RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 SNUPNO95149 360 aaKnown RBP3.18□□□□□ -1.9
HERC4-201ENST00000277817 CRTAMO95727 393 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 HOXB7P09629 217 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 ZNF853P0CG23 659 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 ESRRAP11474 423 aaPredicted RBP3.18□□□□□ -1.9
HERC4-201ENST00000277817 ITGA6P23229 1130 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 PIK3CAP42336 1068 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 PNLIPRP1P54315 467 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 C1QTNF8P60827 252 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 PROSER3Q2NL68 480 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 PIK3R6Q5UE93 754 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 NAA16Q6N069 864 aaPredicted RBP3.18□□□□□ -1.9
HERC4-201ENST00000277817 ABRAXAS1Q6UWZ7 409 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 USP45Q70EL2 814 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 NXPE1Q8N323 547 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 NAT8LQ8N9F0 302 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 TMEM145Q8NBT3 493 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 C1GALT1C1Q96EU7 318 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 TMEM169Q96HH4 297 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 UTP14AQ9BVJ6 771 aaKnown RBP3.18□□□□□ -1.9
HERC4-201ENST00000277817 TSPYL1Q9H0U9 437 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 TRIT1Q9H3H1 467 aaKnown RBP3.18□□□□□ -1.9
HERC4-201ENST00000277817 CYP26B1Q9NR63 512 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 OXSMQ9NWU1 459 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 WASF3Q9UPY6 502 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 COL15A1P39059 1388 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 A0A0D9SFI3 127 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 hCG_1642624A0A1W2PR95 340 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 PRAMEF22A3QJZ6 481 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 GOLGA6L10A6NI86 522 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 TAF5LO75529 589 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 TRPA1O75762 1119 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 BAG3O95817 575 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 MATR3P43243 847 aaKnown RBP eCLIP3.18□□□□□ -1.99e-6■■■■□ 23
HERC4-201ENST00000277817 DSC2Q02487 901 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 ADCK5Q3MIX3 580 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 FAM26FQ5R3K3 315 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 CCDC62Q6P9F0 684 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 MAATS1Q7Z4T9 603 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 MYCT1Q8N699 235 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 EFHBQ8N7U6 833 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 KBTBD3Q8NAB2 608 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 CCDC150Q8NCX0 1101 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 DPF3Q92784 378 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 NLRP3Q96P20 1036 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 DMRTA2Q96SC8 542 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 CRACR2AQ9BSW2 395 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.18□□□□□ -1.9
HERC4-201ENST00000277817 DDX23Q9BUQ8 820 aaKnown RBP3.18□□□□□ -1.9
HERC4-201ENST00000277817 CRNKL1Q9BZJ0 848 aaKnown RBP3.18□□□□□ -1.9
HERC4-201ENST00000277817 MAGEH1Q9H213 219 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 CLEC4MQ9H2X3 399 aaPredicted RBP3.18□□□□□ -1.9
HERC4-201ENST00000277817 GHITMQ9H3K2 345 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 ZMAT4Q9H898 229 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 CABP5Q9NP86 173 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 C14orf119Q9NWQ9 140 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 GREB1LQ9C091 1923 aaPredicted RBP3.18□□□□□ -1.9
HERC4-201ENST00000277817 AOX1Q06278 1338 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 NEURL1BA8MQ27 555 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 F8W031 263 aaPredicted RBP3.18□□□□□ -1.9
HERC4-201ENST00000277817 H7C0S8 307 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 CTNND1O60716 968 aaKnown RBP3.18□□□□□ -1.9
HERC4-201ENST00000277817 PRDM1O75626 825 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 MBD4O95243 580 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 MYBL2P10244 700 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 BCRP11274 1271 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 BTF3P20290 206 aaKnown RBP3.18□□□□□ -1.9
HERC4-201ENST00000277817 TNFSF4P23510 183 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 RFC4P35249 363 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 SEPT2Q15019 361 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 SLC35G1Q2M3R5 365 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 FSTL4Q6MZW2 842 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 NPNTQ6UXI9 565 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 SYT10Q6XYQ8 523 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 RTKN2Q8IZC4 609 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 Q8N1Y9 231 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.18□□□□□ -1.92e-10■■■■■ 28.1
HERC4-201ENST00000277817 RNF217Q8TC41 542 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 TAF4BQ92750 862 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 HHIPL1Q96JK4 782 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 PLIN2Q99541 437 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 MYL10Q9BUA6 226 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 PBX4Q9BYU1 374 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 RAB34Q9BZG1 259 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 DPH1Q9BZG8 443 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 CBX8Q9HC52 389 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 NFKBIL1Q9UBC1 381 aaPredicted RBP3.18□□□□□ -1.9
HERC4-201ENST00000277817 SLC13A4Q9UKG4 626 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 BLACEA4D250 179 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 SYT5O00445 386 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 SPINT1O43278 529 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 GPAA1O43292 621 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 ERLIN2O94905 339 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 GSNP06396 782 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 CTSBP07858 339 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 TSPY3P0CV98 308 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 TSPY8P0CW00 308 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 MSX1P28360 303 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 HOXD13P35453 343 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 COPS2P61201 443 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms