RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 GAKO14976 1311 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 PLSCR1O15162 318 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 CDK4P11802 303 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 PLCG2P16885 1265 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 PTPN4P29074 926 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 TXKP42681 527 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 PTK2Q05397 1052 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 MOGSQ13724 837 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 BTNL9Q6UXG8 535 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 GLIS3Q8NEA6 775 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 HSPBAP1Q96EW2 488 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 TMEM109Q9BVC6 243 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 TRIM9Q9C026 710 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 TMEM60Q9H2L4 133 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 TLE6Q9H808 572 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 TCP11L1Q9NUJ3 509 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.75■□□□□ 0.271e-8■■■■■ 33.1
CTDSP1-201ENST00000273062 TBK1Q9UHD2 729 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 STXBP5LQ9Y2K9 1186 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 ADAMTSL1Q8N6G6 1762 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 TRAFD1O14545 582 aaPredicted RBP16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 ASMTLO95671 621 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 APBA3O96018 575 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 MMP10P09238 476 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 HARSP12081 509 aaKnown RBP16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 CD97P48960 835 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 R3HDM1Q15032 1099 aaKnown RBP16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 PDCD7Q8N8D1 485 aaKnown RBP16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 MAGEB18Q96M61 343 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 CATSPER2Q96P56 530 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 MIS12Q9H081 205 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 STMN4Q9H169 189 aaPredicted RBP16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 VAT1LQ9HCJ6 419 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 CEP72Q9P209 647 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 PCDHA4Q9UN74 947 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 TMEM110-MUSTN1A8MSY1 372 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 KLRF2D3W0D1 207 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 EXOC3O60645 756 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 AMPD1P23109 780 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 LONP1P36776 959 aaKnown RBP16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 RASSF2P50749 326 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 CCDC92Q53HC0 331 aaPredicted RBP16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 TMEM53Q6P2H8 277 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 ISLR2Q6UXK2 745 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 ZNF571Q7Z3V5 609 aaPredicted RBP16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 NT5DC3Q86UY8 548 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 STX18Q9P2W9 335 aaKnown RBP16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 PCDHAC2Q9Y5I4 1007 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 LRRC37AA6NMS7 1700 aa16.74■□□□□ 0.27
CTDSP1-201ENST00000273062 TMEM247A6NEH6 219 aa16.73■□□□□ 0.27
CTDSP1-201ENST00000273062 TRIM50Q86XT4 487 aa16.73■□□□□ 0.27
CTDSP1-201ENST00000273062 AKT1S1Q96B36 256 aa16.73■□□□□ 0.27
CTDSP1-201ENST00000273062 ABHD8Q96I13 439 aa16.73■□□□□ 0.27
CTDSP1-201ENST00000273062 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.73■□□□□ 0.279e-9■■■■■ 111.8
CTDSP1-201ENST00000273062 DNAJC17Q9NVM6 304 aaKnown RBP16.73■□□□□ 0.27
CTDSP1-201ENST00000273062 ZNF219Q9P2Y4 722 aaPredicted RBP16.73■□□□□ 0.27
CTDSP1-201ENST00000273062 ARMCX3Q9UH62 379 aaPredicted RBP16.73■□□□□ 0.27
CTDSP1-201ENST00000273062 PCDHA6Q9UN73 950 aa16.73■□□□□ 0.27
CTDSP1-201ENST00000273062 PCDHA8Q9Y5H6 950 aa16.73■□□□□ 0.27
CTDSP1-201ENST00000273062 MAPK13O15264 365 aa16.73■□□□□ 0.27
CTDSP1-201ENST00000273062 ZNF862O60290 1169 aa16.73■□□□□ 0.27
CTDSP1-201ENST00000273062 OPHN1O60890 802 aa16.73■□□□□ 0.27
CTDSP1-201ENST00000273062 POTEJP0CG39 1038 aa16.73■□□□□ 0.27
CTDSP1-201ENST00000273062 CETPP11597 493 aa16.73■□□□□ 0.27
CTDSP1-201ENST00000273062 PLCG1P19174 1290 aa16.73■□□□□ 0.27
CTDSP1-201ENST00000273062 CENPPQ6IPU0 288 aa16.73■□□□□ 0.27
CTDSP1-201ENST00000273062 EBF3Q9H4W6 596 aa16.73■□□□□ 0.27
CTDSP1-201ENST00000273062 LARSQ9P2J5 1176 aaKnown RBP16.73■□□□□ 0.27
CTDSP1-201ENST00000273062 FRMPD2Q68DX3 1309 aaPredicted RBP16.73■□□□□ 0.27
CTDSP1-201ENST00000273062 USP17L5A8MUK1 530 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 M0R2N6 131 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 USP1O94782 785 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 PGM3O95394 542 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 VPS41P49754 854 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 WDR4P57081 412 aaKnown RBP16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 KLC3Q6P597 504 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 LRRC55Q6ZSA7 311 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 TRIM67Q6ZTA4 783 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 TREML1Q86YW5 311 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 LRRC47Q8N1G4 583 aaKnown RBP16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 NEDD1Q8NHV4 660 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 GAB3Q8WWW8 586 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 UBA5Q9GZZ9 404 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 PHTF1Q9UMS5 762 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 UMODL1Q5DID0 1318 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 PITPNM2Q9BZ72 1349 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 COL6A2P12110 1019 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 KRT13P13646 458 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 MKRN3Q13064 507 aaKnown RBP16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 MAPK7Q13164 816 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 THOC5Q13769 683 aaKnown RBP16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 CTC1Q2NKJ3 1217 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 SAPCD2Q86UD0 394 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 SRRM1Q8IYB3 904 aaKnown RBP16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 AGAP3Q96P47 875 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 OLFM3Q96PB7 478 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 ZC3H12CQ9C0D7 883 aaKnown RBP16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 DBNDD1Q9H9R9 158 aa16.72■□□□□ 0.27
CTDSP1-201ENST00000273062 METTL14Q9HCE5 456 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms