RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 PTGDRQ13258 359 aa15.44■□□□□ 0.06
TPM1-202ENST00000288398 PDIA5Q14554 519 aa15.44■□□□□ 0.06
TPM1-202ENST00000288398 MCTP1Q6DN14 999 aa15.44■□□□□ 0.06
TPM1-202ENST00000288398 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.44■□□□□ 0.06
TPM1-202ENST00000288398 DTHD1Q6ZMT9 781 aa15.44■□□□□ 0.06
TPM1-202ENST00000288398 ZNF707Q96C28 371 aaPredicted RBP15.44■□□□□ 0.06
TPM1-202ENST00000288398 DRC1Q96MC2 740 aa15.44■□□□□ 0.06
TPM1-202ENST00000288398 PAAF1Q9BRP4 392 aa15.44■□□□□ 0.06
TPM1-202ENST00000288398 TCHPQ9BT92 498 aa15.44■□□□□ 0.06
TPM1-202ENST00000288398 ZFP37Q9Y6Q3 630 aaPredicted RBP15.44■□□□□ 0.06
TPM1-202ENST00000288398 TTLL13PA6NNM8 815 aa15.43■□□□□ 0.06
TPM1-202ENST00000288398 PTGESO14684 152 aa15.43■□□□□ 0.06
TPM1-202ENST00000288398 B3GAT3O94766 335 aa15.43■□□□□ 0.06
TPM1-202ENST00000288398 SRFP11831 508 aa15.43■□□□□ 0.06
TPM1-202ENST00000288398 AOC1P19801 751 aa15.43■□□□□ 0.06
TPM1-202ENST00000288398 PEX3P56589 373 aa15.43■□□□□ 0.06
TPM1-202ENST00000288398 NBR1Q14596 966 aa15.43■□□□□ 0.06
TPM1-202ENST00000288398 ZRSR1Q15695 479 aaKnown RBP15.43■□□□□ 0.06
TPM1-202ENST00000288398 ZNF568Q3ZCX4 644 aa15.43■□□□□ 0.06
TPM1-202ENST00000288398 GLRA4Q5JXX5 417 aa15.43■□□□□ 0.06
TPM1-202ENST00000288398 EEF1DP3Q658K8 133 aa15.43■□□□□ 0.06
TPM1-202ENST00000288398 RSAD2Q8WXG1 361 aa15.43■□□□□ 0.06
TPM1-202ENST00000288398 MYADMQ96S97 322 aa15.43■□□□□ 0.06
TPM1-202ENST00000288398 MRPL4Q9BYD3 311 aaKnown RBP15.43■□□□□ 0.06
TPM1-202ENST00000288398 POLD4Q9HCU8 107 aa15.43■□□□□ 0.06
TPM1-202ENST00000288398 SLC38A7Q9NVC3 462 aa15.43■□□□□ 0.06
TPM1-202ENST00000288398 WNT16Q9UBV4 365 aa15.43■□□□□ 0.06
TPM1-202ENST00000288398 FBXW11Q9UKB1 542 aa15.43■□□□□ 0.06
TPM1-202ENST00000288398 USP20Q9Y2K6 914 aa15.43■□□□□ 0.06
TPM1-202ENST00000288398 MYO10Q9HD67 2058 aa15.43■□□□□ 0.06
TPM1-202ENST00000288398 PLXNA3P51805 1871 aa15.42■□□□□ 0.06
TPM1-202ENST00000288398 NARSO43776 548 aaKnown RBP15.42■□□□□ 0.06
TPM1-202ENST00000288398 N4BP1O75113 896 aaKnown RBP15.42■□□□□ 0.06
TPM1-202ENST00000288398 C8AP07357 584 aa15.42■□□□□ 0.06
TPM1-202ENST00000288398 LAMP2P13473 410 aa15.42■□□□□ 0.06
TPM1-202ENST00000288398 STRN3Q13033 797 aa15.42■□□□□ 0.06
TPM1-202ENST00000288398 LILRA6Q6PI73 481 aa15.42■□□□□ 0.06
TPM1-202ENST00000288398 DCLRE1AQ6PJP8 1040 aa15.42■□□□□ 0.06
TPM1-202ENST00000288398 SLC44A3Q8N4M1 653 aa15.42■□□□□ 0.06
TPM1-202ENST00000288398 LNX1Q8TBB1 728 aaPredicted RBP15.42■□□□□ 0.06
TPM1-202ENST00000288398 CDK5RAP3Q96JB5 506 aa15.42■□□□□ 0.06
TPM1-202ENST00000288398 KMT5AQ9NQR1 393 aa15.42■□□□□ 0.06
TPM1-202ENST00000288398 KCNG1Q9UIX4 513 aa15.42■□□□□ 0.06
TPM1-202ENST00000288398 CA14Q9ULX7 337 aa15.42■□□□□ 0.06
TPM1-202ENST00000288398 TNFSF13BQ9Y275 285 aa15.42■□□□□ 0.06
TPM1-202ENST00000288398 RBM19Q9Y4C8 960 aaKnown RBP15.42■□□□□ 0.06
TPM1-202ENST00000288398 C2orf16Q68DN1 1984 aa15.42■□□□□ 0.06
TPM1-202ENST00000288398 H3BQV1 296 aa15.41■□□□□ 0.06
TPM1-202ENST00000288398 CCL16O15467 120 aa15.41■□□□□ 0.06
TPM1-202ENST00000288398 HIP1RO75146 1068 aa15.41■□□□□ 0.06
TPM1-202ENST00000288398 CENPBP07199 599 aaPredicted RBP15.41■□□□□ 0.06
TPM1-202ENST00000288398 U2AF2P26368 475 aaKnown RBP eCLIP15.41■□□□□ 0.064e-8■■■■■ 38.8
TPM1-202ENST00000288398 OSTNP61366 133 aa15.41■□□□□ 0.06
TPM1-202ENST00000288398 NT5DC1Q5TFE4 455 aa15.41■□□□□ 0.06
TPM1-202ENST00000288398 CWF19L1Q69YN2 538 aaKnown RBP15.41■□□□□ 0.06
TPM1-202ENST00000288398 ANKS3Q6ZW76 656 aa15.41■□□□□ 0.06
TPM1-202ENST00000288398 GRASPQ7Z6J2 395 aaPredicted RBP15.41■□□□□ 0.06
TPM1-202ENST00000288398 IGSF22Q8N9C0 903 aa15.41■□□□□ 0.06
TPM1-202ENST00000288398 SLC7A14Q8TBB6 771 aa15.41■□□□□ 0.06
TPM1-202ENST00000288398 DDX27Q96GQ7 796 aaKnown RBP15.41■□□□□ 0.06
TPM1-202ENST00000288398 CLSTN3Q9BQT9 956 aa15.41■□□□□ 0.06
TPM1-202ENST00000288398 TIPINQ9BVW5 301 aa15.41■□□□□ 0.06
TPM1-202ENST00000288398 UPF2Q9HAU5 1272 aaKnown RBP15.41■□□□□ 0.06
TPM1-202ENST00000288398 PCDHB6Q9Y5E3 794 aa15.41■□□□□ 0.06
TPM1-202ENST00000288398 E9PMD0 336 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 TMEM189-UBE2V1I3L0A0 370 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 HARSP12081 509 aaKnown RBP15.4■□□□□ 0.06
TPM1-202ENST00000288398 HOXA9P31269 272 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 ELF1P32519 619 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 OR1D2P34982 312 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 PRPHP41219 470 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 GRM5P41594 1212 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 MATR3P43243 847 aaKnown RBP eCLIP15.4■□□□□ 0.06
TPM1-202ENST00000288398 NPTX2P47972 431 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 CLCNKBP51801 687 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 SMTNP53814 917 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 ECM1Q16610 540 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 RILPL1Q5EBL4 403 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 AXDND1Q5T1B0 1012 aaPredicted RBP15.4■□□□□ 0.06
TPM1-202ENST00000288398 MTSS1LQ765P7 747 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 CCDC105Q8IYK2 499 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 C4orf32Q8N8J7 132 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 DTWD2Q8NBA8 298 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 NKD2Q969F2 451 aaPredicted RBP15.4■□□□□ 0.06
TPM1-202ENST00000288398 ACAP3Q96P50 834 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 TMEM134Q9H6X4 195 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 C17orf75Q9HAS0 396 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 CDH7Q9ULB5 785 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 NUB1Q9Y5A7 615 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 NUMBLQ9Y6R0 609 aa15.4■□□□□ 0.06
TPM1-202ENST00000288398 SMIM28A0A1B0GU29 152 aa15.39■□□□□ 0.05
TPM1-202ENST00000288398 PAPLNO95428 1278 aa15.39■□□□□ 0.05
TPM1-202ENST00000288398 EDN1P05305 212 aa15.39■□□□□ 0.05
TPM1-202ENST00000288398 MCF2P10911 925 aa15.39■□□□□ 0.05
TPM1-202ENST00000288398 FGFR3P22607 806 aa15.39■□□□□ 0.05
TPM1-202ENST00000288398 NBL1P41271 181 aa15.39■□□□□ 0.05
TPM1-202ENST00000288398 RAB33AQ14088 237 aa15.39■□□□□ 0.05
TPM1-202ENST00000288398 RABEP1Q15276 862 aa15.39■□□□□ 0.05
TPM1-202ENST00000288398 UVSSAQ2YD98 709 aa15.39■□□□□ 0.05
TPM1-202ENST00000288398 RTL10Q7L3V2 364 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms