RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 RECQL4O94761 1208 aa13.46□□□□□ -0.25
TPT1-201ENST00000309246 EDN1P05305 212 aa13.46□□□□□ -0.25
TPT1-201ENST00000309246 LAMP2P13473 410 aa13.46□□□□□ -0.25
TPT1-201ENST00000309246 NEK4P51957 841 aa13.46□□□□□ -0.25
TPT1-201ENST00000309246 PRPF4BQ13523 1007 aaKnown RBP13.46□□□□□ -0.25
TPT1-201ENST00000309246 ANGPT1Q15389 498 aa13.46□□□□□ -0.25
TPT1-201ENST00000309246 FAM187BQ17R55 369 aa13.46□□□□□ -0.25
TPT1-201ENST00000309246 FAM171A1Q5VUB5 890 aa13.46□□□□□ -0.25
TPT1-201ENST00000309246 CEP57Q86XR8 500 aa13.46□□□□□ -0.25
TPT1-201ENST00000309246 GPR65Q8IYL9 337 aa13.46□□□□□ -0.25
TPT1-201ENST00000309246 GPR152Q8TDT2 470 aa13.46□□□□□ -0.25
TPT1-201ENST00000309246 SNX27Q96L92 541 aa13.46□□□□□ -0.25
TPT1-201ENST00000309246 FBXW11Q9UKB1 542 aa13.46□□□□□ -0.25
TPT1-201ENST00000309246 COL4A3Q01955 1670 aa13.46□□□□□ -0.26
TPT1-201ENST00000309246 ZFHX2Q9C0A1 2572 aaPredicted RBP13.45□□□□□ -0.26
TPT1-201ENST00000309246 PDCD11Q14690 1871 aaKnown RBP13.45□□□□□ -0.26
TPT1-201ENST00000309246 ARHGEF35A5YM69 484 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 C1RP00736 705 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 PRKCBP05771 671 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 THP07101 528 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 SRFP11831 508 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 NTHL1P78549 312 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 HTR4Q13639 388 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 NAB2Q15742 525 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 PSMD5Q16401 504 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 MAPK6Q16659 721 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 EEF1DP3Q658K8 133 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 PADI6Q6TGC4 694 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 GRASPQ7Z6J2 395 aaPredicted RBP13.45□□□□□ -0.26
TPT1-201ENST00000309246 NOSTRINQ8IVI9 506 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 PIK3R5Q8WYR1 880 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 NXPE3Q969Y0 559 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 NACC1Q96RE7 527 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 CLSTN3Q9BQT9 956 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 TTPALQ9BTX7 342 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 POLR3CQ9BUI4 534 aaPredicted RBP13.45□□□□□ -0.26
TPT1-201ENST00000309246 CCDC113Q9H0I3 377 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 C2orf40Q9H1Z8 148 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 TBC1D17Q9HA65 648 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.45□□□□□ -0.26
TPT1-201ENST00000309246 GDAQ9Y2T3 454 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 NUMBLQ9Y6R0 609 aa13.45□□□□□ -0.26
TPT1-201ENST00000309246 PATJQ8NI35 1801 aa13.44□□□□□ -0.26
TPT1-201ENST00000309246 ANHXE9PGG2 379 aa13.44□□□□□ -0.26
TPT1-201ENST00000309246 ADAM12O43184 909 aa13.44□□□□□ -0.26
TPT1-201ENST00000309246 OR52Z1P0C646 297 aa13.44□□□□□ -0.26
TPT1-201ENST00000309246 FSHRP23945 695 aa13.44□□□□□ -0.26
TPT1-201ENST00000309246 NAMPTP43490 491 aa13.44□□□□□ -0.26
TPT1-201ENST00000309246 SAFBQ15424 915 aaKnown RBP eCLIP13.44□□□□□ -0.26
TPT1-201ENST00000309246 ZNF174Q15697 407 aa13.44□□□□□ -0.26
TPT1-201ENST00000309246 LIN9Q5TKA1 542 aa13.44□□□□□ -0.26
TPT1-201ENST00000309246 ERMNQ8TAM6 284 aa13.44□□□□□ -0.26
TPT1-201ENST00000309246 DEPTORQ8TB45 409 aa13.44□□□□□ -0.26
TPT1-201ENST00000309246 LNX1Q8TBB1 728 aaPredicted RBP13.44□□□□□ -0.26
TPT1-201ENST00000309246 ADPGKQ9BRR6 497 aa13.44□□□□□ -0.26
TPT1-201ENST00000309246 KIFC3Q9BVG8 833 aa13.44□□□□□ -0.26
TPT1-201ENST00000309246 POLD4Q9HCU8 107 aa13.44□□□□□ -0.26
TPT1-201ENST00000309246 ARHGEF3Q9NR81 526 aa13.44□□□□□ -0.26
TPT1-201ENST00000309246 ACKR2O00590 384 aa13.43□□□□□ -0.26
TPT1-201ENST00000309246 CCL16O15467 120 aa13.43□□□□□ -0.26
TPT1-201ENST00000309246 C8AP07357 584 aa13.43□□□□□ -0.26
TPT1-201ENST00000309246 CYP11B2P19099 503 aa13.43□□□□□ -0.26
TPT1-201ENST00000309246 RPA1P27694 616 aa13.43□□□□□ -0.26
TPT1-201ENST00000309246 GLRA4Q5JXX5 417 aa13.43□□□□□ -0.26
TPT1-201ENST00000309246 SPECC1Q5M775 1068 aa13.43□□□□□ -0.26
TPT1-201ENST00000309246 PPM1LQ5SGD2 360 aa13.43□□□□□ -0.26
TPT1-201ENST00000309246 RIF1Q5UIP0 2472 aaKnown RBP13.43□□□□□ -0.26
TPT1-201ENST00000309246 CCDC83Q8IWF9 413 aa13.43□□□□□ -0.26
TPT1-201ENST00000309246 ADSSL1Q8N142 457 aa13.43□□□□□ -0.26
TPT1-201ENST00000309246 EFCAB3Q8N7B9 438 aa13.43□□□□□ -0.26
TPT1-201ENST00000309246 C8orf76Q96K31 380 aa13.43□□□□□ -0.26
TPT1-201ENST00000309246 RPP25Q9BUL9 199 aaKnown RBP13.43□□□□□ -0.26
TPT1-201ENST00000309246 POLIQ9UNA4 740 aa13.43□□□□□ -0.26
TPT1-201ENST00000309246 USP34Q70CQ2 3546 aa13.42□□□□□ -0.26
TPT1-201ENST00000309246 CACNA1IQ9P0X4 2223 aa13.42□□□□□ -0.26
TPT1-201ENST00000309246 DCNP07585 359 aaKnown RBP13.42□□□□□ -0.26
TPT1-201ENST00000309246 HNRNPA1P09651 372 aaKnown RBP eCLIP13.42□□□□□ -0.26
TPT1-201ENST00000309246 IGFBP6P24592 240 aaPredicted RBP13.42□□□□□ -0.26
TPT1-201ENST00000309246 ELAVL2Q12926 359 aaKnown RBP13.42□□□□□ -0.26
TPT1-201ENST00000309246 PPP2R5AQ15172 486 aa13.42□□□□□ -0.26
TPT1-201ENST00000309246 ECM1Q16610 540 aa13.42□□□□□ -0.26
TPT1-201ENST00000309246 DCAF4L1Q3SXM0 396 aa13.42□□□□□ -0.26
TPT1-201ENST00000309246 TTC38Q5R3I4 469 aa13.42□□□□□ -0.26
TPT1-201ENST00000309246 PARM1Q6UWI2 310 aa13.42□□□□□ -0.26
TPT1-201ENST00000309246 SLC7A14Q8TBB6 771 aa13.42□□□□□ -0.26
TPT1-201ENST00000309246 FGF14Q92915 247 aa13.42□□□□□ -0.26
TPT1-201ENST00000309246 SLC2A4RGQ9NR83 387 aa13.42□□□□□ -0.26
TPT1-201ENST00000309246 CDH7Q9ULB5 785 aa13.42□□□□□ -0.26
TPT1-201ENST00000309246 OR1D2P34982 312 aa13.41□□□□□ -0.26
TPT1-201ENST00000309246 CCT6AP40227 531 aaKnown RBP13.41□□□□□ -0.26
TPT1-201ENST00000309246 NBR1Q14596 966 aa13.41□□□□□ -0.26
TPT1-201ENST00000309246 NT5DC1Q5TFE4 455 aa13.41□□□□□ -0.26
TPT1-201ENST00000309246 ATF7IP2Q5U623 682 aa13.41□□□□□ -0.26
TPT1-201ENST00000309246 HAUS3Q68CZ6 603 aa13.41□□□□□ -0.26
TPT1-201ENST00000309246 PHLDB3Q6NSJ2 640 aa13.41□□□□□ -0.26
TPT1-201ENST00000309246 DCLRE1AQ6PJP8 1040 aa13.41□□□□□ -0.26
TPT1-201ENST00000309246 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.41□□□□□ -0.26
TPT1-201ENST00000309246 ITFG1Q8TB96 612 aa13.41□□□□□ -0.26
TPT1-201ENST00000309246 IFT74Q96LB3 600 aa13.41□□□□□ -0.26
TPT1-201ENST00000309246 PPP1R10Q96QC0 940 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms