RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 PCDHB2Q9Y5E7 798 aa13.61□□□□□ -0.23
SH3PXD2A-201ENST00000315994 KRT37O76014 449 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 CTSHP09668 335 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 LCP1P13796 627 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 ST3GAL1Q11201 340 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 TRIM59Q8IWR1 403 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 SENP7Q9BQF6 1050 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 LRRC4BQ9NT99 713 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 TARSL2A2RTX5 802 aaKnown RBP13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 CPB1P15086 417 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 NOP14P78316 857 aaKnown RBP13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 NME3Q13232 169 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 AFG1LQ8WV93 481 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 PDCD2LQ9BRP1 358 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 VCX3BQ9H321 246 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 TAF1DQ9H5J8 278 aaPredicted RBP13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 ARHGAP42A6NI28 874 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 GPC4O75487 556 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 BRD2P25440 801 aaKnown RBP13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 NFKBIAP25963 317 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 NAMPTP43490 491 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 CCT5P48643 541 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 BTBD8Q5XKL5 378 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 NOTUMQ6P988 496 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 NDUFAF2Q8N183 169 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 SNF8Q96H20 258 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 TARS2Q9BW92 718 aaKnown RBP13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 DHX35Q9H5Z1 703 aaKnown RBP13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 GBA2Q9HCG7 927 aaPredicted RBP13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 RRP15Q9Y3B9 282 aaKnown RBP13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 KRT14P02533 472 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 PCK1P35558 622 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 PMS2P54278 862 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 TMEM62Q0P6H9 643 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 DCAF4L1Q3SXM0 396 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 LMNTD2Q8IXW0 634 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 C4orf19Q8IY42 314 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 CPA5Q8WXQ8 436 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 PPP2R3CQ969Q6 453 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 EXOC4Q96A65 974 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 KCNQ5Q9NR82 932 aa13.6□□□□□ -0.23
SH3PXD2A-201ENST00000315994 VIL1P09327 827 aaKnown RBP13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 CLTAP09496 248 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 ITGA4P13612 1032 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 CD44P16070 742 aaKnown RBP13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 KLK7P49862 253 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 CDH6P55285 790 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 HNRNPH2P55795 449 aaKnown RBP13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 CDK17Q00537 523 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 NR1H3Q13133 447 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 KLHL38Q2WGJ6 581 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 RAD9BQ6WBX8 426 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 RCOR2Q8IZ40 523 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 AKT1S1Q96B36 256 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 OPTNQ96CV9 577 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 NIF3L1Q9GZT8 377 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 ANGPTL3Q9Y5C1 460 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 CAPN7Q9Y6W3 813 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 DPYSL4O14531 572 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 NOL3O60936 208 aaKnown RBP13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 PPARGP37231 505 aaPredicted RBP13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 PGM5Q15124 567 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 SV2CQ496J9 727 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 SPATA4Q8NEY3 305 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 AKAP12Q02952 1782 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 DISP2A7MBM2 1401 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 CXCL11O14625 94 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 APOEP02649 317 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 TRAPPC11Q7Z392 1133 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 SPATA2LQ8IUW3 424 aaPredicted RBP13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 SLC30A5Q8TAD4 765 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 FSD1LQ9BXM9 530 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 HPCAL4Q9UM19 191 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 POLIQ9UNA4 740 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 RSPH10B2B2RC85 870 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 DDNO94850 711 aaPredicted RBP13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 TMEM253P0C7T8 217 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 RSPH10BP0C881 870 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 RHBDL3P58872 404 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 ITPRIPL1Q6GPH6 555 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 KIFC3Q9BVG8 833 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 PRDM4Q9UKN5 801 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 C17orf102A2RUQ5 167 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 VWA5AO00534 786 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 APOL1O14791 398 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 RALAP11233 206 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 CLNS1AP54105 237 aaKnown RBP13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 ZKSCAN8Q15776 578 aaPredicted RBP13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 GANCQ8TET4 914 aa13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 DBR1Q9UK59 544 aaKnown RBP13.59□□□□□ -0.23
SH3PXD2A-201ENST00000315994 F8W8V4 182 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 ZWINTO95229 277 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 CA4P22748 312 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 PMLP29590 882 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 SLC26A2P50443 739 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 NT5C1AQ9BXI3 368 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 PRDM5Q9NQX1 630 aaPredicted RBP13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 BAIAP2L1Q9UHR4 511 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 GPS1Q13098 491 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 PIGHQ14442 188 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms