RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 FAF2Q96CS3 445 aa15.93■□□□□ 0.14
UBE4B-201ENST00000253251 MTIF3Q9H2K0 278 aaKnown RBP15.93■□□□□ 0.14
UBE4B-201ENST00000253251 KIAA1257Q9ULG3 409 aa15.93■□□□□ 0.14
UBE4B-201ENST00000253251 UBQLN1Q9UMX0 589 aaKnown RBP15.93■□□□□ 0.14
UBE4B-201ENST00000253251 LRRC37A3O60309 1634 aa15.93■□□□□ 0.14
UBE4B-201ENST00000253251 ROBO3Q96MS0 1386 aa15.93■□□□□ 0.14
UBE4B-201ENST00000253251 CDKAL1Q5VV42 579 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 ITPRIPL1Q6GPH6 555 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 TLK1Q9UKI8 766 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 NFU1Q9UMS0 254 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 CYTH3O43739 400 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 TOM1L1O75674 476 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 PTPRAP18433 802 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 PAMP19021 973 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 BCAR1P56945 870 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 NFRKBQ6P4R8 1299 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 AFG3L2Q9Y4W6 797 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 SNX9Q9Y5X1 595 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 APOEP02649 317 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 VEPH1Q14D04 833 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 ZC3H15Q8WU90 426 aaKnown RBP15.92■□□□□ 0.14
UBE4B-201ENST00000253251 SENP7Q9BQF6 1050 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 NOC2LQ9Y3T9 749 aaKnown RBP15.92■□□□□ 0.14
UBE4B-201ENST00000253251 KRT37O76014 449 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 SEC31AO94979 1220 aaKnown RBP15.92■□□□□ 0.14
UBE4B-201ENST00000253251 RALAP11233 206 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 NPTX2P47972 431 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 SARSP49591 514 aaKnown RBP15.92■□□□□ 0.14
UBE4B-201ENST00000253251 MAP3K21Q5TCX8 1036 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 GLB1LQ6UWU2 654 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 AKT1S1Q96B36 256 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 GLT1D1Q96MS3 346 aa15.92■□□□□ 0.14
UBE4B-201ENST00000253251 BUB1BO60566 1050 aaPredicted RBP15.91■□□□□ 0.14
UBE4B-201ENST00000253251 S100BP04271 92 aaPredicted RBP15.91■□□□□ 0.14
UBE4B-201ENST00000253251 ADORA2BP29275 332 aa15.91■□□□□ 0.14
UBE4B-201ENST00000253251 ZSCAN26Q16670 478 aa15.91■□□□□ 0.14
UBE4B-201ENST00000253251 LMBRD2Q68DH5 695 aaPredicted RBP15.91■□□□□ 0.14
UBE4B-201ENST00000253251 TATDN1Q6P1N9 297 aa15.91■□□□□ 0.14
UBE4B-201ENST00000253251 ATP8B4Q8TF62 1192 aa15.91■□□□□ 0.14
UBE4B-201ENST00000253251 SERPINB6P35237 376 aa15.91■□□□□ 0.14
UBE4B-201ENST00000253251 RWDD4Q6NW29 188 aaKnown RBP15.91■□□□□ 0.14
UBE4B-201ENST00000253251 LRRC71Q8N4P6 559 aa15.91■□□□□ 0.14
UBE4B-201ENST00000253251 DNAJC7Q99615 494 aa15.91■□□□□ 0.14
UBE4B-201ENST00000253251 CYP3A7-CYP3A51PA0A087WV96 503 aa15.91■□□□□ 0.14
UBE4B-201ENST00000253251 CYP3A7P24462 503 aa15.91■□□□□ 0.14
UBE4B-201ENST00000253251 MTF1Q14872 753 aa15.91■□□□□ 0.14
UBE4B-201ENST00000253251 KLHL38Q2WGJ6 581 aa15.91■□□□□ 0.14
UBE4B-201ENST00000253251 ZNF449Q6P9G9 518 aa15.91■□□□□ 0.14
UBE4B-201ENST00000253251 MPZL3Q6UWV2 235 aa15.91■□□□□ 0.14
UBE4B-201ENST00000253251 ZFPM1Q8IX07 1006 aa15.91■□□□□ 0.14
UBE4B-201ENST00000253251 EXOC4Q96A65 974 aa15.91■□□□□ 0.14
UBE4B-201ENST00000253251 TAF1DQ9H5J8 278 aaPredicted RBP15.91■□□□□ 0.14
UBE4B-201ENST00000253251 KLHL8Q9P2G9 620 aaPredicted RBP15.91■□□□□ 0.14
UBE4B-201ENST00000253251 SH3BP5O60239 455 aa15.91■□□□□ 0.14
UBE4B-201ENST00000253251 RPS6KA2Q15349 733 aa15.91■□□□□ 0.14
UBE4B-201ENST00000253251 OTOP1Q7RTM1 612 aa15.91■□□□□ 0.14
UBE4B-201ENST00000253251 PCSK9Q8NBP7 692 aaKnown RBP15.91■□□□□ 0.14
UBE4B-201ENST00000253251 RNF25Q96BH1 459 aaPredicted RBP15.91■□□□□ 0.14
UBE4B-201ENST00000253251 RNPC3Q96LT9 517 aaKnown RBP15.91■□□□□ 0.14
UBE4B-201ENST00000253251 RAB3IPQ96QF0 476 aaPredicted RBP15.91■□□□□ 0.14
UBE4B-201ENST00000253251 SNX24Q9Y343 169 aa15.91■□□□□ 0.14
UBE4B-201ENST00000253251 SPDYE16A6NNV3 312 aaPredicted RBP15.9■□□□□ 0.14
UBE4B-201ENST00000253251 SLC7A5Q01650 507 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 NNTQ13423 1086 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 BTBD8Q5XKL5 378 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 DDX50Q9BQ39 737 aaKnown RBP15.9■□□□□ 0.14
UBE4B-201ENST00000253251 SLIT2O94813 1529 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 USP27XA6NNY8 438 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 AP3B1O00203 1094 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 SRGAP2O75044 1071 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 GRIK5Q16478 980 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 SPATA4Q8NEY3 305 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 RASSF4Q9H2L5 321 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 KCNF1Q9H3M0 494 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 TRAF3IP3Q9Y228 551 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 CYP2C8P10632 490 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 CD44P16070 742 aaKnown RBP15.9■□□□□ 0.14
UBE4B-201ENST00000253251 NLRP11P59045 1033 aaKnown RBP15.9■□□□□ 0.14
UBE4B-201ENST00000253251 TMED2Q15363 201 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 TRIP13Q15645 432 aaPredicted RBP15.9■□□□□ 0.14
UBE4B-201ENST00000253251 RIOX2Q8IUF8 465 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 DCP1BQ8IZD4 617 aaKnown RBP15.9■□□□□ 0.14
UBE4B-201ENST00000253251 SLC35G2Q8TBE7 412 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 ZNF507Q8TCN5 953 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 CDCA5Q96FF9 252 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 MTMR9Q96QG7 549 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 MAGEB5Q9BZ81 275 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 FRMPD4Q14CM0 1322 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 ATP1A1P05023 1023 aaKnown RBP15.9■□□□□ 0.14
UBE4B-201ENST00000253251 INHBEP58166 350 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 HEATR6Q6AI08 1181 aaKnown RBP15.9■□□□□ 0.14
UBE4B-201ENST00000253251 FBXO38Q6PIJ6 1188 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 RAPH1Q70E73 1250 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 TRIM59Q8IWR1 403 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 VPS39Q96JC1 886 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 HEMGNQ9BXL5 484 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 FOXP3Q9BZS1 431 aa15.9■□□□□ 0.14
UBE4B-201ENST00000253251 ALDH5A1P51649 535 aaPredicted RBP15.89■□□□□ 0.13
UBE4B-201ENST00000253251 FKBP1BP68106 108 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 RAD9BQ6WBX8 426 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms