RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 DNAI1Q9UI46 699 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 TFR2Q9UP52 801 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 A0A087X0T9 212 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 C17orf102A2RUQ5 167 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 FOXN3O00409 490 aaPredicted RBP16.45■□□□□ 0.22
HDHD3-201ENST00000238379 EVI5O60447 810 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 TSPAN1O60635 241 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 FAM228BP0C875 321 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 VAV2P52735 878 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 TMEM62Q0P6H9 643 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 SLC18A3Q16572 532 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 CXCL17Q6UXB2 119 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 KIAA1328Q86T90 577 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 THNSL1Q8IYQ7 743 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 C7orf31Q8N865 590 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 HELQQ8TDG4 1101 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 DNAJB3Q8WWF6 145 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 KAT5Q92993 513 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 VTI1AQ96AJ9 217 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 KREMEN1Q96MU8 473 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 LACRTQ9GZZ8 138 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 CDHR5Q9HBB8 845 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 SPC25Q9HBM1 224 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 TRIM10Q9UDY6 481 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 PCDHA13Q9Y5I0 950 aa16.45■□□□□ 0.22
HDHD3-201ENST00000238379 VNN1O95497 513 aa16.44■□□□□ 0.22
HDHD3-201ENST00000238379 MCF2P10911 925 aa16.44■□□□□ 0.22
HDHD3-201ENST00000238379 MAP3K21Q5TCX8 1036 aa16.44■□□□□ 0.22
HDHD3-201ENST00000238379 FMNL3Q8IVF7 1028 aa16.44■□□□□ 0.22
HDHD3-201ENST00000238379 OR5B17Q8NGF7 314 aa16.44■□□□□ 0.22
HDHD3-201ENST00000238379 JAKMIP2Q96AA8 810 aa16.44■□□□□ 0.22
HDHD3-201ENST00000238379 CPB2Q96IY4 423 aa16.44■□□□□ 0.22
HDHD3-201ENST00000238379 NT5C1BQ96P26 610 aa16.44■□□□□ 0.22
HDHD3-201ENST00000238379 IFIH1Q9BYX4 1025 aaKnown RBP16.44■□□□□ 0.22
HDHD3-201ENST00000238379 GCOM2Q9BZD3 368 aaPredicted RBP16.44■□□□□ 0.22
HDHD3-201ENST00000238379 XPNPEP3Q9NQH7 507 aa16.44■□□□□ 0.22
HDHD3-201ENST00000238379 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.44■□□□□ 0.222e-6■■■■■ 149.1
HDHD3-201ENST00000238379 ADAMTS1Q9UHI8 967 aa16.44■□□□□ 0.22
HDHD3-201ENST00000238379 A0A1B0GUA9 196 aa16.43■□□□□ 0.22
HDHD3-201ENST00000238379 KIF5CO60282 957 aa16.43■□□□□ 0.22
HDHD3-201ENST00000238379 ZC3H11AO75152 810 aaKnown RBP eCLIP16.43■□□□□ 0.22
HDHD3-201ENST00000238379 HMGCRP04035 888 aa16.43■□□□□ 0.22
HDHD3-201ENST00000238379 GNAT1P11488 350 aa16.43■□□□□ 0.22
HDHD3-201ENST00000238379 ANXA13P27216 316 aa16.43■□□□□ 0.22
HDHD3-201ENST00000238379 SURF1Q15526 300 aa16.43■□□□□ 0.22
HDHD3-201ENST00000238379 CCDC122Q5T0U0 273 aa16.43■□□□□ 0.22
HDHD3-201ENST00000238379 WDR49Q8IV35 697 aa16.43■□□□□ 0.22
HDHD3-201ENST00000238379 PPM1KQ8N3J5 372 aa16.43■□□□□ 0.22
HDHD3-201ENST00000238379 SYT11Q9BT88 431 aa16.43■□□□□ 0.22
HDHD3-201ENST00000238379 TRIP12Q14669 1992 aaPredicted RBP16.43■□□□□ 0.22
HDHD3-201ENST00000238379 SCN10AQ9Y5Y9 1956 aa16.43■□□□□ 0.22
HDHD3-201ENST00000238379 ERLIN2O94905 339 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 GNRH1P01148 92 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 HLA-DRAP01903 254 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 MAGEA1P43355 309 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 AP3M2P53677 418 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 OSTNP61366 133 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 BIRC3Q13489 604 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 TMEM192Q8IY95 271 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 KLHDC9Q8NEP7 349 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 OLIG1Q8TAK6 271 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 TATDN2Q93075 761 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 PI4K2AQ9BTU6 479 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.42■□□□□ 0.22
HDHD3-201ENST00000238379 GUCA1BQ9UMX6 200 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 GINS2Q9Y248 185 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 KRT86O43790 486 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 CCDC172P0C7W6 258 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 DARSP14868 501 aaKnown RBP16.42■□□□□ 0.22
HDHD3-201ENST00000238379 FGFR4P22455 802 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 MFAP3P55082 362 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 KIF5AQ12840 1032 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 NBPF20Q3BBV1 942 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 CCSAPQ6IQ19 270 aaPredicted RBP16.42■□□□□ 0.22
HDHD3-201ENST00000238379 PXYLP1Q8TE99 480 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 SHC3Q92529 594 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 ELMO3Q96BJ8 720 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 OSMRQ99650 979 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 MYO1AQ9UBC5 1043 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 DUSP10Q9Y6W6 482 aa16.42■□□□□ 0.22
HDHD3-201ENST00000238379 PJA2O43164 708 aa16.41■□□□□ 0.22
HDHD3-201ENST00000238379 B4GALT4O60513 344 aa16.41■□□□□ 0.22
HDHD3-201ENST00000238379 CLTAP09496 248 aa16.41■□□□□ 0.22
HDHD3-201ENST00000238379 STAG3L1P0CL83 205 aa16.41■□□□□ 0.22
HDHD3-201ENST00000238379 HOXA11P31270 313 aaPredicted RBP16.41■□□□□ 0.22
HDHD3-201ENST00000238379 PIK3CAP42336 1068 aa16.41■□□□□ 0.22
HDHD3-201ENST00000238379 POU5F1Q01860 360 aaKnown RBP16.41■□□□□ 0.22
HDHD3-201ENST00000238379 GCNT1Q02742 428 aa16.41■□□□□ 0.22
HDHD3-201ENST00000238379 ZNF569Q5MCW4 686 aa16.41■□□□□ 0.22
HDHD3-201ENST00000238379 FAM71AQ8IYT1 594 aa16.41■□□□□ 0.22
HDHD3-201ENST00000238379 NME8Q8N427 588 aa16.41■□□□□ 0.22
HDHD3-201ENST00000238379 FAM212AQ96EL1 285 aa16.41■□□□□ 0.22
HDHD3-201ENST00000238379 RPF1Q9H9Y2 349 aaKnown RBP16.41■□□□□ 0.22
HDHD3-201ENST00000238379 GTF2IRD1Q9UHL9 959 aa16.41■□□□□ 0.22
HDHD3-201ENST00000238379 NENFQ9UMX5 172 aa16.41■□□□□ 0.22
HDHD3-201ENST00000238379 PCNTO95613 3336 aa16.41■□□□□ 0.22
HDHD3-201ENST00000238379 DDX3XO00571 662 aaKnown RBP eCLIP16.4■□□□□ 0.221e-7■■■■■ 37.2
HDHD3-201ENST00000238379 MEFVO15553 781 aaPredicted RBP16.4■□□□□ 0.22
HDHD3-201ENST00000238379 CXCL8P10145 99 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 EIF4BP23588 611 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms