RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 GPR52Q9Y2T5 361 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 IKBKGQ9Y6K9 419 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 CCNB3Q8WWL7 1395 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 PLEKHG2Q9H7P9 1386 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 A0A1W2PPH5 198 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 COBLO75128 1261 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 MTA2O94776 668 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 MAP2K6P52564 334 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 ZBTB16Q05516 673 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 KHDC1LQ5JSQ8 128 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 FAM205BPQ63HN1 556 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 ZNF449Q6P9G9 518 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 ZNF598Q86UK7 904 aaKnown RBP3.04□□□□□ -1.92
CHD1-201ENST00000284049 TMEM57Q8N5G2 664 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 DPF2Q92785 391 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 ASIC4Q96FT7 647 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 MAELQ96JY0 434 aaKnown RBP3.04□□□□□ -1.92
CHD1-201ENST00000284049 EIF2AQ9BY44 585 aaKnown RBP3.04□□□□□ -1.92
CHD1-201ENST00000284049 PDGFDQ9GZP0 370 aaPredicted RBP3.04□□□□□ -1.92
CHD1-201ENST00000284049 SH2D4AQ9H788 454 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 EPB41L4AQ9HCS5 686 aaPredicted RBP3.04□□□□□ -1.92
CHD1-201ENST00000284049 TAB2Q9NYJ8 693 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 HCSTQ9UBK5 93 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 GDF2Q9UK05 429 aaPredicted RBP3.04□□□□□ -1.92
CHD1-201ENST00000284049 DENND2AQ9ULE3 1009 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 AGTPBP1Q9UPW5 1226 aa3.04□□□□□ -1.92
CHD1-201ENST00000284049 UBA6A0AVT1 1052 aaPredicted RBP3.03□□□□□ -1.92
CHD1-201ENST00000284049 TAF4O00268 1085 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 PEX12O00623 359 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 AURKAO14965 403 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 PCDHGA12O60330 932 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 PPFIA2O75334 1257 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 USP1O94782 785 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 DDX58O95786 925 aaKnown RBP3.03□□□□□ -1.92
CHD1-201ENST00000284049 ADSLP30566 484 aaPredicted RBP3.03□□□□□ -1.92
CHD1-201ENST00000284049 PRKAG1P54619 331 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 MGAT5Q09328 741 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 PTK2BQ14289 1009 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 NTRK3Q16288 839 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 IFI16Q16666 785 aaKnown RBP3.03□□□□□ -1.92
CHD1-201ENST00000284049 TUBB8Q3ZCM7 444 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 CCDC184Q52MB2 194 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 BMP2KLQ5H9B9 411 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 HTRA1Q92743 480 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 PHKBQ93100 1093 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 DBNDD2Q9BQY9 259 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 MXD3Q9BW11 206 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 NOD2Q9HC29 1040 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 TOR4AQ9NXH8 423 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 NKIRAS2Q9NYR9 191 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 PCDHGA9Q9Y5G4 932 aaKnown RBP3.03□□□□□ -1.92
CHD1-201ENST00000284049 PCDHGA7Q9Y5G6 932 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 PCDHGA6Q9Y5G7 932 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 PCDHGA3Q9Y5H0 932 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 CAMSAP1Q5T5Y3 1602 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 SPHKAPQ2M3C7 1700 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 hCG_1807616A0A1W2PRN6 198 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 RGS10O43665 173 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 MSCO60682 206 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 FGFR3P22607 806 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 RXRGP48443 463 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 NRG1Q02297 640 aaPredicted RBP3.03□□□□□ -1.92
CHD1-201ENST00000284049 PFKFB4Q16877 469 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 SLC22A25Q6T423 547 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 GALNT15Q8N3T1 639 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 ATP11CQ8NB49 1132 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 FANCBQ8NB91 859 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 GSDMBQ8TAX9 411 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 GAB3Q8WWW8 586 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 NANOS1Q8WY41 292 aaKnown RBP3.03□□□□□ -1.92
CHD1-201ENST00000284049 CENPIQ92674 756 aaPredicted RBP3.03□□□□□ -1.92
CHD1-201ENST00000284049 ELF4Q99607 663 aaPredicted RBP3.03□□□□□ -1.92
CHD1-201ENST00000284049 CCDC177Q9NQR7 707 aaPredicted RBP3.03□□□□□ -1.92
CHD1-201ENST00000284049 ADGRL1O94910 1474 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 A2MP01023 1474 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 B4E171 279 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 INMTO95050 263 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 ECEL1O95672 775 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 HRGP04196 525 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 ZSCAN22P10073 491 aaPredicted RBP3.03□□□□□ -1.92
CHD1-201ENST00000284049 GLB1P16278 677 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 TACR1P25103 407 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 TSPAN7P41732 249 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 BCAT1P54687 386 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 DAG1Q14118 895 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 INF2Q27J81 1249 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 KIF4BQ2VIQ3 1234 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 ZNF569Q5MCW4 686 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 SLFN12LQ6IEE8 588 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 NAA16Q6N069 864 aaPredicted RBP3.03□□□□□ -1.92
CHD1-201ENST00000284049 AOPEPQ8N6M6 819 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 CTCFLQ8NI51 663 aaPredicted RBP3.03□□□□□ -1.92
CHD1-201ENST00000284049 FEM1CQ96JP0 617 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 ZFP42Q96MM3 310 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 CHODLQ9H9P2 273 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 ZCCHC17Q9NP64 241 aaKnown RBP3.03□□□□□ -1.92
CHD1-201ENST00000284049 SMYD2Q9NRG4 433 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 DISC1Q9NRI5 854 aa3.03□□□□□ -1.92
CHD1-201ENST00000284049 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.03□□□□□ -1.92
CHD1-201ENST00000284049 LIMA1Q9UHB6 759 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms