RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 GRIK5Q16478 980 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 PRELID2Q8N945 189 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 CFAP36Q96G28 342 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 HES6Q96HZ4 224 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 MAGEB18Q96M61 343 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 RPS6KC1Q96S38 1066 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 ZC3H4Q9UPT8 1303 aaKnown RBP14.29□□□□□ -0.12
SEC23A-201ENST00000307712 TBX3O15119 743 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 RNF8O76064 485 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 KRT16P08779 473 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 GRAMD1BQ3KR37 738 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 COBLL1Q53SF7 1204 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 TMEM179Q6ZVK1 233 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 CYP2W1Q8TAV3 490 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 SMG5Q9UPR3 1016 aaKnown RBP14.29□□□□□ -0.12
SEC23A-201ENST00000307712 COPEO14579 308 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 PFDN1O60925 122 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 EIF2AK2P19525 551 aaKnown RBP14.29□□□□□ -0.12
SEC23A-201ENST00000307712 MMP13P45452 471 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 EPHB1P54762 984 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 KDSRQ06136 332 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 ALCAMQ13740 583 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 LRRC36Q1X8D7 754 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 CRELD2Q6UXH1 353 aaPredicted RBP14.29□□□□□ -0.12
SEC23A-201ENST00000307712 EXOC3L1Q86VI1 746 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 PPP4R1Q8TF05 950 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 LRRC15Q8TF66 581 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 GTF3C4Q9UKN8 822 aa14.29□□□□□ -0.12
SEC23A-201ENST00000307712 IQANK1A0A1B0GTG1 560 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 CCDC195A0A1B0GUA6 201 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 DENND3A2RUS2 1198 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 CCDC22O60826 627 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 NUDT17P0C025 328 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 TAL1P17542 331 aaPredicted RBP14.28□□□□□ -0.12
SEC23A-201ENST00000307712 COG7P83436 770 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 RCN1Q15293 331 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 SYCP2LQ5T4T6 812 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 CCDC125Q86Z20 511 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 TEX9Q8N6V9 391 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 ATXN2LQ8WWM7 1075 aaKnown RBP14.28□□□□□ -0.12
SEC23A-201ENST00000307712 ARHGEF1Q92888 912 aaKnown RBP14.28□□□□□ -0.12
SEC23A-201ENST00000307712 SLC5A5Q92911 643 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 ATP2A3Q93084 1043 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 RGPD8O14715 1765 aaPredicted RBP14.28□□□□□ -0.12
SEC23A-201ENST00000307712 A8MUI8 341 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 EIF3DO15371 548 aaKnown RBP eCLIP14.28□□□□□ -0.12
SEC23A-201ENST00000307712 LPXNO60711 386 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 GNAT1P11488 350 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 NCALDP61601 193 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.28□□□□□ -0.12
SEC23A-201ENST00000307712 CBWD6Q4V339 395 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 CEP55Q53EZ4 464 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 LACTB2Q53H82 288 aaPredicted RBP14.28□□□□□ -0.12
SEC23A-201ENST00000307712 CBWD3Q5JTY5 395 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 CBWD5Q5RIA9 395 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 NLRP9Q7RTR0 991 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 SPATA24Q86W54 205 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 ELMO3Q96BJ8 720 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 RBM41Q96IZ5 413 aaKnown RBP14.28□□□□□ -0.12
SEC23A-201ENST00000307712 IKZF4Q9H2S9 585 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 TUFT1Q9NNX1 390 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 SENP1Q9P0U3 644 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 CLRN2A0PK11 232 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 SPECC1L-ADORA2AF8WAN1 911 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 UBTFL6P0CB48 400 aaPredicted RBP14.28□□□□□ -0.12
SEC23A-201ENST00000307712 SYDE1Q6ZW31 735 aaPredicted RBP14.28□□□□□ -0.12
SEC23A-201ENST00000307712 BZW1Q7L1Q6 419 aaKnown RBP14.28□□□□□ -0.12
SEC23A-201ENST00000307712 RHPN2Q8IUC4 686 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 PI4K2AQ9BTU6 479 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 RTFDC1Q9BY42 306 aaPredicted RBP14.28□□□□□ -0.12
SEC23A-201ENST00000307712 KCTD10Q9H3F6 313 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 IFT122Q9HBG6 1241 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 ACP6Q9NPH0 428 aa14.28□□□□□ -0.12
SEC23A-201ENST00000307712 METTL5Q9NRN9 209 aaKnown RBP14.28□□□□□ -0.12
SEC23A-201ENST00000307712 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.27□□□□□ -0.12
SEC23A-201ENST00000307712 GTPBP10A4D1E9 387 aaKnown RBP14.27□□□□□ -0.12
SEC23A-201ENST00000307712 DKC1O60832 514 aaKnown RBP eCLIP14.27□□□□□ -0.122e-12■■■□□ 17.2
SEC23A-201ENST00000307712 SERPINB4P48594 390 aa14.27□□□□□ -0.12
SEC23A-201ENST00000307712 HIF1AQ16665 826 aa14.27□□□□□ -0.12
SEC23A-201ENST00000307712 DARS2Q6PI48 645 aaKnown RBP14.27□□□□□ -0.12
SEC23A-201ENST00000307712 PPM1NQ8N819 430 aa14.27□□□□□ -0.12
SEC23A-201ENST00000307712 LRRC57Q8N9N7 239 aa14.27□□□□□ -0.12
SEC23A-201ENST00000307712 PAGR1Q9BTK6 254 aa14.27□□□□□ -0.12
SEC23A-201ENST00000307712 SCINQ9Y6U3 715 aa14.27□□□□□ -0.12
SEC23A-201ENST00000307712 SLIT3O75094 1523 aa14.27□□□□□ -0.12
SEC23A-201ENST00000307712 ZBTB39O15060 712 aa14.27□□□□□ -0.12
SEC23A-201ENST00000307712 MCF2LO15068 1137 aa14.27□□□□□ -0.12
SEC23A-201ENST00000307712 CBX6O95503 412 aa14.27□□□□□ -0.12
SEC23A-201ENST00000307712 KRT81Q14533 505 aa14.27□□□□□ -0.12
SEC23A-201ENST00000307712 ARHGEF16Q5VV41 709 aa14.27□□□□□ -0.12
SEC23A-201ENST00000307712 CBWD1Q9BRT8 395 aa14.27□□□□□ -0.12
SEC23A-201ENST00000307712 IRAK4Q9NWZ3 460 aa14.27□□□□□ -0.12
SEC23A-201ENST00000307712 BTNL10A8MVZ5 291 aa14.27□□□□□ -0.13
SEC23A-201ENST00000307712 NDUFB10O96000 172 aa14.27□□□□□ -0.13
SEC23A-201ENST00000307712 ENO1P06733 434 aaKnown RBP14.27□□□□□ -0.13
SEC23A-201ENST00000307712 EPHB2P29323 1055 aa14.27□□□□□ -0.13
SEC23A-201ENST00000307712 POLR2BP30876 1174 aaKnown RBP14.27□□□□□ -0.13
SEC23A-201ENST00000307712 ST13P4Q8IZP2 240 aaPredicted RBP14.27□□□□□ -0.13
SEC23A-201ENST00000307712 TSSK1BQ9BXA7 367 aa14.27□□□□□ -0.13
SEC23A-201ENST00000307712 SLC13A1Q9BZW2 595 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms