RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 ABHD15Q6UXT9 468 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 BANK1Q8NDB2 785 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 SGIP1Q9BQI5 828 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 ELP3Q9H9T3 547 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 CFAP69A5D8W1 941 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 EML1O00423 815 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 SLC12A2P55011 1212 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 KRT81Q14533 505 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 ERCC6LQ2NKX8 1250 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 ZNF365Q70YC5 407 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 CCDC110Q8TBZ0 833 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 PLEKHA5Q9HAU0 1116 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 DOCK2Q92608 1830 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 TUBGCP6Q96RT7 1819 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 FAM170AA1A519 330 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 DHX15O43143 795 aaKnown RBP8.78□□□□□ -1
PTPN3-201ENST00000262539 PPP1R37O75864 691 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 SKIP12755 728 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 VGLL4Q14135 290 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 LDLRAD1Q5T700 205 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 LRRC38Q5VT99 294 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 ARMCX2Q7L311 632 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 TMEM161BQ8NDZ6 487 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 IFT81Q8WYA0 676 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 ZFYVE28Q9HCC9 887 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 RBAKQ9NYW8 714 aaPredicted RBP8.78□□□□□ -1
PTPN3-201ENST00000262539 UTP11Q9Y3A2 253 aaKnown RBP8.78□□□□□ -1
PTPN3-201ENST00000262539 SYNJ2BP-COX16A0A087WUM0 186 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 ERBB2P04626 1255 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 LACTBP83111 547 aaPredicted RBP8.78□□□□□ -1
PTPN3-201ENST00000262539 CDR2Q01850 454 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 ILF2Q12905 390 aaKnown RBP8.78□□□□□ -1
PTPN3-201ENST00000262539 C4orf22Q6V702 233 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 IFNLR1Q8IU57 520 aaPredicted RBP8.78□□□□□ -1
PTPN3-201ENST00000262539 SUGCTQ9HAC7 445 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 ST7Q9NRC1 585 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 COX16Q9P0S2 106 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 A0A087WWV3 80 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 CABYRO75952 493 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 GPC3P51654 580 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 RBP5P82980 135 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 NME8Q8N427 588 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 BAP1Q92560 729 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 SPATA33Q96N06 139 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 P2RX7Q99572 595 aaKnown RBP8.78□□□□□ -1
PTPN3-201ENST00000262539 SYT17Q9BSW7 474 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 RGS17Q9UGC6 210 aaPredicted RBP8.78□□□□□ -1
PTPN3-201ENST00000262539 AKT3Q9Y243 479 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 TNFSF13BQ9Y275 285 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 KRT33BQ14525 404 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 BZW1Q7L1Q6 419 aaKnown RBP8.78□□□□□ -1
PTPN3-201ENST00000262539 NFKBIZQ9BYH8 718 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 POLIQ9UNA4 740 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 ITGB3BPQ13352 177 aaPredicted RBP8.78□□□□□ -1
PTPN3-201ENST00000262539 MFSD14CQ5VZR4 134 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 SCYL2Q6P3W7 929 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 SEPT14Q6ZU15 432 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 TRIM50Q86XT4 487 aa8.78□□□□□ -1
PTPN3-201ENST00000262539 UPF1Q92900 1129 aaKnown RBP eCLIP8.78□□□□□ -1
PTPN3-201ENST00000262539 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.78□□□□□ -1
PTPN3-201ENST00000262539 CLIC2O15247 247 aa8.77□□□□□ -1
PTPN3-201ENST00000262539 TGFB1I1O43294 461 aa8.77□□□□□ -1
PTPN3-201ENST00000262539 KRT7P08729 469 aa8.77□□□□□ -1
PTPN3-201ENST00000262539 PAEPP09466 180 aa8.77□□□□□ -1
PTPN3-201ENST00000262539 KCNA2P16389 499 aa8.77□□□□□ -1
PTPN3-201ENST00000262539 UBA1P22314 1058 aaKnown RBP8.77□□□□□ -1
PTPN3-201ENST00000262539 ACAP1Q15027 740 aa8.77□□□□□ -1
PTPN3-201ENST00000262539 ZACNQ401N2 412 aa8.77□□□□□ -1
PTPN3-201ENST00000262539 TOGARAM2Q6ZUX3 1019 aa8.77□□□□□ -1
PTPN3-201ENST00000262539 METTL23Q86XA0 190 aa8.77□□□□□ -1
PTPN3-201ENST00000262539 HOMEZQ8IX15 550 aa8.77□□□□□ -1
PTPN3-201ENST00000262539 NKX2-3Q8TAU0 364 aa8.77□□□□□ -1
PTPN3-201ENST00000262539 ZFP91Q96JP5 570 aaPredicted RBP8.77□□□□□ -1
PTPN3-201ENST00000262539 PHACTR1Q9C0D0 580 aa8.77□□□□□ -1
PTPN3-201ENST00000262539 TAF1DQ9H5J8 278 aaPredicted RBP8.77□□□□□ -1
PTPN3-201ENST00000262539 DERAQ9Y315 318 aa8.77□□□□□ -1
PTPN3-201ENST00000262539 STYXL1Q9Y6J8 313 aa8.77□□□□□ -1
PTPN3-201ENST00000262539 TOMM70O94826 608 aa8.77□□□□□ -1.01
PTPN3-201ENST00000262539 CD4P01730 458 aa8.77□□□□□ -1.01
PTPN3-201ENST00000262539 PRMT2P55345 433 aa8.77□□□□□ -1.01
PTPN3-201ENST00000262539 CYP27A1Q02318 531 aa8.77□□□□□ -1.01
PTPN3-201ENST00000262539 C17orf53Q8N3J3 647 aaPredicted RBP8.77□□□□□ -1.01
PTPN3-201ENST00000262539 UBLCP1Q8WVY7 318 aaPredicted RBP8.77□□□□□ -1.01
PTPN3-201ENST00000262539 ZKSCAN4Q969J2 545 aaPredicted RBP8.77□□□□□ -1.01
PTPN3-201ENST00000262539 ZNF653Q96CK0 615 aa8.77□□□□□ -1.01
PTPN3-201ENST00000262539 PURBQ96QR8 312 aaKnown RBP8.77□□□□□ -1.01
PTPN3-201ENST00000262539 MED15Q96RN5 788 aa8.77□□□□□ -1.01
PTPN3-201ENST00000262539 TRIM56Q9BRZ2 755 aaKnown RBP8.77□□□□□ -1.01
PTPN3-201ENST00000262539 GANQ9H2C0 597 aa8.77□□□□□ -1.01
PTPN3-201ENST00000262539 UBE2TQ9NPD8 197 aaPredicted RBP8.77□□□□□ -1.01
PTPN3-201ENST00000262539 SLC38A7Q9NVC3 462 aa8.77□□□□□ -1.01
PTPN3-201ENST00000262539 DDX56Q9NY93 547 aaKnown RBP8.77□□□□□ -1.01
PTPN3-201ENST00000262539 ARHGAP20Q9P2F6 1191 aa8.77□□□□□ -1.01
PTPN3-201ENST00000262539 UBQLN1Q9UMX0 589 aaKnown RBP8.77□□□□□ -1.01
PTPN3-201ENST00000262539 MAFBQ9Y5Q3 323 aaPredicted RBP8.77□□□□□ -1.01
PTPN3-201ENST00000262539 GOLGA8KD6RF30 607 aa8.77□□□□□ -1.01
PTPN3-201ENST00000262539 TLR3O15455 904 aaKnown RBP8.77□□□□□ -1.01
PTPN3-201ENST00000262539 WEE2P0C1S8 567 aa8.77□□□□□ -1.01
PTPN3-201ENST00000262539 FNTAP49354 379 aa8.77□□□□□ -1.01
PTPN3-201ENST00000262539 ERVK-24P63145 666 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms