RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Krt85Q9Z2T6 507 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Pard3Q99NH2 1333 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Patl2A2ARM1 529 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 LexmA2AVQ5 414 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 DgkhD3YXJ0 1156 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ap1arE9PYF7 298 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Rnaseh1O70338 285 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 CtssO70370 340 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Fgf18O89101 207 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 LdhcP00342 332 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Nos2P29477 1144 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 LtbrP50284 415 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Mnat1P51949 309 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Map3k7clP58500 142 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Vbp1P61759 196 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Fbxo40P62932 710 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Cbx1P83917 185 aaKnown RBP9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Adcy5P84309 1262 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Eya3P97480 510 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Mtus1Q5HZI1 1210 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Myo1dQ5SYD0 1006 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Kpna1Q60960 538 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Cfap206Q6PE87 622 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Atp1a3Q6PIC6 1013 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Akap7Q7TN79 314 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 B430218F22RikQ8BQR5 223 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Mpp7Q8BVD5 576 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 SucoQ8C341 1250 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Trim60Q8VI40 466 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Usb1Q91W78 267 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Pcdhb2Q91Y00 799 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Kif17Q99PW8 1038 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 MtrexQ9CZU3 1040 aaKnown RBP9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Arl5bQ9D4P0 179 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Polr2dQ9D7M8 142 aaKnown RBP9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Tacc2Q9JJG0 1149 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ehd3Q9QXY6 535 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Net1Q9Z206 595 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Zfp408H7BX78 710 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Cyp8b1O88962 500 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Apoa4P06728 395 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Rab12P35283 243 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 PtpreP49446 699 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Cdkn1cP49919 348 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ptpdc1Q6NZK8 747 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 RhovQ8VDU1 236 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Cxxc5Q91WA4 317 aaKnown RBP9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Dr1Q91WV0 176 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Sun1Q9D666 913 aaKnown RBP9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Srpk3Q9Z0G2 565 aa9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Stau1Q9Z108 487 aaKnown RBP9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Tnrc6cQ3UHC0 1690 aaKnown RBP9.73□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Cyp4a29A0A087WPC3 509 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Gm42421F6X8D5 166 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Cyp4a14O35728 507 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 CfbP04186 761 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Tyrp1P07147 537 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Hsd3b1P24815 373 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Pcnx4Q3UVY5 1174 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 CbarpQ66L44 698 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Kmt5cQ6Q783 468 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Gpt2Q8BGT5 522 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Sept10Q8C650 452 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Cplx3Q8R1B5 158 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Tmigd1Q9D7L8 261 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Rnf103Q9R1W3 683 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Tet3Q8BG87 1668 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Hoxa9P09631 271 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Mylk3Q3UIZ8 795 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Actr3bQ641P0 418 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 SepsecsQ6P6M7 504 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Slu7Q8BHJ9 585 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Man2a2Q8BRK9 1152 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Gjd4Q8BSD4 364 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 NcaphQ8C156 731 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ahi1Q8K3E5 1047 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Eif3cQ8R1B4 911 aaKnown RBP9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 SfpqQ8VIJ6 699 aaKnown RBP9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Cyp4f15Q99N18 534 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ndufab1Q9CR21 156 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Psma8Q9CWH6 250 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Tuba8Q9JJZ2 449 aa9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Uso1Q9Z1Z0 959 aaKnown RBP9.72□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Gm6583E9Q8Z1 469 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ccdc149F6V035 524 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Itgb1P09055 798 aaKnown RBP9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Hnf1bP27889 558 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 StamP70297 548 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ezh1P70351 747 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Yy1Q00899 414 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Cpne7Q0VE82 557 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Fbxo31Q3TQF0 507 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Fam198bQ3UPI1 517 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Osbp2Q5QNQ6 908 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Sun3Q5SS91 320 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ntan1Q64311 310 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Magee1Q6PCZ4 918 aaKnown RBP9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Larp1Q6ZQ58 1072 aaKnown RBP9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Trim56Q80VI1 734 aaKnown RBP9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Tmem106cQ80VP8 260 aa9.71□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms