RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 C18orf8Q96DM3 657 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 ADPGKQ9BRR6 497 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 GABBR1Q9UBS5 961 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 FEM1BQ9UK73 627 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 ZNF711Q9Y462 761 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 RCCD1A6NED2 376 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 FAM47DPA6NHR8 397 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 GIPC1O14908 333 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 ANXA13P27216 316 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 CASP4P49662 377 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 EVX2Q03828 476 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 NFIAQ12857 509 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 CDO1Q16878 200 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 CNPY4Q8N129 248 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 FBXL13Q8NEE6 735 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 NUDT12Q9BQG2 462 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 SCINQ9Y6U3 715 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 TNS2Q63HR2 1409 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 ARSEP51690 589 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 KRT76Q01546 638 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 LMBRD2Q68DH5 695 aaPredicted RBP12.25□□□□□ -0.45
VPS33A-201ENST00000267199 RINT1Q6NUQ1 792 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 GADL1Q6ZQY3 521 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 ERICH1Q86X53 443 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 TMEM139Q8IV31 216 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 HSPH1Q92598 858 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 MRPL46Q9H2W6 279 aaKnown RBP12.25□□□□□ -0.45
VPS33A-201ENST00000267199 RNF225M0QZC1 329 aaPredicted RBP12.25□□□□□ -0.45
VPS33A-201ENST00000267199 HNRNPCP07910 306 aaKnown RBP eCLIP12.25□□□□□ -0.45
VPS33A-201ENST00000267199 THNSL1Q8IYQ7 743 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 ANKRD36BP1Q96IX9 119 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 FAM129AQ9BZQ8 928 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 ZNF408Q9H9D4 720 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 OSGEPQ9NPF4 335 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 PCSK1NQ9UHG2 260 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 OPLAHO14841 1288 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 PPP1R12AO14974 1030 aaPredicted RBP12.24□□□□□ -0.45
VPS33A-201ENST00000267199 GSTA1P08263 222 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 GSTA2P09210 222 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 ZNF844Q08AG5 666 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 OVGP1Q12889 678 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 ART3Q13508 389 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 STAT4Q14765 748 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 HHIPL2Q6UWX4 724 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 TRMT10CQ7L0Y3 403 aaKnown RBP12.24□□□□□ -0.45
VPS33A-201ENST00000267199 SCFD1Q8WVM8 642 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 FAF2Q96CS3 445 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 RIOX1Q9H6W3 641 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 HERC5Q9UII4 1024 aaKnown RBP12.24□□□□□ -0.45
VPS33A-201ENST00000267199 APOBEC2Q9Y235 224 aaKnown RBP12.24□□□□□ -0.45
VPS33A-201ENST00000267199 PABPN1LA6NDY0 278 aaKnown RBP12.24□□□□□ -0.45
VPS33A-201ENST00000267199 F5H423 210 aaPredicted RBP12.24□□□□□ -0.45
VPS33A-201ENST00000267199 TLR3O15455 904 aaKnown RBP12.24□□□□□ -0.45
VPS33A-201ENST00000267199 RTN2O75298 545 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 FSBPO95073 299 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 PSMC5P62195 406 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 MRPS35P82673 323 aaKnown RBP12.24□□□□□ -0.45
VPS33A-201ENST00000267199 PPP1R2P3Q6NXS1 205 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 CCNYQ8ND76 341 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 SPDYE1Q8NFV5 336 aaPredicted RBP12.24□□□□□ -0.45
VPS33A-201ENST00000267199 PNMA5Q96PV4 448 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 MIS12Q9H081 205 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 RNF146Q9NTX7 359 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 HSPBP1Q9NZL4 362 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 SPATA31A5Q5VU36 1347 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 SPATA31A7Q8IWB4 1347 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 KCNMA1Q12791 1236 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 P3H1Q32P28 736 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 SWSAP1Q6NVH7 229 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 AGR3Q8TD06 166 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 TTC25Q96NG3 672 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 THAP2Q9H0W7 228 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 SEMA4AQ9H3S1 761 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 SUCLA2Q9P2R7 463 aaPredicted RBP12.24□□□□□ -0.45
VPS33A-201ENST00000267199 EPS15L1Q9UBC2 864 aa12.24□□□□□ -0.45
VPS33A-201ENST00000267199 ZCCHC18P0CG32 403 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 EEF1B2P24534 225 aaKnown RBP12.23□□□□□ -0.45
VPS33A-201ENST00000267199 PSMA2P25787 234 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 PON1P27169 355 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 MARK3P27448 753 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 SLFN12LQ6IEE8 588 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 RUSC1Q9BVN2 902 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 MSH4O15457 936 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 ZBED1O96006 694 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 TMEM253P0C7T8 217 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 GNAT1P11488 350 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 ITGA8P53708 1063 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 ALDH18A1P54886 795 aaKnown RBP12.23□□□□□ -0.45
VPS33A-201ENST00000267199 SPP2Q13103 211 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 MAPK7Q13164 816 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 ANKRD20A4Q4UJ75 823 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 ANKRD20A2Q5SQ80 823 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 ANKRD20A1Q5TYW2 823 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 RHPN2Q8IUC4 686 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 TTLL6Q8N841 843 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 TMEM35BQ8NCS4 154 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 ATL2Q8NHH9 583 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 DEPDC1BQ8WUY9 529 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 THTPAQ9BU02 230 aa12.23□□□□□ -0.45
VPS33A-201ENST00000267199 ATP6V0A4Q9HBG4 840 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms