RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Ttc8Q8VD72 515 aa8.66□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 NgrnQ99KS2 293 aaKnown RBP8.66□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Wdr64Q9D565 1086 aa8.66□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 H2afyQ9QZQ8 372 aaKnown RBP8.66□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 TinagQ9WUR0 475 aa8.66□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Uba2Q9Z1F9 638 aa8.66□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Nhsl1Q8CAF4 1587 aa8.65□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Abcc10Q8R4P9 1501 aa8.65□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Gm16486A0A1D5RMD1 1434 aa8.65□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Krtap3-1A2A591 98 aa8.65□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 2310050C09RikG5E8Z3 280 aa8.65□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Snap23O09044 210 aa8.65□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Pmm1O35621 262 aa8.65□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Ftl1P29391 183 aa8.65□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Zdhhc9P59268 364 aa8.65□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Sec24aQ3U2P1 1090 aa8.65□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Snx33Q4VAA7 574 aa8.65□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Rnf187Q8BFX1 236 aa8.65□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Tmem74Q8BQU7 305 aa8.65□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Fmo4Q8VHG0 560 aa8.65□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Nlgn1Q99K10 843 aa8.65□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Ubxn11Q9D572 484 aa8.65□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Fbxo16Q9QZM9 334 aa8.65□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 B3galt4Q9Z0F0 371 aa8.65□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Ly6g6dQ9Z1Q3 135 aa8.65□□□□□ -1.02
Ccdc54-201ENSMUST00000062439 Mon2Q80TL7 1715 aa8.65□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Kif24Q6NWW5 1356 aa8.64□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Rbm8a2A0A0N4SUH6 174 aa8.64□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Zbtb34A2ATY4 518 aa8.64□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 GaaP70699 953 aa8.64□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Mocs1Q5RKZ7 636 aa8.64□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Tbc1d5Q80XQ2 815 aa8.64□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Hs3st3a1Q8BKN6 393 aa8.64□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Kat5Q8CHK4 513 aa8.64□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Glb1lQ8VC60 646 aa8.64□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Rbm8aQ9CWZ3 174 aa8.64□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Tstd3Q9D0B5 157 aa8.64□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Slit2Q9R1B9 1521 aa8.64□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Ahnak2E9PYB0 1738 aaKnown RBP8.63□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Siglec1Q62230 1695 aa8.63□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Tcp10bE9PYJ0 438 aa8.63□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 CtgfP29268 348 aa8.63□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Tdrd5Q5VCS6 1040 aa8.63□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Kcna6Q61923 529 aa8.63□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Frmd5Q6P5H6 517 aa8.63□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Nap1l4Q78ZA7 375 aaKnown RBP8.63□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Slc14a2Q8R4T9 930 aa8.63□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Lmcd1Q8VEE1 365 aa8.63□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Dcaf11Q91VU6 549 aa8.63□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Pcyt2Q922E4 404 aa8.63□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Prpf3Q922U1 683 aaKnown RBP8.63□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Triap1Q9D8Z2 76 aa8.63□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Tmem8aQ9ESN3 769 aa8.63□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Plcb1Q9Z1B3 1216 aa8.63□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Adgrl1Q80TR1 1466 aa8.63□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Tmem2Q5FWI3 1383 aa8.62□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Rap1gapA2ALS5 663 aa8.62□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Rhox3fA2ANE1 215 aa8.62□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 IkbkbO88351 757 aa8.62□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 B4galt1P15535 399 aa8.62□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 TekQ02858 1122 aa8.62□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Fbln1Q08879 705 aa8.62□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Lmf1Q3U3R4 574 aa8.62□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Ceacam10Q61400 265 aa8.62□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Fnip1Q68FD7 1165 aa8.62□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Prr11Q8BHE0 368 aa8.62□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Noc4lQ8BHY2 516 aa8.62□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Mtfr2Q8VED8 361 aa8.62□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Olfr356Q8VFP5 315 aa8.62□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Farp2Q91VS8 1065 aa8.62□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Pcdhga4Q91XY4 930 aa8.62□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Phf2Q9WTU0 1096 aa8.62□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 NktrP30415 1453 aa8.62□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 BC025446A0A087WQT1 134 aa8.61□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Map7O88735 730 aa8.61□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Slc6a11P31650 627 aa8.61□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Wdr70Q3TWF6 657 aa8.61□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Clul1Q3ZRW6 464 aa8.61□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Rhox12Q4TU81 186 aa8.61□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 LcorQ6ZPI3 433 aa8.61□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Nol11Q8BJW5 723 aaKnown RBP8.61□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Efemp1Q8BPB5 493 aa8.61□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Cfap20Q8BTU1 193 aa8.61□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Ano4Q8C5H1 955 aa8.61□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Elmod3Q91YP6 381 aa8.61□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Fam111aQ9D2L9 613 aa8.61□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Abca15E9PWH4 1668 aa8.61□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Nrxn1Q9CS84 1514 aa8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Pola1P33609 1465 aa8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Atp7bQ64446 1462 aa8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 1700017N19RikA0A087WPJ1 469 aa8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 AgmatA2AS89 358 aa8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Krt28A6BLY7 462 aa8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 8030474K03RikE9Q4Y8 554 aa8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 P06330 118 aa8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 IvlP48997 467 aa8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Olfr125Q14AJ9 320 aa8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Zc3h12aQ5D1E7 596 aa8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Drc7Q6V3W6 876 aa8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Coro2bQ8BH44 480 aa8.6□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms