8IZJ1 945 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 DCBLD1Q8N8Z6 715 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 C3orf20Q8ND61 904 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 UHRF1Q96T88 793 aaPredicted RBP4.94□□□□□ -1.62
SMCO3-201ENST00000316048 DCP1AQ9NPI6 582 aaPredicted RBP4.94□□□□□ -1.62
SMCO3-201ENST00000316048 CFDP1Q9UEE9 299 aaPredicted RBP4.94□□□□□ -1.62
SMCO3-201ENST00000316048 AJAP1Q9UKB5 411 aaPredicted RBP4.94□□□□□ -1.62
SMCO3-201ENST00000316048 PCDHA6Q9UN73 950 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 RUVBL1Q9Y265 456 aaKnown RBP4.94□□□□□ -1.62
SMCO3-201ENST00000316048 PCDHA1Q9Y5I3 950 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 SNX13Q9Y5W8 968 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 MYBBP1AQ9BQG0 1328 aaKnown RBP4.94□□□□□ -1.62
SMCO3-201ENST00000316048 HFM1A2PYH4 1435 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 KLRG2A4D1S0 409 aaPredicted RBP4.93□□□□□ -1.62
SMCO3-201ENST00000316048 C2orf78A6NCI8 922 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 ENDOD1O94919 500 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 TYRP14679 529 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 NPR1P16066 1061 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 IL6STP40189 918 aaPredicted RBP4.93□□□□□ -1.62
SMCO3-201ENST00000316048 PER3P56645 1201 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 MEF2AQ02078 507 aaPredicted RBP4.93□□□□□ -1.62
SMCO3-201ENST00000316048 TLE1Q04724 770 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 PRR31Q5SQ13 230 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 CIAPIN1Q6FI81 312 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 PPP4R3AQ6IN85 833 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 RSPH3Q86UC2 560 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 ZNF480Q8WV37 535 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 FAM168AQ92567 244 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 PHKBQ93100 1093 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 UIMC1Q96RL1 719 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 OSBPL6Q9BZF3 934 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 NUP62CLQ9H1M0 184 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 TPCN1Q9ULQ1 816 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 ABCA8O94911 1581 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 SLC16A6O15403 523 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 ITGA10O75578 1167 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 ALDH1A2O94788 518 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 FSBPO95073 299 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 PFKLP17858 780 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 MALP21145 153 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 ATP8B2P98198 1209 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 GPR155Q7Z3F1 870 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 CLEC14AQ86T13 490 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 TRMT2AQ8IZ69 625 aaKnown RBP4.93□□□□□ -1.62
SMCO3-201ENST00000316048 ANKS1AQ92625 1134 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 APIPQ96GX9 242 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 C1orf43Q9BWL3 253 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 STK32BQ9NY57 414 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 CPNE7Q9UBL6 633 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 FAM184BQ9ULE4 1060 aa4.93□□□□□ -1.62
SMCO3-201ENST00000316048 RBM8AQ9Y5S9 174 aaKnown RBP4.93□□□□□ -1.62
SMCO3-201ENST00000316048 ATP10BO94823 1461 aa4.92□□□□□ -1.62
SMCO3-201ENST00000316048 SCO2A0A1W2PP80 73 aa4.92□□□□□ -1.62
SMCO3-201ENST00000316048 TBX3O15119 743 aa4.92□□□□□ -1.62
SMCO3-201ENST00000316048 AHSGP02765 367 aa4.92□□□□□ -1.62
SMCO3-201ENST00000316048 ZNF888P0CJ79 500 aaPredicted RBP4.92□□□□□ -1.62
SMCO3-201ENST00000316048 POLD1P28340 1107 aa4.92□□□□□ -1.62
SMCO3-201ENST00000316048 HALP42357 657 aa4.92□□□□□ -1.62
SMCO3-201ENST00000316048 FGL2Q14314 439 aa4.92□□□□□ -1.62
SMCO3-201ENST00000316048 PCOLCEQ15113 449 aa4.92□□□□□ -1.62
SMCO3-201ENST00000316048 THEMIS2Q5TEJ8 643 aa4.92□□□□□ -1.62
SMCO3-201ENST00000316048 KLHDC7AQ5VTJ3 777 aa4.92□□□□□ -1.62
SMCO3-201ENST00000316048 TRIM68Q6AZZ1 485 aa4.92□□□□□ -1.62
SMCO3-201ENST00000316048 TAS1R1Q7RTX1 841 aa4.92□□□□□ -1.62
SMCO3-201ENST00000316048 DEPTORQ8TB45 409 aa4.92□□□□□ -1.62
SMCO3-201ENST00000316048 EPB41L4BQ9H329 900 aa4.92□□□□□ -1.62
SMCO3-201ENST00000316048 RRP7BPQ9NSQ0 103 aa4.92□□□□□ -1.62
SMCO3-201ENST00000316048 PNPOQ9NVS9 261 aa4.92□□□□□ -1.62
SMCO3-201ENST00000316048 SPATA6Q9NWH7 488 aaPredicted RBP4.92□□□□□ -1.62
SMCO3-201ENST00000316048 ACTL7AQ9Y615 435 aa4.92□□□□□ -1.62
SMCO3-201ENST00000316048 PTPRKQ15262 1439 aa4.92□□□□□ -1.62
SMCO3-201ENST00000316048 UACAQ9BZF9 1416 aa4.92□□□□□ -1.62
SMCO3-201ENST00000316048 SHROOM2Q13796 1616 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 A0A1W2PPL8 197 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 POM121BA6NF01 834 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 NT5C1B-RDH14C9J2C7 533 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 MYO1FO00160 1098 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 PPFIA4O75335 1185 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 GPR32O75388 356 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 TSHRP16473 764 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 ZNF28P17035 718 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 DDCP20711 480 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 SLC7A1P30825 629 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 GUCY1A2P33402 732 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 IL13P35225 146 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 ETV4P43268 484 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 GPSM2P81274 684 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 ZNF543Q08ER8 600 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 MTM1Q13496 603 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 PRAMEF14Q5SWL7 426 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 TMEM132EQ6IEE7 984 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 SESTD1Q86VW0 696 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 TMEFF1Q8IYR6 380 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 OR7D4Q8NG98 312 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 MDM1Q8TC05 714 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 PTPN18Q99952 460 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 SPATA25Q9BR10 227 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms