RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Wdr49A0A0N4SUK7 710 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 CraddO88843 199 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 PolgP54099 1218 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Ankmy2Q3TPE9 440 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Lig4Q8BTF7 911 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Vps50Q8CI71 964 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Coro7Q9D2V7 922 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Tex44Q9DA60 530 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Gm3460E9QAI8 215 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 NpeppsQ11011 920 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Kcna4Q61423 654 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 AlcamQ61490 583 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Rhot1Q8BG51 631 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Pglyrp2Q8VCS0 530 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 MbipQ99LQ1 341 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Tlr3Q99MB1 905 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Stau1Q9Z108 487 aaKnown RBP16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Gm5483B2RV77 97 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Tph1P17532 447 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Spag6Q3V0U9 509 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Hspa1aQ61696 641 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 TdrkhQ80VL1 560 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Vmn1r214Q8R279 367 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 TbccQ8VCN9 341 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Ncoa3O09000 1398 aa16.48■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Talpid3E9PV87 1520 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Dsg3O35902 993 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Xxylt1Q3U4G3 392 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Ddx5Q61656 614 aaKnown RBP16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Slc24a3Q99PD7 645 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Sike1Q9CPR7 207 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Tmprss15P97435 1069 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Slc9a1Q61165 820 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Zhx3Q8C0Q2 951 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Atg14Q8CDJ3 492 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Kdm6aO70546 1401 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 4930444G20RikD3Z741 495 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 SprtnG3X912 497 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Ctnnal1O88327 731 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Abcb1bP06795 1276 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Arf5P84084 180 aaKnown RBP16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Trim72Q1XH17 477 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Mcf2lQ64096 1149 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Morc2bQ8C5W4 1022 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Lpin2Q99PI5 893 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Mzt2Q9CQ25 159 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Arhgef7Q9ES28 862 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Slfn2Q9Z0I6 378 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Hmgxb3G3X9M3 1254 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Nme5Q99MH5 211 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Fthl17aQ9DAX0 182 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Ndufa13Q9ERS2 144 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Sucla2Q9Z2I9 463 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 PtproE9Q612 1226 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Kcnn2P58390 839 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Mcl1P97287 331 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Atl2Q6PA06 583 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Rd3Q8BRE0 195 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Hat1Q8BY71 416 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Agap3Q8VHH5 910 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Rasgrp1Q9Z1S3 795 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Prrc2bQ7TPM1 1486 aaKnown RBP16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Eif3eP60229 445 aaKnown RBP16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Gtpbp6Q3U6U5 514 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Kdm7aQ3UWM4 940 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 HmcesQ8R1M0 353 aaKnown RBP16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Asap1Q9QWY8 1147 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 AatkQ80YE4 1365 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Klhl18A0A0G2JGN5 579 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Cdc27A2A6Q5 825 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Morc3F7BJB9 942 aaKnown RBP16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Plekha8Q80W71 519 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Spag16Q8K450 639 aa16.47■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Fam81bA0A140LI28 432 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Fam47eD3YWC7 402 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Soat2O88908 525 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 RaraP11416 462 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Cdh2P15116 906 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Vipas39Q8BGQ1 491 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Dclre1bQ8C7W7 541 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Tesk2Q8VCT9 570 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Mrps15Q9DC71 258 aaKnown RBP16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Elac2Q80Y81 831 aaKnown RBP16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Ttc39bQ8BYY4 617 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Gm5814J3QP80 125 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Exoc4O35382 975 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Mybl1P51960 751 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Tmem247Q497K7 211 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Ccdc85aQ5SP85 500 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Alkbh8Q80Y20 664 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Cadps2Q8BYR5 1297 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Pcdhb11Q91UZ8 797 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Sema4dO09126 861 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Adcy1O88444 1118 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Serpina1cQ00896 412 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Serpina1dQ00897 413 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Tmem120bQ3TA38 339 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Rnpc3Q3UZ01 514 aaKnown RBP16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Trim45Q6PFY8 580 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Rbbp8Q80YR6 893 aa16.46■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms