RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 CLTAP09496 248 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 SLC2A3P11169 496 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 VCAM1P19320 739 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 NR1H3Q13133 447 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 CAPRIN1Q14444 709 aaKnown RBP8.83□□□□□ -1
PCDHB1-201ENST00000306549 MSL3Q8N5Y2 521 aaKnown RBP8.83□□□□□ -1
PCDHB1-201ENST00000306549 IGDCC4Q8TDY8 1250 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 PKD1L3Q7Z443 1732 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 RP1L1Q8IWN7 2480 aaPredicted RBP8.83□□□□□ -1
PCDHB1-201ENST00000306549 GON4LQ3T8J9 2241 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 ZNF197O14709 1029 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 FGFR2P21802 821 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 GARTP22102 1010 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 SLC8A1P32418 973 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 TMEM132BQ14DG7 1078 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 PCNX4Q63HM2 1172 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 RASGRP4Q8TDF6 673 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 PIN4Q9Y237 131 aaKnown RBP8.83□□□□□ -1
PCDHB1-201ENST00000306549 PCDHB12Q9Y5F1 795 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 POC1B-GALNT4F8VUJ3 575 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 ANP32DO95626 131 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 CYP2C9P11712 490 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 TMEM132DQ14C87 1099 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 DACT2Q5SW24 774 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 AKAP11Q9UKA4 1901 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 EGFRP00533 1210 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 KRT1P04264 644 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 ITGA4P13612 1032 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 RFX5P48382 616 aaPredicted RBP8.82□□□□□ -1
PCDHB1-201ENST00000306549 VAMP7P51809 220 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 SDE2Q6IQ49 451 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 CALN1Q9BXU9 219 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 MRPL40Q9NQ50 206 aaKnown RBP8.82□□□□□ -1
PCDHB1-201ENST00000306549 RGL1Q9NZL6 768 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 HERVK_113P62684 666 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 MAP3K10Q02779 954 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 TFDP2Q14188 446 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 EDRF1Q3B7T1 1238 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 OR6B2Q6IFH4 312 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 NCLNQ969V3 563 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 PBXIP1Q96AQ6 731 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 ZNF653Q96CK0 615 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 SLITRK1Q96PX8 696 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 MKNK1Q9BUB5 465 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 FTHL17Q9BXU8 183 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 FKTNO75072 461 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 U2AF2P26368 475 aaKnown RBP eCLIP8.82□□□□□ -1
PCDHB1-201ENST00000306549 RPA1P27694 616 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 GTF2H3Q13889 308 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 NDEL1Q9GZM8 345 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 STARD7Q9NQZ5 370 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 NFU1Q9UMS0 254 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 POLR2AP24928 1970 aaKnown RBP8.82□□□□□ -1
PCDHB1-201ENST00000306549 KDM1AO60341 852 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 KRT8P05787 483 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 EEF1DP29692 281 aaKnown RBP8.82□□□□□ -1
PCDHB1-201ENST00000306549 SLC26A7Q8TE54 656 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 ZC4H2Q9NQZ6 224 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 PEAK1Q9H792 1746 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 GUCY2FP51841 1108 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 CYB5R4Q7L1T6 521 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 MTMR14Q8NCE2 650 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 NDST4Q9H3R1 872 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 KIAA1257Q9ULG3 409 aa8.82□□□□□ -1
PCDHB1-201ENST00000306549 E5RI56 91 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 PPP1R12AO14974 1030 aaPredicted RBP8.81□□□□□ -1
PCDHB1-201ENST00000306549 ZBED1O96006 694 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 CYP2B6P20813 491 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 BRD3Q15059 726 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 SGSM1Q2NKQ1 1148 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 KIF19Q2TAC6 998 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 SLFNL1Q499Z3 407 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 SGO2Q562F6 1265 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 ZBTB41Q5SVQ8 909 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 PGBD3Q8N328 593 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 PHF21AQ96BD5 680 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 KIF12Q96FN5 646 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 PRMT6Q96LA8 375 aaPredicted RBP8.81□□□□□ -1
PCDHB1-201ENST00000306549 PANX2Q96RD6 677 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 UBE2TQ9NPD8 197 aaPredicted RBP8.81□□□□□ -1
PCDHB1-201ENST00000306549 DNAJC17Q9NVM6 304 aaKnown RBP8.81□□□□□ -1
PCDHB1-201ENST00000306549 NAV1Q8NEY1 1877 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 GOLGA8SH3BPF8 625 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 PLS3P13797 630 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 RESTQ13127 1097 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 MESDQ14696 234 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 KRT80Q6KB66 452 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 RNF149Q8NC42 400 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 RTFDC1Q9BY42 306 aaPredicted RBP8.81□□□□□ -1
PCDHB1-201ENST00000306549 TRIM55Q9BYV6 548 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 BCL9LQ86UU0 1499 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 DYNC1LI2O43237 492 aaPredicted RBP8.81□□□□□ -1
PCDHB1-201ENST00000306549 ST8SIA6P61647 398 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 RPS6P62753 249 aaKnown RBP8.81□□□□□ -1
PCDHB1-201ENST00000306549 CUL1Q13616 776 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 CTTNQ14247 550 aaKnown RBP8.81□□□□□ -1
PCDHB1-201ENST00000306549 RCN2Q14257 317 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 SKAP1Q86WV1 359 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.81□□□□□ -1
PCDHB1-201ENST00000306549 FGFR1OP2Q9NVK5 253 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms