RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CPNE8Q86YQ8 564 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 SAMD3Q8N6K7 520 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 C7orf43Q8WVR3 580 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 CCDC127Q96BQ5 260 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 MFSD14AQ96MC6 490 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 FBXL18Q96ME1 805 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 GEMIN8Q9NWZ8 242 aaKnown RBP14.24□□□□□ -0.13
SRP54-201ENST00000216774 RAB20Q9NX57 234 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 CLRN2A0PK11 232 aa14.23□□□□□ -0.13
SRP54-201ENST00000216774 NFIBO00712 420 aa14.23□□□□□ -0.13
SRP54-201ENST00000216774 VIMP08670 466 aaKnown RBP14.23□□□□□ -0.13
SRP54-201ENST00000216774 DLATP10515 647 aaKnown RBP14.23□□□□□ -0.13
SRP54-201ENST00000216774 CNGA1P29973 690 aa14.23□□□□□ -0.13
SRP54-201ENST00000216774 SFNP31947 248 aa14.23□□□□□ -0.13
SRP54-201ENST00000216774 SLC1A1P43005 524 aa14.23□□□□□ -0.13
SRP54-201ENST00000216774 JAK3P52333 1124 aa14.23□□□□□ -0.13
SRP54-201ENST00000216774 MRPS9P82933 396 aaKnown RBP14.23□□□□□ -0.13
SRP54-201ENST00000216774 GCNT1Q02742 428 aa14.23□□□□□ -0.13
SRP54-201ENST00000216774 PTK6Q13882 451 aa14.23□□□□□ -0.13
SRP54-201ENST00000216774 FAM102BQ5T8I3 360 aa14.23□□□□□ -0.13
SRP54-201ENST00000216774 FKBP1CQ5VVH2 108 aa14.23□□□□□ -0.13
SRP54-201ENST00000216774 EXOC3L1Q86VI1 746 aa14.23□□□□□ -0.13
SRP54-201ENST00000216774 CCDC25Q86WR0 208 aa14.23□□□□□ -0.13
SRP54-201ENST00000216774 UHMK1Q8TAS1 419 aaKnown RBP14.23□□□□□ -0.13
SRP54-201ENST00000216774 GRK7Q8WTQ7 553 aa14.23□□□□□ -0.13
SRP54-201ENST00000216774 SNF8Q96H20 258 aa14.23□□□□□ -0.13
SRP54-201ENST00000216774 CDC42EP4Q9H3Q1 356 aaKnown RBP14.23□□□□□ -0.13
SRP54-201ENST00000216774 CD248Q9HCU0 757 aa14.23□□□□□ -0.13
SRP54-201ENST00000216774 GPRC5CQ9NQ84 441 aa14.23□□□□□ -0.13
SRP54-201ENST00000216774 AVENQ9NQS1 362 aaPredicted RBP14.23□□□□□ -0.13
SRP54-201ENST00000216774 AAASQ9NRG9 546 aa14.23□□□□□ -0.13
SRP54-201ENST00000216774 ZNF219Q9P2Y4 722 aaPredicted RBP14.23□□□□□ -0.13
SRP54-201ENST00000216774 ZC3H11AO75152 810 aaKnown RBP eCLIP14.22□□□□□ -0.137e-8■□□□□ 9.3
SRP54-201ENST00000216774 MYBL1P10243 752 aa14.22□□□□□ -0.13
SRP54-201ENST00000216774 DMP1Q13316 513 aaPredicted RBP14.22□□□□□ -0.13
SRP54-201ENST00000216774 DLGAP5Q15398 846 aa14.22□□□□□ -0.13
SRP54-201ENST00000216774 SPDYE2Q495Y8 402 aa14.22□□□□□ -0.13
SRP54-201ENST00000216774 TAS1R2Q8TE23 839 aa14.22□□□□□ -0.13
SRP54-201ENST00000216774 TRIM11Q96F44 468 aa14.22□□□□□ -0.13
SRP54-201ENST00000216774 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.22□□□□□ -0.131e-8■■■■■ 51.2
SRP54-201ENST00000216774 MGRN1O60291 552 aa14.22□□□□□ -0.13
SRP54-201ENST00000216774 TCEA3O75764 348 aa14.22□□□□□ -0.13
SRP54-201ENST00000216774 GAS8O95995 478 aa14.22□□□□□ -0.13
SRP54-201ENST00000216774 MAPK4P31152 587 aa14.22□□□□□ -0.13
SRP54-201ENST00000216774 NPTX2P47972 431 aa14.22□□□□□ -0.13
SRP54-201ENST00000216774 UGCGQ16739 394 aa14.22□□□□□ -0.13
SRP54-201ENST00000216774 PREPLQ4J6C6 727 aaPredicted RBP14.22□□□□□ -0.13
SRP54-201ENST00000216774 RSBN1LQ6PCB5 846 aaPredicted RBP14.22□□□□□ -0.13
SRP54-201ENST00000216774 NSMFQ6X4W1 530 aa14.22□□□□□ -0.13
SRP54-201ENST00000216774 SPIRE2Q8WWL2 714 aa14.22□□□□□ -0.13
SRP54-201ENST00000216774 SAAL1Q96ER3 474 aa14.22□□□□□ -0.13
SRP54-201ENST00000216774 ELAC2Q9BQ52 826 aaKnown RBP14.22□□□□□ -0.13
SRP54-201ENST00000216774 ASIC3Q9UHC3 531 aa14.22□□□□□ -0.13
SRP54-201ENST00000216774 ANAPC7Q9UJX3 599 aa14.22□□□□□ -0.13
SRP54-201ENST00000216774 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.22□□□□□ -0.13
SRP54-201ENST00000216774 PSME4Q14997 1843 aa14.21□□□□□ -0.13
SRP54-201ENST00000216774 WDR64B1ANS9 1081 aa14.21□□□□□ -0.13
SRP54-201ENST00000216774 ATP2C2O75185 946 aa14.21□□□□□ -0.13
SRP54-201ENST00000216774 TTC4O95801 387 aa14.21□□□□□ -0.13
SRP54-201ENST00000216774 ASNSP08243 561 aa14.21□□□□□ -0.13
SRP54-201ENST00000216774 MAP2K2P36507 400 aa14.21□□□□□ -0.13
SRP54-201ENST00000216774 KRT76Q01546 638 aa14.21□□□□□ -0.13
SRP54-201ENST00000216774 CYP24A1Q07973 514 aa14.21□□□□□ -0.13
SRP54-201ENST00000216774 XKR9Q5GH70 373 aa14.21□□□□□ -0.13
SRP54-201ENST00000216774 WLSQ5T9L3 541 aa14.21□□□□□ -0.13
SRP54-201ENST00000216774 MSL1Q68DK7 614 aa14.21□□□□□ -0.13
SRP54-201ENST00000216774 TRPM8Q7Z2W7 1104 aa14.21□□□□□ -0.13
SRP54-201ENST00000216774 ZNF677Q86XU0 584 aa14.21□□□□□ -0.13
SRP54-201ENST00000216774 SYTL5Q8TDW5 730 aaPredicted RBP14.21□□□□□ -0.13
SRP54-201ENST00000216774 C1orf54Q8WWF1 131 aa14.21□□□□□ -0.13
SRP54-201ENST00000216774 MYCBPQ99417 103 aaPredicted RBP14.21□□□□□ -0.13
SRP54-201ENST00000216774 NTPCRQ9BSD7 190 aaKnown RBP14.21□□□□□ -0.13
SRP54-201ENST00000216774 DDX23Q9BUQ8 820 aaKnown RBP14.21□□□□□ -0.13
SRP54-201ENST00000216774 CCDC113Q9H0I3 377 aa14.21□□□□□ -0.13
SRP54-201ENST00000216774 C17orf75Q9HAS0 396 aa14.21□□□□□ -0.13
SRP54-201ENST00000216774 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.21□□□□□ -0.13
SRP54-201ENST00000216774 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.21□□□□□ -0.13
SRP54-201ENST00000216774 DENND3A2RUS2 1198 aa14.21□□□□□ -0.14
SRP54-201ENST00000216774 TMEM150BA6NC51 233 aa14.21□□□□□ -0.14
SRP54-201ENST00000216774 SNX3O60493 162 aa14.21□□□□□ -0.14
SRP54-201ENST00000216774 OAS1P00973 400 aaKnown RBP14.21□□□□□ -0.14
SRP54-201ENST00000216774 UNGP13051 313 aaPredicted RBP14.21□□□□□ -0.14
SRP54-201ENST00000216774 IVDP26440 423 aa14.21□□□□□ -0.14
SRP54-201ENST00000216774 IFNAR2P48551 515 aa14.21□□□□□ -0.14
SRP54-201ENST00000216774 PTP4A2Q12974 167 aa14.21□□□□□ -0.14
SRP54-201ENST00000216774 LONRF1Q17RB8 773 aa14.21□□□□□ -0.14
SRP54-201ENST00000216774 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.21□□□□□ -0.14
SRP54-201ENST00000216774 ARHGEF2Q92974 986 aaKnown RBP14.21□□□□□ -0.14
SRP54-201ENST00000216774 POP1Q99575 1024 aaKnown RBP14.21□□□□□ -0.14
SRP54-201ENST00000216774 SH2D3AQ9BRG2 576 aa14.21□□□□□ -0.14
SRP54-201ENST00000216774 GLIS2Q9BZE0 524 aaPredicted RBP14.21□□□□□ -0.14
SRP54-201ENST00000216774 MTFR1LQ9H019 292 aa14.21□□□□□ -0.14
SRP54-201ENST00000216774 TCEAL9Q9UHQ7 104 aa14.21□□□□□ -0.14
SRP54-201ENST00000216774 RGPD3A6NKT7 1758 aaPredicted RBP14.21□□□□□ -0.14
SRP54-201ENST00000216774 RGPD4Q7Z3J3 1758 aa14.21□□□□□ -0.14
SRP54-201ENST00000216774 CFAP73A6NFT4 308 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 ACSL3O95573 720 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 SCP2P22307 547 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 SLC8A1P32418 973 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 CENPCQ03188 943 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms