RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 EIF3CLB5ME19 914 aaKnown RBP14.31□□□□□ -0.12
SLIRP-201ENST00000238688 H3BRB1 525 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 EXTL3O43909 919 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 ZC3H11AO75152 810 aaKnown RBP eCLIP14.31□□□□□ -0.12
SLIRP-201ENST00000238688 NDUFA10O95299 355 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 CASP4P49662 377 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 LIG4P49917 911 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 VAMP7P51809 220 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 AP3M2P53677 418 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 ETF1P62495 437 aaKnown RBP14.31□□□□□ -0.12
SLIRP-201ENST00000238688 ADAM17P78536 824 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 KCNMA1Q12791 1236 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 TUBB2AQ13885 445 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 SURF1Q15526 300 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 SNRNP35Q16560 246 aaKnown RBP14.31□□□□□ -0.12
SLIRP-201ENST00000238688 FAM187BQ17R55 369 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 DCAF17Q5H9S7 520 aaPredicted RBP14.31□□□□□ -0.12
SLIRP-201ENST00000238688 C10orf76Q5T2E6 689 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 ZNF618Q5T7W0 954 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 SERINC5Q86VE9 423 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 KIF18AQ8NI77 898 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 POMGNT1Q8WZA1 660 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 BAP1Q92560 729 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 BICD1Q96G01 975 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 EIF3CQ99613 913 aaKnown RBP14.31□□□□□ -0.12
SLIRP-201ENST00000238688 TUBB2BQ9BVA1 445 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 MRPL4Q9BYD3 311 aaKnown RBP14.31□□□□□ -0.12
SLIRP-201ENST00000238688 OSBPL7Q9BZF2 842 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 TSGA10Q9BZW7 698 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 GANQ9H2C0 597 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 RNPEPQ9H4A4 650 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 TUT1Q9H6E5 874 aaKnown RBP14.31□□□□□ -0.12
SLIRP-201ENST00000238688 GCNT4Q9P109 453 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 EPN1Q9Y6I3 576 aaPredicted RBP14.31□□□□□ -0.12
SLIRP-201ENST00000238688 BRWD1Q9NSI6 2320 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 NCOR1O75376 2440 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 TRANK1O15050 2925 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 LRRIQ4A6NIV6 560 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 ZNF233A6NK53 670 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 LCA5LO95447 670 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 SERPING1P05155 500 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 SMIM10L2AP0DMW4 78 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 SMIM10L2BP0DMW5 78 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 ACTN1P12814 892 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 TNNT1P13805 278 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 UCHL3P15374 230 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 PON1P27169 355 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 CLDN10P78369 228 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 MYL7Q01449 175 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 MKRN4PQ13434 485 aaPredicted RBP14.3□□□□□ -0.12
SLIRP-201ENST00000238688 MAPK6Q16659 721 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 KLHDC7AQ5VTJ3 777 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 SFMBT2Q5VUG0 894 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 WDR59Q6PJI9 974 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 TRIM50Q86XT4 487 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 CCDC155Q8N6L0 562 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 PHOSPHO2Q8TCD6 241 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 CCDC42Q96M95 316 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 SLC9A7Q96T83 725 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 LSM14BQ9BX40 385 aaKnown RBP14.3□□□□□ -0.12
SLIRP-201ENST00000238688 COL25A1Q9BXS0 654 aaPredicted RBP14.3□□□□□ -0.12
SLIRP-201ENST00000238688 HAUS4Q9H6D7 363 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 SLC28A3Q9HAS3 691 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 PRDM6Q9NQX0 595 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 AGPAT5Q9NUQ2 364 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 COQ4Q9Y3A0 265 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 REV3LO60673 3130 aa14.3□□□□□ -0.12
SLIRP-201ENST00000238688 SPTBN5Q9NRC6 3674 aaKnown RBP14.29□□□□□ -0.12
SLIRP-201ENST00000238688 TREHO43280 583 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 TOM1L1O75674 476 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 BAIAP3O94812 1187 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 NOL4O94818 638 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 C22orf31O95567 290 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 ADSSP30520 456 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 PRKCIP41743 596 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 PHKA2P46019 1235 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 WDR5P61964 334 aaKnown RBP14.29□□□□□ -0.12
SLIRP-201ENST00000238688 DEFB103AP81534 67 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 LAMTOR4Q0VGL1 99 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 CAPSQ13938 189 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 SPA17Q15506 151 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 TRIM65Q6PJ69 517 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 RRAGAQ7L523 313 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 ENOSF1Q7L5Y1 443 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 APBB1IPQ7Z5R6 666 aaPredicted RBP14.29□□□□□ -0.12
SLIRP-201ENST00000238688 SPRED2Q7Z698 418 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 TMCO2Q7Z6W1 182 aaPredicted RBP14.29□□□□□ -0.12
SLIRP-201ENST00000238688 ZNF410Q86VK4 478 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 VPS36Q86VN1 386 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 HERC6Q8IVU3 1022 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 REXO1L1PQ8IX06 675 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 LINC01465Q8N7H1 131 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 ASAP3Q8TDY4 903 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 PRPF31Q8WWY3 499 aaKnown RBP14.29□□□□□ -0.12
SLIRP-201ENST00000238688 TMEM143Q96AN5 459 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 C16orf45Q96MC5 204 aaPredicted RBP14.29□□□□□ -0.12
SLIRP-201ENST00000238688 SPAG5Q96R06 1193 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 CBWD1Q9BRT8 395 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 CCDC113Q9H0I3 377 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 TMEM8AQ9HCN3 771 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms